Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4 143 4e-29 seq1 141 1e-28 >seq4 Length=5284358 Score = 143 bits (158), Expect = 4e-29 Identities = 339/504 (67%), Gaps = 6/504 (1%) Strand=Plus/Minus Query 96834 CCAATGCTCAGAATGTACAATG-CAATGTCACGATACGTTACACAGGGCGGCAATAAACG 96892 || |||||| || ||| ||| || || || ||||||| ||||| ||||| || || Sbjct 2050265 CCCATGCTCCGAGTGTTCAACAACACTGCCA-GATACGTGGACCAGGGTGGCAACAAGCG 2050207 Query 96893 GCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGA 96952 || || || | ||| ||||| | || ||||||||| |||| || || || || |||| Sbjct 2050206 TCCTGGTGCCTTTGCCATCTACCTAGAGCCTTGGCACTCGGATGTCTTCGAGTTCCTCGA 2050147 Query 96953 GATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTG 97012 | ||||| ||| || || |||| || || | ||| | || || ||||| Sbjct 2050146 CCTCCGCAAGAACCACGGAAAGGAGGAGGTGCGCGCTCGTGACCTCTTCCTCGCCCTCTG 2050087 Query 97013 GGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCC 97072 | | || ||| | ||||||||||| || | | ||| | |||| ||| |||||||| Sbjct 2050086 GATCCCCGATCTCTTCATGAAGCGTGTGGAGAAGAACGGCGAGTGGACCCTCATGTGCCC 2050027 Query 97073 CGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGC 97132 || || || || || |||| |||| || || ||||| ||||| |||| | Sbjct 2050026 TAACGAGTGCCCTGGCCTTGCCGACTGCTACGGTGAGGAGTTCGAGGCTCTGTACGAGAA 2049967 Query 97133 CTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACGAGAA-CTGTGGAAGGCC 97190 ||||||| ||||| || || |||||| || || | |||| || ||| | || Sbjct 2049966 GTACGAGCGCGAGGGTCGCGGTCGCAAGACGA-TCCGCGC-CCAGAAGCTCTGGTACTCC 2049909 Query 97191 ATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAAT 97250 ||| | ||| ||| |||||||| | || | ||| |||||||||||| || || Sbjct 2049908 ATCCTCGAGGCCCAGACTGAGACTGGCAACCCCTTCATGCTCTACAAGGATGCCTGCAAC 2049849 Query 97251 CGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATT 97310 ||||| |||||||| || | || |||||| ||||||| || ||||| || || Sbjct 2049848 CGCAAGAGCAACCAGAAGAACCTCGGGACCATCCGCAGCTCCAACCTCTGCACAGAGATC 2049789 Query 97311 GTAGAGTACGCCTCTCCGGACGAG 97334 | |||||| || | || || ||| Sbjct 2049788 ATTGAGTACTCCGCCCCTGATGAG 2049765 >seq1 Length=7437554 Score = 141 bits (156), Expect = 1e-28 Identities = 336/502 (67%), Gaps = 23/502 (5%) Strand=Plus/Minus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || ||||| | |||| || || |||||| | ||| | ||||| | | |||| Sbjct 4690939 ATTCGCAAGAAGGCCGACTGGGCCATCCGCTGGATCCAGGACAAGGAGTCTACCTTCGCC 4690880 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | | || || || ||||| || || ||||| |||||||| ||| ||||| | Sbjct 4690879 CAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCT 4690820 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| ||||| |||||||| || ||||||||||| ||||| | |||||| | || Sbjct 4690819 ATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTGATC 4690760 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTG---TTTCGCAACTATCTG 125597 ||||| |||||||| || ||| ||||||||| || ||| | | || | | Sbjct 4690759 TCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCCTGCTGCACTCCCACATGAAGCAC 4690700 Query 125598 CGTCCCGAGTGCAGATCCAGCGA-TGAAAAGGTCATCAACATTGTAACCGATGCCGTGAG 125656 || |||| || | | || ||| || ||||| ||||| || || || Sbjct 4690699 CGCGCCGA---CA-AGAAGGTGATTGAGGAGATCATC---------ACCGACGCTGTCAG 4690653 Query 125657 GATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAA 125716 ||| || || ||||| || ||||| | || || | | || | ||||||||| ||| Sbjct 4690652 GATCGAGCAGGAGTTCCTTACCGAGGCTCTTCCCTGCGCCCTGCTCGGCATGAACGCCAA 4690593 Query 125717 GCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC-- 125774 || ||| ||||||| ||||| || || || ||||| || || ||||| Sbjct 4690592 CCTCATGAAGCAGTACATTGAGTTCGTCGCCGACCGTCTCCT---CGTCGCCCTTGGCAA 4690536 Query 125775 CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGG 125833 || ||||| ||||| || || ||||| || |||||| | ||| || || | || Sbjct 4690535 CGAGAAGATCTACAAGTCCTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGG 4690476 Query 125834 TAAGACCAACTTTTTCGAGAAG 125855 ||||||||||| ||||||||| Sbjct 4690475 CAAGACCAACTTCTTCGAGAAG 4690454 Score = 129 bits (142), Expect = 9e-25 Identities = 203/288 (70%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| ||||||| |||||||| | ||| ||| | ||||| Sbjct 4691335 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTTTGGACCGCCGAGGAGATTGATCTC 4691276 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | ||| | | || |||| | || || || Sbjct 4691275 TCCAAGGATCTCCACGACTGGAACAATCGCATCAACGACGATGAGAAGTACTTCATCTCT 4691216 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||||| | |||||||| |||| ||| || || ||||||||||| || || ||||| || Sbjct 4691215 CACATCCTCGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTCGTTGA-GCG 4691157 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||| ||| | ||||| |||| ||||| ||||| ||||| |||||||| Sbjct 4691156 CTTCAGCGGCGAGGTCCAGATTCCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 4691097 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 |||||| | ||||| || | ||||| || || |||| ||||| Sbjct 4691096 GGAGAACATCCACTCCGAGACCTACTCGCTGCTCATCGACACCTACAT 4691049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058533046720