Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4 111 3e-19 >seq4 Length=5284358 Score = 111 bits (122), Expect = 3e-19 Identities = 413/641 (64%), Gaps = 10/641 (2%) Strand=Plus/Plus Query 94407 CTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCA 94466 ||| || |||||||||| |||| ||||| || || | | ||||| |||||||||||| Sbjct 2049960 CTCGTACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCAAGGCCAGGGCA 2050019 Query 94467 CTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---ACTCTCTCCATGAAGAG 94523 ||||| |||||||| |||| ||| || || |||| || | || ||||||||| Sbjct 2050020 CTCGTTAGGGCACATGAGGGTCCA---CTCGCCGTTCTTCTCCACACGCTTCATGAAGAG 2050076 Query 94524 ATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATCTTCATTACCGGCATT 94583 ||| | | ||||| || |||| || || | | | || || || || ||| || Sbjct 2050077 ATCGGGGATCCAGAGGGCGAGGAAGAGGTCACGAGCGCGCACCTCCTCCTTTCCGTGGTT 2050136 Query 94584 CTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCAATCAGAAATATAGATGGCTGC 94643 ||| | | ||| | || || || ||| |||||| | |||||||| Sbjct 2050137 CTTGCGGAGGTCGAGGAACTCGAAGACATCCGAGTGCCAAGGCTCTAGGTAGATGGCAAA 2050196 Query 94644 AGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACAGAGACGTTAAAGATTTG 94703 || || | ||||| || |||||| || | | | ||| | ||| || | | | Sbjct 2050197 GGCACCAGGACGCTTGTTGCCACCCTGGTCCACGTATCTGGCAGTGTTGTTGAACACTCG 2050256 Query 94704 GAGGAACGCCATGAGACCAGGGTGGGTACCACTCCATGACGA-AATGGGGCTTCCTTTTG 94762 ||| | | |||| ||| | |||||| | || || |||| | || | | Sbjct 2050257 GAGCATGGGGATGATACCGTTGGAGGTACCGTTGG-TGCCGGCAATGTAGGAGCCCGTGG 2050315 Query 94763 CCCTCAAATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCT 94822 | | | || | || | || | || ||||| |||||||||| || || Sbjct 2050316 CACGGATGCGGTGGACGTTCAGACCAATACCGCCAGCCATCTTGGAGATCATGGCGCAGG 2050375 Query 94823 CCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACG 94882 ||| || || || || || ||||||||||| ||||| | | | ||| ||||||||||| Sbjct 2050376 TCTTGAGGGTGTCGTAGATGCCCTCAATGCTGTCATCCTTCATGTCCACAAGGAAGCACG 2050435 Query 94883 AGGAAAGTTG-GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAA 94941 | || || || | || | | || ||| || || |||||||| || || ||||| || Sbjct 2050436 ACGACAGCTGAGCCTGCGGC-GTACCAGCGTTGAAGAGTGTGGGAGAGGCGTGGGTGAAG 2050494 Query 94942 TAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATG 95001 | | || |||||||| | || || || |||||| | |||| || || Sbjct 2050495 AACTTGCTGGACATGAGGTTGTAGGTCTCGATGACACGCTCAATGTTGTCGCCCCAGATA 2050554 Query 95002 CCGACAGCCACACGCATAATCATGTCCTGAGGGCGCTCAAC 95042 ||||| || |||||||| ||||||| ||| || ||||| || Sbjct 2050555 CCGACGGCAACACGCATGATCATGTGCTGCGGACGCTCGAC 2050595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583087108760