Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq10 167 2e-36
seq56 150 2e-31
seq64 149 6e-31
seq5 84.2 2e-11
>seq10
Length=2758267
Score = 167 bits (184), Expect = 2e-36
Identities = 176/229 (77%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || || || | ||||| || || ||| |||||||| ||||| ||||| ||
Sbjct 926826 GCCACCCCGCAGGCGGAGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCCGA 926767
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||||| |||| ||||||||||| || || || || || ||||| ||||||| |||
Sbjct 926766 CAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGG 926707
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| || |||||||||| ||| | || | | ||| | | | ||||||||||| ||||
Sbjct 926706 AATGCCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCAATGGTGTCGCTCGATTCCA 926648
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | ||| ||||| || || || |||||||| ||||||||||||||
Sbjct 926647 CCTCAAGCGTGATCGTCTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 926599
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | || || || ||||| ||||||||| ||||| ||||||
Sbjct 926369 CCACCGCGGAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 926310
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || || |||||||| ||||| || ||||||||||| ||||||| |||
Sbjct 926309 AGAGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 926250
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| || ||| ||| | | | ||||| |||||| ||
Sbjct 926249 ATACCCTCCTTGTCCTGGATCTTGCTCTT-GACGTTGTCGATGGTGTCCGACGACTCGAC 926191
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | ||| || || ||||||||||| ||||| ||||| ||||||||
Sbjct 926190 CTCGAGCGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 926143
Score = 132 bits (146), Expect = 4e-26
Identities = 170/230 (74%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | ||||| ||||| || ||||||||||||||| |||||
Sbjct 926597 CCACCGCGCAGACGGAGAACCAGGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCACTC 926538
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || ||||||||||| |||||||| ||||||||||| ||||||| ||
Sbjct 926537 AGAGTACGGCCATCCTCGAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGGG 926478
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812
| | |||||||||| ||| | || | ||| || | || | ||| || ||||||
Sbjct 926477 ATACCCTCCTTGTCC-TGAATCTTCGACTTGACATTGTCG--ATAGTATCCGAAGACTCC 926421
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| | || || || || || ||||| ||||| || || ||||||||
Sbjct 926420 ACCTCGAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACAAAGATCTGCAT 926371
Score = 118 bits (130), Expect = 1e-21
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || || || || |||||||||||||| ||||| |||||||||
Sbjct 926141 CCTCCACGGAGGCGGAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 926082
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| || ||||||||||| ||||| || || ||||| ||||| | |||
Sbjct 926081 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGA 926022
Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778
| || |||||||||| ||| ||
Sbjct 926021 ATGCCCTCCTTGTCCTGGATCTT 925999
>seq56
Length=2470257
Score = 150 bits (166), Expect = 2e-31
Identities = 167/221 (76%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| ||||| || ||||||||| ||||| ||||||||
Sbjct 880796 CCACCACGGAGGCGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 880737
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| || |||||||| |||||||| ||||||||||| ||||||| ||||
Sbjct 880736 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 880677
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| || |||||||||| ||| || ||| || | || | ||||| ||||| |
Sbjct 880676 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCCGAGGACTCGA 880619
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAA 41854
|||| | || || || || |||||||| ||||| ||||||
Sbjct 880618 CCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 880578
>seq64
Length=1576225
Score = 149 bits (164), Expect = 6e-31
Identities = 175/234 (75%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692
||||| || || || || | |||||| || || ||| ||||||||| ||||| ||||||
Sbjct 136472 CCGCCACCACGCAGGCGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 136531
Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752
|| ||||| | || || ||||||||||| ||||| ||||||||||| ||||||| |
Sbjct 136532 CTCAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGG 136591
Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811
|| | | |||||||||| ||| || ||| ||| | | | |||||| |||||
Sbjct 136592 GGGATACCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTC 136650
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||||| | || || || || ||||| || ||||| ||||| |||||||| ||
Sbjct 136651 CACCTCGAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 136704
>seq5
Length=1060171
Score = 84.2 bits (92), Expect = 2e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 85800 CGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTC 85859
|| ||||| || || || || |||||| |||| || ||| ||| ||||||||| ||
Sbjct 1011692 CGCATCGCGCCCCGCTCTGGTCTCGCCTCCAAGAACTTTATTGACACGGGCGCCGGCGTT 1011751
Query 85860 ATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACG 85908
|| ||||||||||||||||| | |||| || | |||||||||||||
Sbjct 1011752 ATTGACGCCGACTACCGCGGCCAGGTCAAGATTCTGCTCTTCAACCACG 1011800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462302150784000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |