Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq4 122 6e-23 seq3 118 7e-22 seq1 102 5e-17 >seq4 Length=5284358 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||| || || | || || ||||| |||||||||||||| Sbjct 3189607 CCACCACGCAGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAG 3189666 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | |||||| || || || ||||| |||||||||||| || Sbjct 3189667 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGG 3189726 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | |||| || | || ||||| Sbjct 3189727 ATGCCCTCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGACC 3189786 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||| || || || ||||| || || || ||||||||||| Sbjct 3189787 TCCAGCGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| |||||||| ||||| Sbjct 3190119 CCACCGCGGAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAA 3190178 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||||||||| ||||||||||| |||||||||||| || Sbjct 3190179 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCGGGAGGG 3190238 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | ||| | || ||||| Sbjct 3190239 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCCGAGGACTCGACC 3190298 Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367 || | |||||||| ||||| |||| Sbjct 3190299 TCGAGGGTGATGGTCTTGCCAGTGA 3190323 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || || || | ||| || ||||| ||||| |||||| Sbjct 3189379 CCGCCACGAAGACGAAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTATAGTCGCTG 3189438 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || |||| |||||| || ||||| || || ||||||||||| || Sbjct 3189439 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 3189498 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | |||| ||| |||| || || Sbjct 3189499 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCAATCGTGTCGCTCGACTCCACC 3189558 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || |||||||| || || || || ||||||||||| Sbjct 3189559 TCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3189605 >seq3 Length=5313354 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||| ||||| | || || || ||||| |||||||||||||| Sbjct 4707917 CCACCACGCAGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 4707976 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| ||||| || || |||||||||||| ||| Sbjct 4707977 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 4708036 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | |||| || || || Sbjct 4708037 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 4708096 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || ||||| || || || || ||||||||| Sbjct 4708097 TCGAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATC 4708144 >seq1 Length=7437554 Score = 102 bits (112), Expect = 5e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| ||||||||||| || || ||| | || || | ||||||||| |||||||| Sbjct 2326939 TTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATC 2326998 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || |||||||||||| ||| | || ||||||||| ||||| ||| | || | | Sbjct 2326999 AGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 2327058 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380 || | || | || ||||| || | |||||||| ||||| || || || ||||| || Sbjct 2327059 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 2327117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071716504320