Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq10 96.9 2e-15
seq64 82.4 5e-11
>seq10
Length=2758267
Score = 96.9 bits (106), Expect = 2e-15
Identities = 151/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||| ||||| ||| ||||| || ||||| || || || || || || |||| ||
Sbjct 926807 ACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCGTCCTCG 926748
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| || ||||| ||||| || | |||||| |||||||| || | ||||||||||| ||
Sbjct 926747 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC-CTG 926689
Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTTT 34675
| || | || ||| | ||| ||||| ||| | ||||| || | || ||||| |
Sbjct 926688 AATCTTGGACTTGACGTTGTCAATGGTGTCGCTCGAT-TCCACCTCAAGCGTGATCGTCT 926630
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || || | ||| || || |||||||||||
Sbjct 926629 TGCCAGTGAGCGTCTTGACGAAAATCTGCAT 926599
Score = 89.7 bits (98), Expect = 3e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||||||||||||||| || ||||| || || || || || || |||| ||||| ||
Sbjct 926117 TGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCAAGCTGC 926058
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622
|| || || || || | |||||| ||||| || || | ||||||||||| ||||||
Sbjct 926057 TTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTT 925999
>seq64
Length=1576225
Score = 82.4 bits (90), Expect = 5e-11
Identities = 160/234 (68%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537
|||| || | || |||| ||||| ||||||||| |||||| || ||||| || ||
Sbjct 136473 CGCCACCACGCAGGCGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGC 136532
Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597
|| || || | || ||||| || || || || || || | ||||| |||||||| |
Sbjct 136533 TCAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGG 136592
Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656
| | ||||||||||| |||| || | || ||| | || ||||| ||||
Sbjct 136593 GGATACCCTCCTTGTCCTGGATC-TTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCC 136651
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
|| || | ||| || || || || || | || || || || |||||||| |||
Sbjct 136652 ACCTCGAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTTG 136705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314728372554560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |