Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1 197 1e-45 seq3 152 5e-32 seq4 140 3e-28 >seq1 Length=7437554 Score = 197 bits (218), Expect = 1e-45 Identities = 322/456 (71%), Gaps = 6/456 (1%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| | ||||||||| | || ||| | |||||| | |||| | Sbjct 4690932 AGAAGGCCGACTGGGCCATCCGCTGGATCCAGGACAAGGAGTCTACCTTCGCCCAGCGTC 4690873 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || |||||||| || || ||||| ||||||| || || ||| | || || | Sbjct 4690872 TCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCTATCTTCT 4690813 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| || |||||||||||||||||||| ||| ||||||||| ||||| | | Sbjct 4690812 GGCTGAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTGATCTCTCGTG 4690753 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCG-ACCG 117220 |||||||||| || |||||||||||| ||||| | || || ||| || ||| Sbjct 4690752 ACGAGGGTCTTCACACCGACTTTGCCTGCCTGCTGCACTCCCACATGAAGCACCGCGCCG 4690693 Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 | | | | | ||||||| |||||||||| ||| ||||||||| ||||| Sbjct 4690692 A-CAAGAAGGTGATTGAGGAGATCATCACCGACGCTGTCAGGATCGAGCAGGAGTTCCTT 4690634 Query 117281 ACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACA 117338 ||||| || || || |||| ||||| || | || || || | ||| ||| |||| Sbjct 4690633 ACCGAGGCTCTTCC-CTGCGCCCTGCTCGGCATGAA-CGCCAACCTCATGAAGCAGTACA 4690576 Query 117339 TCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGC 117398 | ||||||||||||||| | || || ||| || | | || ||| |||||| | Sbjct 4690575 TTGAGTTCGTCGCCGACCGTCTCCTCGTCGCCCTTGGCAACGAGAAGATCTACAAGTCCT 4690516 Query 117399 CCAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||||||| | ||||| ||| | ||||||| ||| Sbjct 4690515 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTGG 4690480 Score = 183 bits (202), Expect = 3e-41 Identities = 214/286 (75%), Gaps = 5/286 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || || ||||||| ||||||| | || || Sbjct 4691335 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTTTGGACCGCCGAGGAGATTGATCTC 4691276 Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | ||| | |||||| | ||| | |||||| Sbjct 4691275 TCCAAGGATCTCCA-CGACTGGAACAATCGCATCAACGACGATGAGAAGTACTTCATCTC 4691217 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| | || ||||| ||||||||| |||||||||||||||||||| || || ||||| Sbjct 4691216 TCACATCCTCGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTCGTTGAGCG 4691157 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||||| ||| | | ||||| || |||||||||||||| |||||| || Sbjct 4691156 CTTCAGCGGCGAGGTCCAGATTCCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 4691097 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||| | ||||| || | || ||| ||||||||||| ||| Sbjct 4691096 GGAGAACATCCACTCCGAGACCTACTCGCTGCTCATCGACACCTAC 4691051 Score = 123 bits (136), Expect = 3e-23 Identities = 136/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| | || ||||| || | |||| | | Sbjct 2327117 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATC 2327058 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| |||||||||||| | |||||||| || || Sbjct 2327057 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTG 2326998 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 || | ||| ||||| ||||| || || | ||||||||| |||||||||||||||||| Sbjct 2326997 ATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCTGACTACAACATCCAGAAG 2326938 Query 40879 G 40879 | Sbjct 2326937 G 2326937 >seq3 Length=5313354 Score = 152 bits (168), Expect = 5e-32 Identities = 174/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || |||||||| || || |||||| |||| || || | Sbjct 4708146 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 4708087 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | |||| ||||| || || | ||||| |||||||||||| | || Sbjct 4708086 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 4708028 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || || |||| ||| ||||| ||||| || || | ||||||||| |||||| Sbjct 4708027 CCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTA 4707968 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||||| ||| || || || ||| | ||| || | || || Sbjct 4707967 CAACATCCAGAAGGAGAGCACCCTCCACCTCGTGCTCCGCCTGCGTGGTGG 4707917 >seq4 Length=5284358 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || ||||| | || ||||| | | Sbjct 3189833 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTCGAGTCATCT 3189774 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || |||| ||||| ||||||||||| | |||||| Sbjct 3189773 GACACGATCGACAATGTGAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 3189714 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| || || || ||||| || |||| ||||||||| |||||||||| Sbjct 3189713 CAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAAC 3189654 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || ||||||||| | ||||||||||| ||| |||| Sbjct 3189653 ATTCAGAAGGAGTCGACGCTGCATCTCGTGCTGCG 3189619 Score = 129 bits (142), Expect = 6e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || |||||| | || || || | | | Sbjct 3189605 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTAGAGGTGGAGTCGAGC 3189546 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| | ||| || |||| ||||| ||||| || || | ||||| Sbjct 3189545 GACACGATTGACAACG-TGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCA 3189487 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || |||||||| || | |||||||||| |||||| || Sbjct 3189486 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTCAGCGACTATAA 3189427 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || ||||| || Sbjct 3189426 CATCCAGAAGGAGTCTACCCTCCATCTTGT 3189397 Score = 129 bits (142), Expect = 6e-25 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || |||||||| ||||||||| | || ||||| | |||| | | Sbjct 3190051 TCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACTATCG 3189992 Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819 | | | ||| || |||| ||||| |||||||||||| |||| ||||| || || | Sbjct 3189991 ACAATGTTAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGCCTGA 3189932 Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879 ||| ||| ||||| ||||| || |||| || |||||| ||| |||||||| ||||||| Sbjct 3189931 TCTTCGCTGGCAAGCAGCTTGAGGACGGCCGAACCCTCTCCGATTACAACATTCAGAAGG 3189872 Query 40880 AGGCCACGCTGCATCTAGT 40898 || ||||||| || || || Sbjct 3189871 AGTCCACGCTTCACCTGGT 3189853 Score = 120 bits (132), Expect = 3e-22 Identities = 141/188 (75%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| |||| ||||| || | || | | | |||| ||||| Sbjct 3190323 TCACTGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGATACTATCGACAACG-TCAAG 3190265 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | ||||| ||||||||||| | |||||||| || ||||| | ||| ||| Sbjct 3190264 TCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTCATTTTCGCTGGC 3190205 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || |||| ||||| || ||| |||||||||||||||||| |||| || Sbjct 3190204 AAGCAGCTTGAGGACGGCCGCACTCTTTCCGATTACAACATCCAGAAGGAGTCCACCCTC 3190145 Query 40891 CATCTAGT 40898 || || || Sbjct 3190144 CACCTTGT 3190137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218736302720