Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq10 178 2e-39
seq25 100 4e-16
>seq10
Length=2758267
Score = 178 bits (196), Expect = 2e-39
Identities = 607/931 (65%), Gaps = 19/931 (2%)
Strand=Plus/Plus
Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289
|| ||||| | || |||| ||||| || ||| ||| || | | |||||| | |
Sbjct 2184405 GGCAGGGCCAGCGAGGCCAGGTTGCAGACGGCCACCTCGTCGGGGGCAGAGTACTCGACA 2184464
Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349
|| || || || | |||||| || || || |||| ||||| ||||| ||||| |
Sbjct 2184465 ATCTCGGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGG 2184524
Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409
||||| ||||||||||||||| |||| | |||||||| ||||| | | ||| ||
Sbjct 2184525 TTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTACCCGTCTCGGTCTGGGCCTCGAGGATC 2184584
Query 111410 GCCTTCCA-AACATC-GGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACT 111467
| | ||| | | || || || | | | ||| | | || |||||| ||||||||
Sbjct 2184585 GAGTACCACAGCTTCTGGGCGCGGATCGTCTTGCG--GCCGCGGCCCTCCCTCTCGTACT 2184642
Query 111468 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTG 111527
| ||| || || |||||||| || || |||||| || || || || || |
Sbjct 2184643 TCTCGTACAGAGCCTCAAACTCGTCGCCGTGGACGTCGGCCAGGCCGGGGCACTCGTTGG 2184702
Query 111528 GACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 111587
| || | || | ||| | || | ||| || ||||||||||| ||||| |||||||
Sbjct 2184703 GGCACATGAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCC 2184762
Query 111588 ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACT 111647
| |||| || || || | || |||| || | ||| ||||| || | |
Sbjct 2184763 AGAGGGCGAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTGCGGAGGT 2184822
Query 111648 CAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC-GATAGATCC---- 111702
| |||||||| | || ||| |||||||| ||||| || |||| ||| || | ||
Sbjct 2184823 CGAGGAACTCAAAGACATCGGCGTGCCAGGGCTCGAGGTAGA-TGCAGAAGGCACCGGGG 2184881
Query 111703 CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 111762
| | | | ||| | || | || ||||| || ||| ||| | || || ||||| ||
Sbjct 2184882 CGCTTGTTG-CCACCCTGGTCGACGTAGCGGGCCGTGTTGTTGTAGACACGCAGCATGGG 2184940
Query 111763 AATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC 111822
|| || || | || ||| || || || ||| || |||| | |
Sbjct 2184941 GATGATGCCGTTGGAGGTACCGTTGGTACCGGCAATGTAGGAGCCCGTGGCACGGATGCG 2185000
Query 111823 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 111882
|||| || | ||||| || || ||| ||| ||||| |||||| | | || ||
Sbjct 2185001 GTGGACGTTGAGGCCAATGCCACCGGCCGTCTTGGAGATCATGGCACACGTCTTGAGGGT 2185060
Query 111883 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 111942
| ||||| || | ||| ||| |||||| || ||| |||||||| |||| |||
Sbjct 2185061 GTCGTAGATGCCATCGATGCTGTCGTCCTTGATGTCGACGAGGAAGCACGACGACAGCTG 2185120
Query 111943 CGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGG 112000
|| || || ||||| || ||||||||||| || | ||||| |||| ||| | | |
Sbjct 2185121 -GGCCTGGGGGGTACCGGCGTTGAAGAGGGTGGGGGAGGCGTGGGTGAA-GTACTTGTTG 2185178
Query 112001 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCG 112060
||||| || ||| ||||| | |||| |||| || || || |||||||| |||
Sbjct 2185179 GACATGAGGTTGTACGTCTCAATGACACGCTCAACGTTGTCACCCCAGATGCCGACGGCG 2185238
Query 112061 ACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA--AGAT 112118
|| ||||| | ||||| ||| ||| || | | |||| | |||| |||| || |
Sbjct 2185239 ACACGCATAATCATGTGCTGGGGGCGCTCGACAATCTTGCCGTTGAGC--TTGAGCAGGT 2185296
Query 112119 AGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149
|| ||| ||||| |||| ||||||||
Sbjct 2185297 AGGAGCGCTCGAGGGTCTTGAAGCCAAAGTA 2185327
>seq25
Length=1334681
Score = 100 bits (110), Expect = 4e-16
Identities = 301/463 (65%), Gaps = 30/463 (6%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
|| || ||||| ||||||||||||||||||||||| || | ||| ||||| |||||
Sbjct 1180478 TACTCGCCGACGCGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATG 1180419
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 122484
||||| || || || | || || | | | | || | | | || |||
Sbjct 1180418 AAGTCGAAGGGGTTGGTGGCATTGTAGACCTTCTCGTTGCCGAGGGCGACA------AGG 1180365
Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGG 122544
|| ||||| | ||| |||||||||||| ||| | |||||| |||| |||
Sbjct 1180364 AGGCGATCGGCGACAAACTCAATGTACTGCTGCATGAGGGAGGCGTTCATGCCGAGTAGG 1180305
Query 122545 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 122604
|| || || ||||| || |||| | ||||| |||| || || || | | |||
Sbjct 1180304 GCGCAAGGCAGGGCGTCAGTGAGGAACTCCTTCTCGATCTTGACGGCGTCAGTGATGATC 1180245
Query 122605 GCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGC---TCCAC---- 122657
||||||| | | | ||| ||| | ||||| | || | ||
Sbjct 1180244 TCGTGGATGATCTGCTTGCTGG--------CGCGGTG-CTTGAGGTGCGAGTGCAGCAGG 1180194
Query 122658 --GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGA 122715
||| || || |||||||||||| || || ||||| || || || |||||| ||
Sbjct 1180193 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAAATGAGCTCGTTGGAGAAGGTCAGG 1180134
Query 122716 CCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAG 122775
|| ||||| ||||| |||||||| | ||| | || | | ||| | ||| |||||||
Sbjct 1180133 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCGCCGCTGAAGAAG 1180074
Query 122776 ATACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAgg 122818
|| ||||| || ||||| |||| ||||| | ||||||||
Sbjct 1180073 ATGCCCTCGACGGCAGCAAATGCAACCAGGCGCTGGGCGAAGG 1180031
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628029487872000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |