Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06- 24] 320 sequences; 30,069,354 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq10 96.9 2e-15 seq64 82.4 5e-11 >seq10 Length=2758267 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||| ||||| ||| ||||| || ||||| || || || || || || |||| || Sbjct 926807 ACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCGTCCTCG 926748 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || ||||| ||||| || | |||||| |||||||| || | ||||||||||| || Sbjct 926747 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC-CTG 926689 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTTT 34675 | || | || ||| | ||| ||||| ||| | ||||| || | || ||||| | Sbjct 926688 AATCTTGGACTTGACGTTGTCAATGGTGTCGCTCGAT-TCCACCTCAAGCGTGATCGTCT 926630 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || | ||| || || ||||||||||| Sbjct 926629 TGCCAGTGAGCGTCTTGACGAAAATCTGCAT 926599 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||||||||||||||| || ||||| || || || || || || |||| ||||| || Sbjct 926117 TGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCAAGCTGC 926058 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || || || || || | |||||| ||||| || || | ||||||||||| |||||| Sbjct 926057 TTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTT 925999 >seq64 Length=1576225 Score = 82.4 bits (90), Expect = 5e-11 Identities = 160/234 (68%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | || |||| ||||| ||||||||| |||||| || ||||| || || Sbjct 136473 CGCCACCACGCAGGCGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGC 136532 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 || || || | || ||||| || || || || || || | ||||| |||||||| | Sbjct 136533 TCAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGG 136592 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | ||||||||||| |||| || | || ||| | || ||||| |||| Sbjct 136593 GGATACCCTCCTTGTCCTGGATC-TTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCC 136651 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || || | ||| || || || || || | || || || || |||||||| ||| Sbjct 136652 ACCTCGAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTTG 136705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728372554560