Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4 143 4e-29 seq1 91.5 2e-13 >seq4 Length=5284358 Score = 143 bits (158), Expect = 4e-29 Identities = 277/409 (68%), Gaps = 0/409 (0%) Strand=Plus/Plus Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033 ||||| || || || || ||||| | | |||||| || | | | || || ||||| Sbjct 2050012 CCAGGGCACTCGTTAGGGCACATGAGGGTCCACTCGCCGTTCTTCTCCACACGCTTCATG 2050071 Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093 |||||||| || ||||| || || | || || || | | | |||||| ||||| Sbjct 2050072 AAGAGATCGGGGATCCAGAGGGCGAGGAAGAGGTCACGAGCGCGCACCTCCTCCTTTCCG 2050131 Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153 ||||| || ||||||||| | | | ||| || ||||| || || | ||| ||| Sbjct 2050132 TGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCCGAGTGCCAAGGCTCTAGGTAGATG 2050191 Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213 || | | || || || ||||| || ||||| || | |||||| || ||||| || | Sbjct 2050192 GCAAAGGCACCAGGACGCTTGTTGCCACCCTGGTCCACGTATCTGGCAGTGTTGTTGAAC 2050251 Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273 |||| | ||| || || ||||| ||||| | ||| ||||| |||| || ||| || Sbjct 2050252 ACTCGGAGCATGGGGATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCC 2050311 Query 72274 CTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 72333 ||||||| || | | ||||| || || || ||||| || ||||| | ||| Sbjct 2050312 GTGGCACGGATGCGGTGGACGTTCAGACCAATACCGCCAGCCATCTTGGAGATCATGGCG 2050371 Query 72334 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 72382 || || | || || ||||||||||| || || |||||| |||||| Sbjct 2050372 CAGGTCTTGAGGGTGTCGTAGATGCCCTCAATGCTGTCATCCTTCATGT 2050420 >seq1 Length=7437554 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || || || ||| ||| |||||||| || | | || | |||||||| || || || Sbjct 4690725 CAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGG 4690784 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 |||||||| ||||||||||| || ||||| || ||||| ||||| | || |||||| Sbjct 4690785 CCGGGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAAG 4690844 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAA 42209 || || || || || || ||||||| Sbjct 4690845 ATACCCTCAACAGCAGCGAAGGCAA 4690869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138595974720