Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq4 143 4e-29
seq1 141 1e-28
>seq4
Length=5284358
Score = 143 bits (158), Expect = 4e-29
Identities = 339/504 (67%), Gaps = 6/504 (1%)
Strand=Plus/Minus
Query 96834 CCAATGCTCAGAATGTACAATG-CAATGTCACGATACGTTACACAGGGCGGCAATAAACG 96892
|| |||||| || ||| ||| || || || ||||||| ||||| ||||| || ||
Sbjct 2050265 CCCATGCTCCGAGTGTTCAACAACACTGCCA-GATACGTGGACCAGGGTGGCAACAAGCG 2050207
Query 96893 GCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGA 96952
|| || || | ||| ||||| | || ||||||||| |||| || || || || ||||
Sbjct 2050206 TCCTGGTGCCTTTGCCATCTACCTAGAGCCTTGGCACTCGGATGTCTTCGAGTTCCTCGA 2050147
Query 96953 GATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTG 97012
| ||||| ||| || || |||| || || | ||| | || || |||||
Sbjct 2050146 CCTCCGCAAGAACCACGGAAAGGAGGAGGTGCGCGCTCGTGACCTCTTCCTCGCCCTCTG 2050087
Query 97013 GGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCC 97072
| | || ||| | ||||||||||| || | | ||| | |||| ||| ||||||||
Sbjct 2050086 GATCCCCGATCTCTTCATGAAGCGTGTGGAGAAGAACGGCGAGTGGACCCTCATGTGCCC 2050027
Query 97073 CGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGC 97132
|| || || || || |||| |||| || || ||||| ||||| |||| |
Sbjct 2050026 TAACGAGTGCCCTGGCCTTGCCGACTGCTACGGTGAGGAGTTCGAGGCTCTGTACGAGAA 2049967
Query 97133 CTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACGAGAA-CTGTGGAAGGCC 97190
||||||| ||||| || || |||||| || || | |||| || ||| | ||
Sbjct 2049966 GTACGAGCGCGAGGGTCGCGGTCGCAAGACGA-TCCGCGC-CCAGAAGCTCTGGTACTCC 2049909
Query 97191 ATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAAT 97250
||| | ||| ||| |||||||| | || | ||| |||||||||||| || ||
Sbjct 2049908 ATCCTCGAGGCCCAGACTGAGACTGGCAACCCCTTCATGCTCTACAAGGATGCCTGCAAC 2049849
Query 97251 CGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATT 97310
||||| |||||||| || | || |||||| ||||||| || ||||| || ||
Sbjct 2049848 CGCAAGAGCAACCAGAAGAACCTCGGGACCATCCGCAGCTCCAACCTCTGCACAGAGATC 2049789
Query 97311 GTAGAGTACGCCTCTCCGGACGAG 97334
| |||||| || | || || |||
Sbjct 2049788 ATTGAGTACTCCGCCCCTGATGAG 2049765
>seq1
Length=7437554
Score = 141 bits (156), Expect = 1e-28
Identities = 336/502 (67%), Gaps = 23/502 (5%)
Strand=Plus/Minus
Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420
|| || || ||||| | |||| || || |||||| | ||| | ||||| | | ||||
Sbjct 4690939 ATTCGCAAGAAGGCCGACTGGGCCATCCGCTGGATCCAGGACAAGGAGTCTACCTTCGCC 4690880
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
| | || || || ||||| || || ||||| |||||||| ||| ||||| |
Sbjct 4690879 CAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCT 4690820
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540
||||| ||||| |||||||| || ||||||||||| ||||| | |||||| | ||
Sbjct 4690819 ATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTGATC 4690760
Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTG---TTTCGCAACTATCTG 125597
||||| |||||||| || ||| ||||||||| || ||| | | || | |
Sbjct 4690759 TCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCCTGCTGCACTCCCACATGAAGCAC 4690700
Query 125598 CGTCCCGAGTGCAGATCCAGCGA-TGAAAAGGTCATCAACATTGTAACCGATGCCGTGAG 125656
|| |||| || | | || ||| || ||||| ||||| || || ||
Sbjct 4690699 CGCGCCGA---CA-AGAAGGTGATTGAGGAGATCATC---------ACCGACGCTGTCAG 4690653
Query 125657 GATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAA 125716
||| || || ||||| || ||||| | || || | | || | ||||||||| |||
Sbjct 4690652 GATCGAGCAGGAGTTCCTTACCGAGGCTCTTCCCTGCGCCCTGCTCGGCATGAACGCCAA 4690593
Query 125717 GCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC-- 125774
|| ||| ||||||| ||||| || || || ||||| || || |||||
Sbjct 4690592 CCTCATGAAGCAGTACATTGAGTTCGTCGCCGACCGTCTCCT---CGTCGCCCTTGGCAA 4690536
Query 125775 CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGG 125833
|| ||||| ||||| || || ||||| || |||||| | ||| || || | ||
Sbjct 4690535 CGAGAAGATCTACAAGTCCTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGG 4690476
Query 125834 TAAGACCAACTTTTTCGAGAAG 125855
||||||||||| |||||||||
Sbjct 4690475 CAAGACCAACTTCTTCGAGAAG 4690454
Score = 129 bits (142), Expect = 9e-25
Identities = 203/288 (70%), Gaps = 2/288 (1%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| ||||||| |||||||| | ||| ||| | |||||
Sbjct 4691335 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTTTGGACCGCCGAGGAGATTGATCTC 4691276
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || |||| ||| | | ||| | | || |||| | || || ||
Sbjct 4691275 TCCAAGGATCTCCACGACTGGAACAATCGCATCAACGACGATGAGAAGTACTTCATCTCT 4691216
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||||| | |||||||| |||| ||| || || ||||||||||| || || ||||| ||
Sbjct 4691215 CACATCCTCGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTCGTTGA-GCG 4691157
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257
||| ||| | ||||| |||| ||||| ||||| ||||| ||||||||
Sbjct 4691156 CTTCAGCGGCGAGGTCCAGATTCCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 4691097
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
|||||| | ||||| || | ||||| || || |||| |||||
Sbjct 4691096 GGAGAACATCCACTCCGAGACCTACTCGCTGCTCATCGACACCTACAT 4691049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058533046720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |