Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq10 129 2e-24
seq64 113 1e-19
seq56 95.1 4e-14
>seq10
Length=2758267
Score = 129 bits (142), Expect = 2e-24
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | | ||||| || || ||||| ||||| || ||||| || || ||
Sbjct 926601 CATACCACCGCGCAGACGGAGAACCAGGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTC 926542
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
| | || || ||||| || || || ||||| || || || || || ||||| || ||
Sbjct 926541 ACTCAGAGTACGGCCATCCTCGAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGG 926482
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| || || || || |||||||| || | || ||||| || || | ||| || | ||
Sbjct 926481 AGGGATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATAGTATCCGAAGACTC 926422
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || | ||||||||||| || || || ||||| ||||||||
Sbjct 926421 CACCTCGAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACAAAGATCTGCAT 926371
Score = 104 bits (114), Expect = 7e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| || || || || || || || || || || || || || || | || || || ||
Sbjct 926810 AGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCGTCC 926751
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| ||||| ||||| || || ||||| || || || |||
Sbjct 926750 TCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 926691
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
||||| || | || || || ||||| | || | ||| || ||||| || | |||
Sbjct 926690 TGAATCTTGGACTTGACGTTGTCAATGGTGTCGCTCGATTCCACCTCAAGCGTGATCGTC 926631
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || || || |||||||||||
Sbjct 926630 TTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 926599
Score = 89.7 bits (98), Expect = 2e-12
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||| ||||| | | || || || || ||||| ||| || || || || || ||
Sbjct 926145 CATACCTCCACGGAGGCGGAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTC 926086
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || || ||||| || || ||||| || || ||||| ||||| |||||
Sbjct 926085 GGAGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGG 926026
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| || || || ||||| || || | || || || || || | || || | ||
Sbjct 926025 AGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTC 925966
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713
|| ||||| || | ||||| || ||
Sbjct 925965 GACCTCAAGAGTGATGGTCTTGCCAGT 925939
>seq64
Length=1576225
Score = 113 bits (124), Expect = 1e-19
Identities = 477/746 (64%), Gaps = 17/746 (2%)
Strand=Plus/Minus
Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256
||||| | || ||||| || ||||| || || ||||| || | | | | | | || |
Sbjct 806071 CCGCTGTCGGTATCGACTTGGGTACCACGTACTCTTGCGTGGGTATCTTCCGTGAGGACC 806012
Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316
| || || ||||| || || || || ||| | || || || || | ||| || || |
Sbjct 806011 GCTGCGACATCATTGCCAACGACCAGGGCAACCGCACCACCCCCTCCTTCGTCGCCTTCA 805952
Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376
|||| ||||||||| | || |||||| | || || || || | || || || | |
Sbjct 805951 CCGACACTGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTGGCCATGAACCCCCAGA 805892
Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTT-----TTCTGACAAATCTA 349430
| || || || || || ||||| || || || | ||||| | |||| ||
Sbjct 805891 ACACCGTCTTCGACGCCAAGCGCCTCATCGGCCGCAAGTTCAGCGATGCTGAGG--TC-- 805836
Query 349431 CACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAA 349490
|| | || | || || || || || || |||| | | ||| |||| || || |
Sbjct 805835 --CAGGCCGACATGAAGCACTTCCCCTTCACCATTGT-CGAGAAG--GGTGGCAAGCCCA 805781
Query 349491 TTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAA 349550
|| |||| || | || || || || || || ||||| || ||||| || |
Sbjct 805780 CCATCCAGGTCGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCCGAGGAGATTTCCTCCA 805721
Query 349551 TGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATG 349610
|| | | || ||| || | ||| || || || | || | || || | |
Sbjct 805720 TGATCCTCACCAAGATGCGTGAGACTGCCGAGGCCTACCTTGGCGGCACCGTCCAGAACG 805661
Query 349611 CTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTG 349670
|||| | ||||| || ||||| || || || ||||||| || || || || || |
Sbjct 805660 CTGTCGTCACTGTCCCCGCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAGGACGCCG 805601
Query 349671 GCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTG 349730
| ||| || || | || || || | || || || || ||||| || || || ||||
Sbjct 805600 GTCTCATCGCCGGCCTCAACGTCCTGCGTATCATCAACGAGCCCACCGCCGCTGCCATTG 805541
Query 349731 CATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTG 349790
| || || ||||| || | || ||| || || |||| || || || | ||||
Sbjct 805540 CCTACGGTCTTGACAAGAAGATTGAGGGCGAGCGCAACGTTCTCATCTTCGACCTGGGTG 805481
Query 349791 GTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAA 349850
||||||| || ||||| || || || || | || ||||| || || || || || | |
Sbjct 805480 GTGGTACCTTCGATGTGTCGCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTCCA 805421
Query 349851 CTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTG 349910
| || ||||| || || || ||||| || || ||||| || || ||||| || || |
Sbjct 805420 CCGCCGGTGACACTCACCTGGGTGGTGAGGACTTTGACAACCGCCTCGTCAACCACTTCG 805361
Query 349911 TTAAAGAATTTAAGCGTCAAG-CTAA 349935
| ||||| ||||| |||| ||||
Sbjct 805360 TCGCTGAATTCAAGCG-CAAGTCTAA 805336
>seq56
Length=2470257
Score = 95.1 bits (104), Expect = 4e-14
Identities = 154/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567
||||||||||| | | || || || || || || ||||| || || || || || ||
Sbjct 880799 ATACCACCACGGAGGCGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCG 880740
Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627
|| | || || || || ||||| || ||||| || ||||| || || ||||| || ||
Sbjct 880739 GACAGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGG 880680
Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687
||||| || || || ||||| || || | || ||||| || || | || || | ||
Sbjct 880679 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCG 880620
Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729
|| || || || | ||||| || || || || || || |||
Sbjct 880619 ACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 880578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515248187456960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |