Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq4 123 2e-23
seq3 109 5e-19
seq1 100 2e-16
>seq4
Length=5284358
Score = 123 bits (136), Expect = 2e-23
Identities = 153/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| |||||||| || || ||||| || ||||| | ||||| |||||| |
Sbjct 3189398 CAAGATGGAGGGTAGACTCCTTCTGGATGTTATAGTCGCTGAGGGTGCGACCATCCTCCA 3189457
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
|||| || |||||| |||| ||||||||||| || ||||| || ||||||||||| ||
Sbjct 3189458 GCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAA 3189517
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || || || | || | ||||| | ||| ||||| | ||| | || ||||
Sbjct 3189518 TCTTGCTCTTCACGTTGTCAATCGTGTCGCTCGACTCCACCTCTAGGGTGATAGTCTTGC 3189577
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||| || || || || ||||||||
Sbjct 3189578 CGGTCAGGGTCTTGACGAAGATCTGCAT 3189605
Score = 116 bits (128), Expect = 3e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || ||||||||||| ||| | ||||| ||||||||||| || |||
Sbjct 3189637 GTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTACCA 3189696
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||||||||||||||| ||||| || |||||||||||||| ||| || ||
Sbjct 3189697 GCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTGCTCTTC 3189756
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | ||||||||| | || | ||| || || || || ||
Sbjct 3189757 ACATTGTCGATCGTGTCAGATGACTCGACCTCCAGCGTGATCGTCTTACCCGTGAGGGTC 3189816
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || ||||||||
Sbjct 3189817 TTGACGAAGATCTGCAT 3189833
Score = 113 bits (124), Expect = 4e-20
Identities = 133/180 (74%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||||||| | |||||| ||||| |||||
Sbjct 3190142 GTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCGTCCTCAAGCTG 3190201
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| |||||| | ||||| |||||||| |||||||| |||||||||||||| || ||
Sbjct 3190202 CTTGCCAGCGAAAATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTT 3190261
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| || |||| | ||||||||||| ||| | || ||||| ||
Sbjct 3190262 CGACTTGACGTTGTCGATAGTATCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 3190321
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| || ||||||||||||||| | || || |||||
Sbjct 3189853 ACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGAGAGGGTTCGGCCGTCCTCA 3189912
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || |||||| |||| || ||||||||||| || || |||||||||||||| |
Sbjct 3189913 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGA 3189972
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||||| | |||| || || | ||||||||| | ||| | || |||
Sbjct 3189973 ATCTTCGACTTAACATTGTCGATAGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTG 3190032
Query 118710 CCGGTCAGAGTTTTTAC 118726
|| ||||| || || ||
Sbjct 3190033 CCCGTCAGGGTCTTGAC 3190049
>seq3
Length=5313354
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||||| || ||| || || |||||||| ||| | ||||| ||||||
Sbjct 4707934 CACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTC 4707993
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || ||| |||| || |||||||| ||||| || ||||||||||||||
Sbjct 4707994 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTG 4708053
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||| | ||| ||||||| ||| | || ||
Sbjct 4708054 GATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTT 4708113
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || |||||||||||
Sbjct 4708114 CCCCGTGAGGGTCTTGACGAAAATCTGCAT 4708143
>seq1
Length=7437554
Score = 100 bits (110), Expect = 2e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| || | ||||| |||||||||||| || || ||| | ||
Sbjct 2326939 TTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATC 2326998
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|| |||||||| ||||| || |||||||||||||| || || || || | |||
Sbjct 2326999 AGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 2327058
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| |||||||| | ||||||||| | ||| | || ||||| ||||| || || || |||
Sbjct 2327059 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 2327118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830019313824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |