Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4 396 2e-105 seq1 141 8e-29 seq3 96.9 3e-15 >seq4 Length=5284358 Score = 396 bits (438), Expect = 2e-105 Identities = 1233/1891 (65%), Gaps = 44/1891 (2%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || || ||||| |||| | || || | | ||| || || || |||||||| Sbjct 2048820 CTGGTCGACAGTGAACTGAATGGGGGCCGCAGCGGCCTGGGTACGGAGGTAGTACATGCC 2048879 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||| ||||| | |||||| | ||| || || || | || || | || Sbjct 2048880 GGTCTTGAGACCAAGCTTCCAGCCAGCAAAGTGCATGCTGGTGATCTTGCCCATAGAGGG 2048939 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | ||||| | |||| ||||| |||||| || || || || |||||||| || Sbjct 2048940 ATCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCACGATCGGCAGC 2048999 Query 22285 CATATTTATCAATGTA-CGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 ||| | | ||| | ||| || || ||||| |||||||||||||| | ||| | Sbjct 2049000 CATCTGGA-CAACCTGGCGCTGAGAAATCTCCCACACGGTCTTGTACAGAGCCTTGACAT 2049058 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403 | || || ||| |||||| ||| ||||| | | |||||| || || | Sbjct 2049059 CATCAGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGATCCTGTTCTTCA 2049118 Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463 | ||| ||| | ||| | || | || |||| ||| | |||| || || | Sbjct 2049119 TGCCATCAGACCAGAGACCAAGCTCGACGAGGTCCTTGAGCAGCCAAGGGTTGACGACCT 2049178 Query 22464 GAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523 | |||||||| | || ||| || || ||||| |||||||| ||| | || ||||| | | Sbjct 2049179 GGAACTCGCCAGCCAGGACACGACGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACT 2049238 Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583 | ||||| || || ||||| | || || || ||||| || || | || || |||| Sbjct 2049239 CGTTGTTGCCAAGAATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAACGAGCAGAGAGT 2049298 Query 22584 TTCTCAAGCCGTGCT--TTGAAATTTTACTC-TTGAGCATCGACCAGTCCCACAGATCGG 22640 | | | ||||||| |||| | | ||| ||||| | ||| |||||||| || | Sbjct 2049299 TGCGGATACCGTGCTCCTTGA---TCTGCTCCTTGAGGCTGTCCCACTCCCACAGGTCAG 2049355 Query 22641 ACGGCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCGGGCTGCC 22698 | ||| | |||| ||||||| ||| | |||| | || | || || ||| ||| Sbjct 2049356 AGGGCTTGACAT---CCCACATGTCGAACTGCAGAATACCCTCGGAG--GCAGGGGAGCC 2049410 Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCC---AACGC 22755 | | | || ||| || || | | |||||| || || ||| ||| | || Sbjct 2049411 CTTGAAGGTAGAGTAGGGGCCCTGCTCCTTGGCAAGCTC-CA--TCGACTCGGTGAGGGC 2049467 Query 22756 GCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTT---TC 22812 | ||| || |||||||||||||| | ||||||||| | ||||| || || | || Sbjct 2049468 GGCGTGGTAGATAGTCTCGAAGATCTGCTTGTTCAACT-GGCGG--GCTTCGGGTGACTC 2049524 Query 22813 GTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGG 22872 | | |||| || | || ||| || || || | |||||| || || | |||||| || Sbjct 2049525 GAAAGGCAGGCGAAGAGCCAGGAAAGCATCGGCAAGACCCTGGACACCCAGACCGATGGG 2049584 Query 22873 TCGGTTTTTCAGATTCGACACTTTT----GCCTCGGGCAAAGGATACCAATTCGAATCGA 22928 ||||| || || || || ||||| ||| || || || |||| Sbjct 2049585 TCGGTGGCGCATGTTG----CTGTTACGAGCCTCCTGCACGGGGTAGTGGTTGACGTCGA 2049640 Query 22929 TTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGT 22988 | | |||| | ||| | || | | || | | ||||||| Sbjct 2049641 TGATCTTGTTTAGGTTGCGAACAACGACCTGGGTGACGTCGTGAAGCTTCTGGAAGTCGT 2049700 Query 22989 AAACGCCCGA-TTGTA--CAACAAA--CTTGTTGACGGCGATCGAGGCAAGATTGCATAC 23043 | |||| ||||| ||||| | | | || || | |||||||| ||||| || Sbjct 2049701 AGCAGCCCTCGTTGTAGTCAACATAGGCAGGCAGA--GCCAGAGAGGCAAGGTTGCAGAC 2049758 Query 23044 GGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTAT 23103 ||| ||||| || || | |||||| | || || || || || ||| | || Sbjct 2049759 GGCGACCTCATCAGGGGCGGAGTACTCAATGATCTCTGTGCAGAGGTTGGAGCTGCGGAT 2049818 Query 23104 CGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGG 23163 || || | || |||||||||| || || ||||| | |||||||||||||||| | || Sbjct 2049819 GGTCCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGG 2049878 Query 23164 CGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACG 23223 |||| ||||| ||| | ||||| ||| | ||| | |||| ||| | | || Sbjct 2049879 GTTGCCAGTCTCAGTCTGGGCCTCGAGGATGGAGTACCAGAGCTTCTGGGCGCGGAT-CG 2049937 Query 23224 TCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGT 23282 || || | | || || ||||||||| | ||||| || || || || |||||| Sbjct 2049938 TCTTGCGACCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCACCGT 2049997 Query 23283 AACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTT 23342 | |||||||| ||||| || | | | || |||||||| ||||| || || | Sbjct 2049998 AGCAGTCGGCAAGGCCAGGGCACTCGTTAGGGCACATGAGGGTCCACTCGCCGTTCTTCT 2050057 Query 23343 CAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCA 23402 | || || |||| || ||||| || ||||| || ||| ||| || || || ||||||| Sbjct 2050058 CCACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGGAAGAGGTCACGAGCGCGCA 2050117 Query 23403 CCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACG 23462 ||||||| || ||| |||||| | || | || || || || |||| ||||| | Sbjct 2050118 CCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCCGAGTGCCAAG 2050177 Query 23463 GCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGG 23522 |||| ||||| | |||||| || || || | ||| ||||| ||||| || ||||| | || Sbjct 2050178 GCTCTAGGTAGATGGCAAAGGCACCAGGACGCTTGTTGCCACCCTGGTCCACGTATCTGG 2050237 Query 23523 CCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCG 23582 | ||||||||| |||||| ||||| || | || ||||||||| | ||| ||| | Sbjct 2050238 CAGTGTTGTTGAACACTCGGAGCATGGGGATGATACCGTTGGAGGTACCGTTGGTGCCGG 2050297 Query 23583 CCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATT 23642 | | || || | || || | | ||| |||| | ||| || || || || | Sbjct 2050298 CAATGTAGGAGCCCGTGGCACGGATGCGGTGGACGTTCAGACCAATACCGCCAGCCATCT 2050357 Query 23643 TCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGG 23702 | || ||||| ||||| || || ||||||||||||||||| |||||||| || || Sbjct 2050358 TGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATGCCCTCAATGCTGTCATCCTTCA 2050417 Query 23703 TCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCG 23762 | | || | ||| ||||| |||| || || | |||||| | || ||| ||||| | Sbjct 2050418 TGTCCACAAGGAAGCACGACGACAGCTGAGCCTGCGGCGTACCAGCGTTGAAGAGTGTGG 2050477 Query 23763 GGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAA 23822 | |||||| || ||| | | ||||| || ||||| || |||||| | |||| Sbjct 2050478 GAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTTGTAGGTCTCGATGACACGCTCAA 2050537 Query 23823 TGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCG 23882 ||| || || ||||||| ||| || ||||| ||||||| || || | |||||| Sbjct 2050538 TGTTGTCGCCCCAGATACCGACGGCAACACGCATGATCATGTGCTGCGGACGCTCGACGA 2050597 Query 23883 TGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCAT 23942 | ||||| | |||| ||| |||||||| | | ||| || ||||| || || | | Sbjct 2050598 TCTTACCGTTGAGCTTGAGCAGGTATGAACGCTCGAGCGTCTTGAATCCGAAGTACTGGT 2050657 Query 23943 AGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 |||| |||||||| || | || ||||| || Sbjct 2050658 AGTTGAAGTCACGGTCATAGACAATGGCTGA 2050688 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| ||||| ||||| || |||||| | || || || || | Sbjct 3189605 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTAGAGGTGGAGTCGAGC 3189546 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || ||||||||| || | || || |||||| Sbjct 3189545 GACACGATTGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 3189486 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||| |||| || | || | ||||| |||||| Sbjct 3189485 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTCAGCGACTATAAC 3189426 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || || || ||||| || ||| | || | ||||| Sbjct 3189425 ATCCAGAAGGAGTCTACCCTCCATCTTGTCCTTCGTCTTCGTGGCGG 3189379 Score = 104 bits (114), Expect = 2e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| ||||| ||||| || |||||| | || || || ||||||| | | ||| Sbjct 3190051 TCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACTATCG 3189992 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | || || || || ||||||||| ||| | || || || |||||||| || | Sbjct 3189991 ACAATGTTAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGCCTGA 3189932 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | ||||||||||| ||| | || ||| || | |||||| |||||||| || | Sbjct 3189931 TCTTCGCTGGCAAGCAGCTTGAGGACGGCCGAACCCTCTCCGATTACAACATTCAGAAGG 3189872 Query 31383 AATCGACTCTTCATCTGGTACT 31404 | || || ||||| ||||| || Sbjct 3189871 AGTCCACGCTTCACCTGGTCCT 3189850 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || |||||||| | || || || | || Sbjct 3189833 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTCGAGTCATCT 3189774 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| ||| | |||||||||||| Sbjct 3189773 GACACGATCGACAATGTGAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 3189714 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| || ||| | || ||| | || | ||| || ||| Sbjct 3189713 CAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAAC 3189654 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || ||||| || ||||| || || | ||| | || |||| Sbjct 3189653 ATTCAGAAGGAGTCGACGCTGCATCTCGTGCTGCGTCTGCGTGGTGGTA 3189605 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276 || ||||| || |||||| |||| || || | || || | | |||| | ||||| | Sbjct 3190321 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGATACTATCGACAACGTCAAGTCG 3190262 Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336 | || ||||||||| ||| | || |||||||||||||| || || ||||||||||| Sbjct 3190261 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTCATTTTCGCTGGCAAG 3190202 Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396 ||| | || ||| ||| | |||||| ||||| || || || || || || || Sbjct 3190201 CAGCTTGAGGACGGCCGCACTCTTTCCGATTACAACATCCAGAAGGAGTCCACCCTCCAC 3190142 Query 31397 CTGGTACT 31404 || || || Sbjct 3190141 CTTGTCCT 3190134 >seq1 Length=7437554 Score = 141 bits (156), Expect = 8e-29 Identities = 234/333 (70%), Gaps = 6/333 (2%) Strand=Plus/Minus Query 57960 ACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGC 58019 || |||||| || | || | || ||||| || || || ||||| ||||| || | Sbjct 4690888 ACCTTCGCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCC 4690829 Query 58020 TTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAAC 58079 ||||| | || || ||| ||||||| || ||||| |||||||||||||| || |||| Sbjct 4690828 TTTGCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCAAC 4690769 Query 58080 GAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139 ||| |||| || || ||||||||||| || || || ||||| ||||| || |||| ||| Sbjct 4690768 GAGCTGATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCCTGCTGCACTCCCAC 4690709 Query 58140 ATTGTCAATAAAC-CGACG-CGGGATCG-CATCTTGGACATTATCACCGAGGCGGTCGCG 58196 | | || | | || || | || | || ||| || |||||||| || ||| | Sbjct 4690708 A---TGAAGCACCGCGCCGACAAGAAGGTGATTGAGGAGATCATCACCGACGCTGTCAGG 4690652 Query 58197 ATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGAT 58256 ||||| | ||||| | ||||| || || || ||| ||||||| |||||| | Sbjct 4690651 ATCGAGCAGGAGTTCCTTACCGAGGCTCTTCCCTGCGCCCTGCTCGGCATGAACGCCAAC 4690592 Query 58257 TTGATGTCAAAGTACATTGAGTTTGTTGCCGAC 58289 | ||| ||||||||||||| || |||||| Sbjct 4690591 CTCATGAAGCAGTACATTGAGTTCGTCGCCGAC 4690559 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| ||||| || |||||| | || || || | || |||| | Sbjct 2327118 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCAT 2327059 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| || || ||||||||| ||| | || |||||||||||||| || Sbjct 2327058 CGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCT 2326999 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGA 31347 || ||||| ||||| ||| | || || Sbjct 2326998 GATTTTCGCCGGCAAGCAGCTCGAGGA 2326972 >seq3 Length=5313354 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| || || || || || |||||| |||| || || | Sbjct 4708146 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 4708087 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | ||||| | || ||||||||| ||| | || |||||| Sbjct 4708086 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 4708027 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || || ||||| ||||| ||| | || || Sbjct 4708026 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGA 4707989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765998810240