Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq64 149 1e-30
seq56 136 9e-27
seq10 134 3e-26
seq55 129 1e-24
>seq64
Length=1576225
Score = 149 bits (164), Expect = 1e-30
Identities = 168/225 (75%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||| || |||||||||||||| || || |||| ||||| ||| || |||
Sbjct 136480 ACGCAGGCGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGT 136539
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| ||||||||||| || || || ||||| || || |||||
Sbjct 136540 GCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACC 136599
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| || ||||||||||| || | ||||| || |
Sbjct 136600 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAG 136659
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| ||||| | || || | ||| | ||||| ||
Sbjct 136660 GGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 136704
>seq56
Length=2470257
Score = 136 bits (150), Expect = 9e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || || || || || |||| ||||| |||| || || | || ||
Sbjct 880781 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 880722
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||| || ||||| || ||||||||
Sbjct 880721 TCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 880662
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| |||| || || || | ||||| |||
Sbjct 880661 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 880602
Query 225682 TTGCCCGTCAAAGTTTTTATGAA 225704
|||||||||| || || | |||
Sbjct 880601 TTGCCCGTCAGGGTCTTCACGAA 880579
>seq10
Length=2758267
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| |||||||| || |||| ||||| || | || || | || ||
Sbjct 926810 AGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCGTCC 926751
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| |||||||| || || ||||| || ||||| || ||||||||
Sbjct 926750 TCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 926691
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| || || |||||||| | |||||| || | ||||||||||
Sbjct 926690 TGAATCTTGGACTTGACGTTGTCAATGGTGTCGCTCGATTCCACCTCAAGCGTGATCGTC 926631
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | || || | ||| | |||||
Sbjct 926630 TTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 926599
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || || || || || |||| ||||| ||| || ||| | |||||
Sbjct 926354 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCC 926295
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || || || ||||| || || ||||| ||||||||
Sbjct 926294 TCAAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 926235
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || | || || || | |||||| |||
Sbjct 926234 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGCGTGATAGTC 926175
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||||| || || | ||| | |||||
Sbjct 926174 TTACCCGTCAGGGTCTTGACGAAGATCTGCAT 926143
Score = 123 bits (136), Expect = 6e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||||||| || || |||| ||||| |||| | || | || ||
Sbjct 926126 AGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCC 926067
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| |||||||| || || || || ||||| || ||||| || ||||||||
Sbjct 926066 TCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 926007
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| |||| || || || | ||||| |||
Sbjct 926006 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTC 925947
Query 225682 TTGCCCGT 225689
||||| ||
Sbjct 925946 TTGCCAGT 925939
>seq55
Length=23587
Score = 129 bits (142), Expect = 1e-24
Identities = 200/285 (70%), Gaps = 3/285 (1%)
Strand=Plus/Minus
Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500
|| |||||||||||||||| || |||||| | ||||||| ||| ||| | |
Sbjct 21889 ACATTATATTTAATATTTGCCTTATTCTCTGGTTTATTAGGTACAGCATTCTCTGTATTA 21830
Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTAC 7560
||||| | |||||| || || ||| |||| || | | ||| | |||| | | |
Sbjct 21829 ATAAGAATGGAATTAAGTGGACCAGGTGTTCAA---TTTATTTCTAACAACCAATTATTC 21773
Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620
|| ||| |||| || || || || | ||||||||||| | |||||||| | |
Sbjct 21772 AATAGTATAGTTACAGCTCACGCTATTTTAATGATTTTCTTCATGGTTATGCCAGCCTTA 21713
Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680
||||| |||||||| || | || | ||||||||| | || | ||| |||||||| ||
Sbjct 21712 ATAGGTGGTTTCGGTAACTTCTTAATGCCTTTAATGGTAGGAGGTCCGGATATGGCATTC 21653
Query 7681 CCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725
|| || | ||||| || ||||| |||||| |||| ||||| |||
Sbjct 21652 CCTAGATTAAACAACATTAGTTTCTGATTATTACCACCTTCTTTA 21608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192526310622080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |