Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1 197 1e-45
seq3 152 5e-32
seq4 140 3e-28
>seq1
Length=7437554
Score = 197 bits (218), Expect = 1e-45
Identities = 322/456 (71%), Gaps = 6/456 (1%)
Strand=Plus/Minus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||||| ||||| | ||||||||| | || ||| | |||||| | |||| |
Sbjct 4690932 AGAAGGCCGACTGGGCCATCCGCTGGATCCAGGACAAGGAGTCTACCTTCGCCCAGCGTC 4690873
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
| || |||||||| || || ||||| ||||||| || || ||| | || || |
Sbjct 4690872 TCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCTATCTTCT 4690813
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||| ||||| || |||||||||||||||||||| ||| ||||||||| ||||| | |
Sbjct 4690812 GGCTGAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTGATCTCTCGTG 4690753
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCG-ACCG 117220
|||||||||| || |||||||||||| ||||| | || || ||| || |||
Sbjct 4690752 ACGAGGGTCTTCACACCGACTTTGCCTGCCTGCTGCACTCCCACATGAAGCACCGCGCCG 4690693
Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280
| | | | | ||||||| |||||||||| ||| ||||||||| |||||
Sbjct 4690692 A-CAAGAAGGTGATTGAGGAGATCATCACCGACGCTGTCAGGATCGAGCAGGAGTTCCTT 4690634
Query 117281 ACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACA 117338
||||| || || || |||| ||||| || | || || || | ||| ||| ||||
Sbjct 4690633 ACCGAGGCTCTTCC-CTGCGCCCTGCTCGGCATGAA-CGCCAACCTCATGAAGCAGTACA 4690576
Query 117339 TCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGC 117398
| ||||||||||||||| | || || ||| || | | || ||| |||||| |
Sbjct 4690575 TTGAGTTCGTCGCCGACCGTCTCCTCGTCGCCCTTGGCAACGAGAAGATCTACAAGTCCT 4690516
Query 117399 CCAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434
||||||| | ||||| ||| | ||||||| |||
Sbjct 4690515 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTGG 4690480
Score = 183 bits (202), Expect = 3e-41
Identities = 214/286 (75%), Gaps = 5/286 (2%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || || ||||||| ||||||| | || ||
Sbjct 4691335 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTTTGGACCGCCGAGGAGATTGATCTC 4691276
Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751
|||||||| | | | ||||||| | ||| | |||||| | ||| | ||||||
Sbjct 4691275 TCCAAGGATCTCCA-CGACTGGAACAATCGCATCAACGACGATGAGAAGTACTTCATCTC 4691217
Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811
||| | || ||||| ||||||||| |||||||||||||||||||| || || |||||
Sbjct 4691216 TCACATCCTCGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTCGTTGAGCG 4691157
Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| ||||| ||| | | ||||| || |||||||||||||| |||||| ||
Sbjct 4691156 CTTCAGCGGCGAGGTCCAGATTCCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 4691097
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
||||||| | ||||| || | || ||| ||||||||||| |||
Sbjct 4691096 GGAGAACATCCACTCCGAGACCTACTCGCTGCTCATCGACACCTAC 4691051
Score = 123 bits (136), Expect = 3e-23
Identities = 136/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || |||||||| ||||||||| | || ||||| || | |||| | |
Sbjct 2327117 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATC 2327058
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | ||||| |||||||||||| | |||||||| || ||
Sbjct 2327057 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTG 2326998
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|| | ||| ||||| ||||| || || | ||||||||| ||||||||||||||||||
Sbjct 2326997 ATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCTGACTACAACATCCAGAAG 2326938
Query 40879 G 40879
|
Sbjct 2326937 G 2326937
>seq3
Length=5313354
Score = 152 bits (168), Expect = 5e-32
Identities = 174/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || |||||||| || || |||||| |||| || || |
Sbjct 4708146 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 4708087
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|||||| | | | |||| ||||| || || | ||||| |||||||||||| | ||
Sbjct 4708086 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 4708028
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| || || |||| ||| ||||| ||||| || || | ||||||||| ||||||
Sbjct 4708027 CCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTA 4707968
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||||||| ||| || || || ||| | ||| || | || ||
Sbjct 4707967 CAACATCCAGAAGGAGAGCACCCTCCACCTCGTGCTCCGCCTGCGTGGTGG 4707917
>seq4
Length=5284358
Score = 140 bits (154), Expect = 3e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || |||||||| || || ||||| | || ||||| | |
Sbjct 3189833 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTCGAGTCATCT 3189774
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||| || |||| ||||| ||||||||||| | ||||||
Sbjct 3189773 GACACGATCGACAATGTGAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 3189714
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| || || || ||||| || |||| ||||||||| ||||||||||
Sbjct 3189713 CAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAAC 3189654
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|| ||||||||| | ||||||||||| ||| ||||
Sbjct 3189653 ATTCAGAAGGAGTCGACGCTGCATCTCGTGCTGCG 3189619
Score = 129 bits (142), Expect = 6e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || ||||| || |||||| | || || || | | |
Sbjct 3189605 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTAGAGGTGGAGTCGAGC 3189546
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | || |||| | ||| || |||| ||||| ||||| || || | |||||
Sbjct 3189545 GACACGATTGACAACG-TGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCA 3189487
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| ||| || || |||||||| || | |||||||||| |||||| ||
Sbjct 3189486 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTCAGCGACTATAA 3189427
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| | || || ||||| ||
Sbjct 3189426 CATCCAGAAGGAGTCTACCCTCCATCTTGT 3189397
Score = 129 bits (142), Expect = 6e-25
Identities = 148/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
|||| || || || |||||||| ||||||||| | || ||||| | |||| | |
Sbjct 3190051 TCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACTATCG 3189992
Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819
| | | ||| || |||| ||||| |||||||||||| |||| ||||| || || |
Sbjct 3189991 ACAATGTTAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGCCTGA 3189932
Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879
||| ||| ||||| ||||| || |||| || |||||| ||| |||||||| |||||||
Sbjct 3189931 TCTTCGCTGGCAAGCAGCTTGAGGACGGCCGAACCCTCTCCGATTACAACATTCAGAAGG 3189872
Query 40880 AGGCCACGCTGCATCTAGT 40898
|| ||||||| || || ||
Sbjct 3189871 AGTCCACGCTTCACCTGGT 3189853
Score = 120 bits (132), Expect = 3e-22
Identities = 141/188 (75%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770
|||| ||||| ||||||||| |||| ||||| || | || | | | |||| |||||
Sbjct 3190323 TCACTGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGATACTATCGACAACG-TCAAG 3190265
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
|| || | ||||| ||||||||||| | |||||||| || ||||| | ||| |||
Sbjct 3190264 TCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTCATTTTCGCTGGC 3190205
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| ||||| || |||| ||||| || ||| |||||||||||||||||| |||| ||
Sbjct 3190204 AAGCAGCTTGAGGACGGCCGCACTCTTTCCGATTACAACATCCAGAAGGAGTCCACCCTC 3190145
Query 40891 CATCTAGT 40898
|| || ||
Sbjct 3190144 CACCTTGT 3190137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218736302720
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