Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq2 141 2e-28
seq1 87.8 4e-12
>seq2
Length=5694997
Score = 141 bits (156), Expect = 2e-28
Identities = 273/400 (68%), Gaps = 26/400 (7%)
Strand=Plus/Minus
Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070
|||||||| |||||||||| || ||||| ||||| || |||||||||||||| ||| |
Sbjct 3586094 TGCTTTTCTACGGTCCTCCGGGGACAGGAAAGACATCGACCATCCTGGCGCTCGCC---A 3586038
Query 254071 CCCTGTTGGGCGAGG-GGAACATGAGAGAG---CGCGTGCTCGAGCTGAACGCTTCTGAC 254126
| |||| || ||||| ||| || || || |||||||||||||| || |||
Sbjct 3586037 AGCAGTTGTACGGTCCGGAAC-TGATCAAGTCACGAGTCCTCGAGCTGAACGCCTCCGAC 3585979
Query 254127 GAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGT------CG 254180
|| || || | | ||||||| ||||| | |||| ||| || ||| ||
Sbjct 3585978 GAGCGTGGCATCTCCATCGTCCGAGACAAAGTGAAGAACTTCGCCCGCATGCAACTGACG 3585919
Query 254181 ATTTCGTCGT--TCC----------AACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTG 254228
| || | ||| || | ||| |||||||||||| || | |||||
Sbjct 3585918 AACCCGACCGCATCCTATAAGCAGAAATTCCCCTGCCCGCCTTTCAAGATCATCATCCTC 3585859
Query 254229 GACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACG 254288
|||||||| ||| ||||||| ||||| ||| ||| || || ||||| ||||||||
Sbjct 3585858 GACGAGGCCGACTCCATGACCCAAGACGCCCAGAGCGCGCTGCGACGAACCATGGAGACC 3585799
Query 254289 CACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCG 254348
|| | | || ||||| |||||| | |||||||||||| | ||||||| ||
Sbjct 3585798 TACAGCAAGATCACACGTTTCTGCCTGATCTGCAACTACGTGACTCGCATCATCGATCCC 3585739
Query 254349 CTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGCACCCTCG 254388
||||| ||| ||| |||||| || |||| | |||||
Sbjct 3585738 CTGGCAAGTCGATGCAGCAAGTTCCGCTTCAAGAGCCTCG 3585699
Score = 105 bits (116), Expect = 1e-17
Identities = 114/151 (75%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 254017 TCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGT 254076
|| |||| || ||||| || ||||||||||| || ||||||||||| ||||| | | |
Sbjct 1924393 TCTACGGCCCCCCCGGGACGGGCAAGACGTCCACGATCCTGGCGCTCGCCCGCCGCATCT 1924334
Query 254077 TGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGT 254136
|||| ||||||| | || || || ||||| ||||| || ||||| |||||
Sbjct 1924333 ACGGCGTCTCGAACATGCGGCAGATGGTCCTGGAGCTCAACGCCTCCGACGACCGCGGCA 1924274
Query 254137 TGGACGTCGTCCGCGACAAGATCAAGACTTT 254167
| |||||||||||||| |||||||||| ||
Sbjct 1924273 TCGACGTCGTCCGCGAGCAGATCAAGACGTT 1924243
>seq1
Length=7437554
Score = 87.8 bits (96), Expect = 4e-12
Identities = 220/332 (66%), Gaps = 18/332 (5%)
Strand=Plus/Minus
Query 254037 GGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGA 254096
||||||||| | | | | ||| ||||| || || ||||||| | ||| |
Sbjct 5309450 GGCAAGACGACGAGCGTGCTGTGCCTGGCGCGGCAGATGCTGGGCGACTCGTACAAG--- 5309394
Query 254097 GAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAG 254156
||| |||||| ||||| ||||| ||||| ||||| | |||||||| || ||
Sbjct 5309393 GAGGCCGTGCTGGAGCTCAACGCCAGCGACGAGCGCGGCATCGACGTCGTGCGGAACCGC 5309334
Query 254157 ATCAAGACTTTCTCCAAGATGTCGATTTCGTCGTTCCAACCCGGCTGTCCGCCTTTCAAG 254216
|||||| ||| | ||| | | | || | |||| | | | || ||||
Sbjct 5309333 ATCAAGGGCTTCGCGCAGAAGAAGGTCACGCTG------CCCGCCGGGCGGCA---CAAG 5309283
Query 254217 CTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGA 254276
||||| ||||||||||||||||||| ||||||| | | ||||||| || || || ||
Sbjct 5309282 CTCGTCATCCTGGACGAGGCGGACAGCATGACGTCGGGCGCGCAGCAGGCGCTGCGGCGG 5309223
Query 254277 ACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTC---G 254333
|||||||||| |||| |||||| ||| | | ||||||| | |||
Sbjct 5309222 ACGATGGAGATCTACTCGAACACGACGCGGTTTGCGTTCGCGTGCAACCA---GTCCAAC 5309166
Query 254334 AAGATCATCGCCCCGCTGGCTTCTCGGTGCGC 254365
|||||||||| |||||| || |||||||
Sbjct 5309165 AAGATCATCGAGCCGCTGCAGTCGAGGTGCGC 5309134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073765409450496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |