Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq4 105 1e-18 seq2 98.7 2e-16 >seq4 Length=5284358 Score = 105 bits (116), Expect = 1e-18 Identities = 86/102 (84%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| || | ||| | | || || |||||||| || ||||||||||| |||| Sbjct 1671203 CGCCAAGCGTCACCGAAAGATTT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 1671261 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 |||| ||||| |||||||||||||| ||||||||| |||||| Sbjct 1671262 TCCGGCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 1671303 Score = 89.7 bits (98), Expect = 8e-14 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| |||| ||| |||||| ||||||| || || |||| |||| Sbjct 1671362 TGATCTACGAGGAGACCCGTGGTGTCCTGAAGACCTTCCTCGAGGGTGTCATCCGCGATG 1671421 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || || ||||||||||| || || ||||| ||||| ||| | || ||||||| | Sbjct 1671422 CCGTCACATACACCGAGCACGCCAAGCGCAAGACGGTCACGTCCCTCGACGTCGTCTACG 1671481 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | |||| || || ||||| | | || ||||| || ||||| Sbjct 1671482 CTCTGAAGCGACAGGGCCGCACCCTCTACGGTTTCGGTGGTTAA 1671525 >seq2 Length=5694997 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||||| | || || |||||||| || ||||||||||| || || Sbjct 4081363 GCCAAGCGCCACCGAAAGATCT-TGCGTGACAACATCCAGGGCATCACCAAGCCCGCCAT 4081421 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| |||||| Sbjct 4081422 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 4081462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075134169896