Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq4 143 4e-29
seq1 91.5 2e-13
>seq4
Length=5284358
Score = 143 bits (158), Expect = 4e-29
Identities = 277/409 (68%), Gaps = 0/409 (0%)
Strand=Plus/Plus
Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033
||||| || || || || ||||| | | |||||| || | | | || || |||||
Sbjct 2050012 CCAGGGCACTCGTTAGGGCACATGAGGGTCCACTCGCCGTTCTTCTCCACACGCTTCATG 2050071
Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093
|||||||| || ||||| || || | || || || | | | |||||| |||||
Sbjct 2050072 AAGAGATCGGGGATCCAGAGGGCGAGGAAGAGGTCACGAGCGCGCACCTCCTCCTTTCCG 2050131
Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153
||||| || ||||||||| | | | ||| || ||||| || || | ||| |||
Sbjct 2050132 TGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCCGAGTGCCAAGGCTCTAGGTAGATG 2050191
Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213
|| | | || || || ||||| || ||||| || | |||||| || ||||| || |
Sbjct 2050192 GCAAAGGCACCAGGACGCTTGTTGCCACCCTGGTCCACGTATCTGGCAGTGTTGTTGAAC 2050251
Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273
|||| | ||| || || ||||| ||||| | ||| ||||| |||| || ||| ||
Sbjct 2050252 ACTCGGAGCATGGGGATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCC 2050311
Query 72274 CTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 72333
||||||| || | | ||||| || || || ||||| || ||||| | |||
Sbjct 2050312 GTGGCACGGATGCGGTGGACGTTCAGACCAATACCGCCAGCCATCTTGGAGATCATGGCG 2050371
Query 72334 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 72382
|| || | || || ||||||||||| || || |||||| ||||||
Sbjct 2050372 CAGGTCTTGAGGGTGTCGTAGATGCCCTCAATGCTGTCATCCTTCATGT 2050420
>seq1
Length=7437554
Score = 91.5 bits (100), Expect = 2e-13
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| || || ||| ||| |||||||| || | | || | |||||||| || || ||
Sbjct 4690725 CAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGG 4690784
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|||||||| ||||||||||| || ||||| || ||||| ||||| | || ||||||
Sbjct 4690785 CCGGGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAAG 4690844
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAA 42209
|| || || || || || |||||||
Sbjct 4690845 ATACCCTCAACAGCAGCGAAGGCAA 4690869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138595974720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |