Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq4 122 2e-22
>seq4
Length=5284358
Score = 122 bits (134), Expect = 2e-22
Identities = 157/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || ||||| | ||||| || ||||| || |||||||| || || | ||| ||
Sbjct 3189393 AAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTATAGTCGCTGAGGGTGCGACCATC 3189452
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || || ||||| || || || | ||| || |||||||| || || || || ||
Sbjct 3189453 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTC 3189512
Query 104467 CTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAG 104525
||||||| ||||| || || || || | || ||||| | || |||||||| || ||||
Sbjct 3189513 CTGAATC-TTGCTCTTCACGTTGTCAATCGTGTCGCTCGACTCCACCTCTAGGGTGATAG 3189571
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||| || || || || || || || ||||||||
Sbjct 3189572 TCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3189605
Score = 111 bits (122), Expect = 4e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || || |||||||| || ||||| || || || | ||||||
Sbjct 3189622 AGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCC 3189681
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || |||||||| || || | ||| || || || || || || || || |||
Sbjct 3189682 TCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 3189741
Query 104468 TGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|||||| ||||| || ||||| || | || || | || ||||| || || || ||
Sbjct 3189742 TGAATC-TTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGACCTCCAGCGTGATCGT 3189800
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||| || || || || || || ||||||||
Sbjct 3189801 CTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833
Score = 95.1 bits (104), Expect = 3e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || || || || || |||| ||||| || || || || |||
Sbjct 3189865 GTGGACTCCTTCTGAATGTTGTAATCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCA 3189924
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| ||||| || || || || || || ||||||||||| | ||
Sbjct 3189925 GCGAAGATCAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTA 3189984
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | |||||| | || ||||| || || || ||||| || || || ||
Sbjct 3189985 ACATTGTCGATAGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTC 3190044
Query 104543 TTTAC 104547
|| ||
Sbjct 3190045 TTGAC 3190049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397337834976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |