Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06- 24] 320 sequences; 30,069,354 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq64 93.3 4e-14 seq10 93.3 4e-14 >seq64 Length=1576225 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || ||| || || || | Sbjct 136486 GCGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCC 136545 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || |||||||| ||||| || || || || ||||||||||| | ||| | | ||| || Sbjct 136546 ATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTT 136605 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| || |||| ||| | | | || ||| |||||||| || | |||| Sbjct 136606 GTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGA 136664 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 || | || ||||| || || || || ||||| |||||||| Sbjct 136665 TAGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 136704 >seq10 Length=2758267 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || ||| || || || || || || || | || || || |||| || Sbjct 926807 ACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCGTCCTCG 926748 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || || ||||| ||||||||||||||||| | ||| | || ||| |||||| Sbjct 926747 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 926688 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || |||| ||| | | | || |||||||| ||||| || | |||||| | || Sbjct 926687 ATCTTGGACTTGA-CGTTGTCAATGGTGTCGCTCGATTCCACCTCAAGCGTGATCGTCTT 926629 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || ||||| || || || || ||||| Sbjct 926628 GCCAGTGAGCGTCTTGACGAAAATCTGCAT 926599 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||| ||| || || || || || ||| || || || | || |||||||| Sbjct 926345 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCAAGCTGC 926286 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || ||||| || || ||||||||||| | ||| | | ||| |||||| ||| || Sbjct 926285 TTTCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTG 926226 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | || || |||||| || || | ||||||| | || ||||| Sbjct 926225 CTCTTGA-CGTTGTCGATGGTGTCCGACGACTCGACCTCGAGCGTGATAGTCTTACCCGT 926167 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 ||| || || || ||||| ||||| Sbjct 926166 CAGGGTCTTGACGAAGATCTGCAT 926143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429543924772160