Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq3 120 2e-22
seq4 116 3e-21
seq1 95.1 1e-14
>seq3
Length=5313354
Score = 120 bits (132), Expect = 2e-22
Identities = 153/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || |||||||||||||| |||||||||||| || ||| | || || || ||
Sbjct 4707940 GTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTG 4707999
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| |||||||| |||| ||||| |||||||| || | |||||||||||| || ||
Sbjct 4708000 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 4708059
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | |||| | ||||||||| | ||| || ||||| |||||
Sbjct 4708060 GGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCCGT 4708119
Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343
|| ||||| || || || ||||| ||||||
Sbjct 4708120 GAGGGTCTTGACGAAAATCTGCATCTTGCCT 4708150
>seq4
Length=5284358
Score = 116 bits (128), Expect = 3e-21
Identities = 143/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| ||||| |||||| | || |||| | || ||||| || || || |||||
Sbjct 3189414 CTCCTTCTGGATGTTATAGTCGCTGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAA 3189473
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | ||||| ||||| ||||| | ||||||||||||| ||| || ||| | ||
Sbjct 3189474 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCA-CGT 3189532
Query 45265 CGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323
| || | |||| | ||||||||| | ||| || |||||||| ||||| ||||| |
Sbjct 3189533 TGTCAATCGTGTCGCTCGACTCCACCTCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGA 3189592
Query 45324 CAAAGATTTGCAT 45336
| ||||| |||||
Sbjct 3189593 CGAAGATCTGCAT 3189605
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
|||||||| |||||||||||||||||||||| || |||| |||| || || ||
Sbjct 3189631 TGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGC 3189690
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253
|| || || || || | ||||| |||||||| || | |||||||||||| ||| ||
Sbjct 3189691 TTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTG 3189750
Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313
||| || | | |||| ||| ||||||| || |||||||| |||||
Sbjct 3189751 CTCTTCACATTGTCGATCGTGTCAGATGACTCGACCTCCAGCGTGATCGTCTTACCCGTG 3189810
Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| || ||||| |||||
Sbjct 3189811 AGGGTCTTGACGAAGATCTGCAT 3189833
>seq1
Length=7437554
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 45141 TGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGG 45200
|||| ||||||| ||||||||||| || ||| | || || || || || ||||
Sbjct 2326931 TGCTAACCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGG 2326990
Query 45201 CGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAA 45260
|||| |||| ||||| |||||||| || | |||||||||||| || || ||| |
Sbjct 2326991 CGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA 2327050
Query 45261 CCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCT 45320
| | | | ||||| ||| ||||| | ||| || |||||||||||||| ||||
Sbjct 2327051 CATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCT 2327110
Query 45321 TCACAAA 45327
|||| ||
Sbjct 2327111 TCACGAA 2327117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395074853321512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |