Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4 396 2e-105
seq1 141 8e-29
seq3 96.9 3e-15
>seq4
Length=5284358
Score = 396 bits (438), Expect = 2e-105
Identities = 1233/1891 (65%), Gaps = 44/1891 (2%)
Strand=Plus/Plus
Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164
|| ||| || || ||||| |||| | || || | | ||| || || || ||||||||
Sbjct 2048820 CTGGTCGACAGTGAACTGAATGGGGGCCGCAGCGGCCTGGGTACGGAGGTAGTACATGCC 2048879
Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224
||||| ||||| | |||||| | ||| || || || | || || | ||
Sbjct 2048880 GGTCTTGAGACCAAGCTTCCAGCCAGCAAAGTGCATGCTGGTGATCTTGCCCATAGAGGG 2048939
Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284
| ||||| | |||| ||||| |||||| || || || || |||||||| ||
Sbjct 2048940 ATCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCACGATCGGCAGC 2048999
Query 22285 CATATTTATCAATGTA-CGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343
||| | | ||| | ||| || || ||||| |||||||||||||| | ||| |
Sbjct 2049000 CATCTGGA-CAACCTGGCGCTGAGAAATCTCCCACACGGTCTTGTACAGAGCCTTGACAT 2049058
Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403
| || || ||| |||||| ||| ||||| | | |||||| || || |
Sbjct 2049059 CATCAGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGATCCTGTTCTTCA 2049118
Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463
| ||| ||| | ||| | || | || |||| ||| | |||| || || |
Sbjct 2049119 TGCCATCAGACCAGAGACCAAGCTCGACGAGGTCCTTGAGCAGCCAAGGGTTGACGACCT 2049178
Query 22464 GAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523
| |||||||| | || ||| || || ||||| |||||||| ||| | || ||||| | |
Sbjct 2049179 GGAACTCGCCAGCCAGGACACGACGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACT 2049238
Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583
| ||||| || || ||||| | || || || ||||| || || | || || ||||
Sbjct 2049239 CGTTGTTGCCAAGAATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAACGAGCAGAGAGT 2049298
Query 22584 TTCTCAAGCCGTGCT--TTGAAATTTTACTC-TTGAGCATCGACCAGTCCCACAGATCGG 22640
| | | ||||||| |||| | | ||| ||||| | ||| |||||||| || |
Sbjct 2049299 TGCGGATACCGTGCTCCTTGA---TCTGCTCCTTGAGGCTGTCCCACTCCCACAGGTCAG 2049355
Query 22641 ACGGCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCGGGCTGCC 22698
| ||| | |||| ||||||| ||| | |||| | || | || || ||| |||
Sbjct 2049356 AGGGCTTGACAT---CCCACATGTCGAACTGCAGAATACCCTCGGAG--GCAGGGGAGCC 2049410
Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCC---AACGC 22755
| | | || ||| || || | | |||||| || || ||| ||| | ||
Sbjct 2049411 CTTGAAGGTAGAGTAGGGGCCCTGCTCCTTGGCAAGCTC-CA--TCGACTCGGTGAGGGC 2049467
Query 22756 GCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTT---TC 22812
| ||| || |||||||||||||| | ||||||||| | ||||| || || | ||
Sbjct 2049468 GGCGTGGTAGATAGTCTCGAAGATCTGCTTGTTCAACT-GGCGG--GCTTCGGGTGACTC 2049524
Query 22813 GTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGG 22872
| | |||| || | || ||| || || || | |||||| || || | |||||| ||
Sbjct 2049525 GAAAGGCAGGCGAAGAGCCAGGAAAGCATCGGCAAGACCCTGGACACCCAGACCGATGGG 2049584
Query 22873 TCGGTTTTTCAGATTCGACACTTTT----GCCTCGGGCAAAGGATACCAATTCGAATCGA 22928
||||| || || || || ||||| ||| || || || ||||
Sbjct 2049585 TCGGTGGCGCATGTTG----CTGTTACGAGCCTCCTGCACGGGGTAGTGGTTGACGTCGA 2049640
Query 22929 TTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGT 22988
| | |||| | ||| | || | | || | | |||||||
Sbjct 2049641 TGATCTTGTTTAGGTTGCGAACAACGACCTGGGTGACGTCGTGAAGCTTCTGGAAGTCGT 2049700
Query 22989 AAACGCCCGA-TTGTA--CAACAAA--CTTGTTGACGGCGATCGAGGCAAGATTGCATAC 23043
| |||| ||||| ||||| | | | || || | |||||||| ||||| ||
Sbjct 2049701 AGCAGCCCTCGTTGTAGTCAACATAGGCAGGCAGA--GCCAGAGAGGCAAGGTTGCAGAC 2049758
Query 23044 GGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTAT 23103
||| ||||| || || | |||||| | || || || || || ||| | ||
Sbjct 2049759 GGCGACCTCATCAGGGGCGGAGTACTCAATGATCTCTGTGCAGAGGTTGGAGCTGCGGAT 2049818
Query 23104 CGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGG 23163
|| || | || |||||||||| || || ||||| | |||||||||||||||| | ||
Sbjct 2049819 GGTCCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGG 2049878
Query 23164 CGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACG 23223
|||| ||||| ||| | ||||| ||| | ||| | |||| ||| | | ||
Sbjct 2049879 GTTGCCAGTCTCAGTCTGGGCCTCGAGGATGGAGTACCAGAGCTTCTGGGCGCGGAT-CG 2049937
Query 23224 TCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGT 23282
|| || | | || || ||||||||| | ||||| || || || || ||||||
Sbjct 2049938 TCTTGCGACCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCACCGT 2049997
Query 23283 AACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTT 23342
| |||||||| ||||| || | | | || |||||||| ||||| || || |
Sbjct 2049998 AGCAGTCGGCAAGGCCAGGGCACTCGTTAGGGCACATGAGGGTCCACTCGCCGTTCTTCT 2050057
Query 23343 CAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCA 23402
| || || |||| || ||||| || ||||| || ||| ||| || || || |||||||
Sbjct 2050058 CCACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGGAAGAGGTCACGAGCGCGCA 2050117
Query 23403 CCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACG 23462
||||||| || ||| |||||| | || | || || || || |||| ||||| |
Sbjct 2050118 CCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCCGAGTGCCAAG 2050177
Query 23463 GCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGG 23522
|||| ||||| | |||||| || || || | ||| ||||| ||||| || ||||| | ||
Sbjct 2050178 GCTCTAGGTAGATGGCAAAGGCACCAGGACGCTTGTTGCCACCCTGGTCCACGTATCTGG 2050237
Query 23523 CCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCG 23582
| ||||||||| |||||| ||||| || | || ||||||||| | ||| ||| |
Sbjct 2050238 CAGTGTTGTTGAACACTCGGAGCATGGGGATGATACCGTTGGAGGTACCGTTGGTGCCGG 2050297
Query 23583 CCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATT 23642
| | || || | || || | | ||| |||| | ||| || || || || |
Sbjct 2050298 CAATGTAGGAGCCCGTGGCACGGATGCGGTGGACGTTCAGACCAATACCGCCAGCCATCT 2050357
Query 23643 TCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGG 23702
| || ||||| ||||| || || ||||||||||||||||| |||||||| || ||
Sbjct 2050358 TGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATGCCCTCAATGCTGTCATCCTTCA 2050417
Query 23703 TCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCG 23762
| | || | ||| ||||| |||| || || | |||||| | || ||| ||||| |
Sbjct 2050418 TGTCCACAAGGAAGCACGACGACAGCTGAGCCTGCGGCGTACCAGCGTTGAAGAGTGTGG 2050477
Query 23763 GGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAA 23822
| |||||| || ||| | | ||||| || ||||| || |||||| | ||||
Sbjct 2050478 GAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTTGTAGGTCTCGATGACACGCTCAA 2050537
Query 23823 TGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCG 23882
||| || || ||||||| ||| || ||||| ||||||| || || | ||||||
Sbjct 2050538 TGTTGTCGCCCCAGATACCGACGGCAACACGCATGATCATGTGCTGCGGACGCTCGACGA 2050597
Query 23883 TGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCAT 23942
| ||||| | |||| ||| |||||||| | | ||| || ||||| || || | |
Sbjct 2050598 TCTTACCGTTGAGCTTGAGCAGGTATGAACGCTCGAGCGTCTTGAATCCGAAGTACTGGT 2050657
Query 23943 AGTTAAAGTCACGATCGTGCACTATGGCCGA 23973
|||| |||||||| || | || ||||| ||
Sbjct 2050658 AGTTGAAGTCACGGTCATAGACAATGGCTGA 2050688
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| ||||| || |||||| | || || || || |
Sbjct 3189605 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTAGAGGTGGAGTCGAGC 3189546
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | || ||||||||| || | || || ||||||
Sbjct 3189545 GACACGATTGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 3189486
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || |||||||| || ||| |||| || | || | ||||| ||||||
Sbjct 3189485 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTCAGCGACTATAAC 3189426
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| || || || || || || ||||| || ||| | || | |||||
Sbjct 3189425 ATCCAGAAGGAGTCTACCCTCCATCTTGTCCTTCGTCTTCGTGGCGG 3189379
Score = 104 bits (114), Expect = 2e-17
Identities = 144/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||| ||||| ||||| ||||| || |||||| | || || || ||||||| | | |||
Sbjct 3190051 TCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACTATCG 3189992
Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322
| | || || || || ||||||||| ||| | || || || |||||||| || |
Sbjct 3189991 ACAATGTTAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGCCTGA 3189932
Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382
| ||||||||||| ||| | || ||| || | |||||| |||||||| || |
Sbjct 3189931 TCTTCGCTGGCAAGCAGCTTGAGGACGGCCGAACCCTCTCCGATTACAACATTCAGAAGG 3189872
Query 31383 AATCGACTCTTCATCTGGTACT 31404
| || || ||||| ||||| ||
Sbjct 3189871 AGTCCACGCTTCACCTGGTCCT 3189850
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || || || |||||||| | || || || | ||
Sbjct 3189833 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTCGAGTCATCT 3189774
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||||||||| ||| | ||||||||||||
Sbjct 3189773 GACACGATCGACAATGTGAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 3189714
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || ||||| || ||| | || ||| | || | ||| || |||
Sbjct 3189713 CAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAAC 3189654
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || ||||| || ||||| || || | ||| | || ||||
Sbjct 3189653 ATTCAGAAGGAGTCGACGCTGCATCTCGTGCTGCGTCTGCGTGGTGGTA 3189605
Score = 87.8 bits (96), Expect = 2e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276
|| ||||| || |||||| |||| || || | || || | | |||| | ||||| |
Sbjct 3190321 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGATACTATCGACAACGTCAAGTCG 3190262
Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336
| || ||||||||| ||| | || |||||||||||||| || || |||||||||||
Sbjct 3190261 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTCATTTTCGCTGGCAAG 3190202
Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396
||| | || ||| ||| | |||||| ||||| || || || || || || ||
Sbjct 3190201 CAGCTTGAGGACGGCCGCACTCTTTCCGATTACAACATCCAGAAGGAGTCCACCCTCCAC 3190142
Query 31397 CTGGTACT 31404
|| || ||
Sbjct 3190141 CTTGTCCT 3190134
>seq1
Length=7437554
Score = 141 bits (156), Expect = 8e-29
Identities = 234/333 (70%), Gaps = 6/333 (2%)
Strand=Plus/Minus
Query 57960 ACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGC 58019
|| |||||| || | || | || ||||| || || || ||||| ||||| || |
Sbjct 4690888 ACCTTCGCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCC 4690829
Query 58020 TTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAAC 58079
||||| | || || ||| ||||||| || ||||| |||||||||||||| || ||||
Sbjct 4690828 TTTGCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCAAC 4690769
Query 58080 GAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139
||| |||| || || ||||||||||| || || || ||||| ||||| || |||| |||
Sbjct 4690768 GAGCTGATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCCTGCTGCACTCCCAC 4690709
Query 58140 ATTGTCAATAAAC-CGACG-CGGGATCG-CATCTTGGACATTATCACCGAGGCGGTCGCG 58196
| | || | | || || | || | || ||| || |||||||| || ||| |
Sbjct 4690708 A---TGAAGCACCGCGCCGACAAGAAGGTGATTGAGGAGATCATCACCGACGCTGTCAGG 4690652
Query 58197 ATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGAT 58256
||||| | ||||| | ||||| || || || ||| ||||||| |||||| |
Sbjct 4690651 ATCGAGCAGGAGTTCCTTACCGAGGCTCTTCCCTGCGCCCTGCTCGGCATGAACGCCAAC 4690592
Query 58257 TTGATGTCAAAGTACATTGAGTTTGTTGCCGAC 58289
| ||| ||||||||||||| || ||||||
Sbjct 4690591 CTCATGAAGCAGTACATTGAGTTCGTCGCCGAC 4690559
Score = 89.7 bits (98), Expect = 5e-13
Identities = 108/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
|||||| ||||| ||||| ||||| || |||||| | || || || | || |||| |
Sbjct 2327118 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCAT 2327059
Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
||| | ||||| || || ||||||||| ||| | || |||||||||||||| ||
Sbjct 2327058 CGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCT 2326999
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGA 31347
|| ||||| ||||| ||| | || ||
Sbjct 2326998 GATTTTCGCCGGCAAGCAGCTCGAGGA 2326972
>seq3
Length=5313354
Score = 96.9 bits (106), Expect = 3e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| ||||| || || || || || |||||| |||| || || |
Sbjct 4708146 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 4708087
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| |||| | ||||| | || ||||||||| ||| | || ||||||
Sbjct 4708086 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 4708027
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||||| || || ||||| ||||| ||| | || ||
Sbjct 4708026 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGA 4707989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765998810240
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