Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1 156 5e-33
>seq1
Length=7437554
Score = 156 bits (172), Expect = 5e-33
Identities = 274/397 (69%), Gaps = 4/397 (1%)
Strand=Plus/Minus
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929
||||||||||| | | |||||| |||||||| ||||| ||| ||||| |||
Sbjct 5294692 ACGTAGAACTGTGCGAACATGTGGCACGGCGGCAGCGCCATCTTCTTCAGATCCGCGGGG 5294633
Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989
||||| || | |||| || || ||| | || || || | || || | ||
Sbjct 5294632 TTCCACGCCGACAGGATGATCCGCCTATCGTACGGACTCGTCCGCAGCTTCCGCACCACC 5294573
Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049
|| |||||||| |||||||| ||| || || ||||| | || |||||| ||||
Sbjct 5294572 TCGGCCAGCTGGTCGACGCCCTGACCCGTATAGTCCGTCTTCGCATCGACGTACTCGGCG 5294513
Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCC 146109
|| ||||||| ||||||||||||||| ||||| |||||||| || ||||||||||
Sbjct 5294512 CCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCACCTCCCTGTGCGAG 5294453
Query 146110 AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CC 146167
|| || | | | | ||||| || || || |||||| |||||||||| ||||| |
Sbjct 5294452 AGGCCCACGCTGTCCAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATGCGCACGCCCGCG 5294393
Query 146168 TCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGA 146227
|||| ||| | | || |||| || |||||||||||| ||||| ||||||
Sbjct 5294392 TCGCTGAGGG--CGAGCGACGACGTGTTGGCCTCGATGAACCAGAGGAGCTCGGCGAGGA 5294335
Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264
| | | |||||| | ||| || || || |||||
Sbjct 5294334 CGGCGCGGGTGAAGACGCGCTTCGTCGTGAGGAGGGG 5294298
Score = 118 bits (130), Expect = 1e-21
Identities = 145/197 (74%), Gaps = 1/197 (1%)
Strand=Plus/Minus
Query 145656 CCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCG 145714
|| ||||||| | || ||||| || || | ||| ||||||| | ||||||||| |
Sbjct 5294994 CCCGGGGCTCGCGCTCCAGCTGCGTCTCGAGCGCCTCGACGTGGTCGCAGTAGACGTGGG 5294935
Query 145715 CGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGT 145774
|||| |||| |||||| | | | || ||| |||| | || ||| |||| |||||
Sbjct 5294934 CGTCGCCCATGACGTGCGTCAGGCTGCCCGGCACGAGCTCGCAGACGTGCGCGATCATGT 5294875
Query 145775 AGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGC 145834
|| || || | |||||| || ||||||||||| || || || |||||||| | ||||
Sbjct 5294874 GCGTGAGGAGCGCGTAGCTCGCGATGTTGAAGGGGACGCCGAGGCCCATGTCGCAGGAGC 5294815
Query 145835 GCTGGTACAGCTGGCAG 145851
||||||| |||||||||
Sbjct 5294814 GCTGGTAGAGCTGGCAG 5294798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076268930880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |