Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq7 123 5e-23
seq1 104 5e-17
seq4 84.2 4e-11
>seq7
Length=3601230
Score = 123 bits (136), Expect = 5e-23
Identities = 468/714 (66%), Gaps = 59/714 (8%)
Strand=Plus/Minus
Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTG----C 279760
|| || |||||||||||||||||||||||||| || ||| | || || | |
Sbjct 1085803 CTCTCTGGTGGTTGGAAGATGAAGCTGGCCCTGTGCCGTGCCGT----CTTCGAGGCCCC 1085748
Query 279761 CGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCT 279820
|||| |||| ||||| || ||||| |||||||| | || | ||||| |||||
Sbjct 1085747 CGATATCCTGCTGCTCGACGAGCCCACCAACCATCTCGATGTGAAGAACGTCAAGTGGCT 1085688
Query 279821 AGTGTCCTACCTAACCAG-TCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTG 279879
| | ||||| | || ||| || ||||| |||| ||||| ||||||||||
Sbjct 1085687 CGAGGAGTACCTCATCAACTCTCCT---TGCA-CTTCCATCATCGTCTCCCACGACTCTG 1085632
Query 279880 GCTTCCTAGATGCCGTGTGCTCTGC-CATCATTCACTATGAGCAAAATCTGAAGCTCTCC 279938
| ||||| || ||||||| | || |||| | ||||| |||| | ||||||
Sbjct 1085631 GTTTCCTCGACAACGTGTGC-CAGCACATCGTCCACTACGAGCGCT---TCAAGCTC--- 1085579
Query 279939 AAGC---ACATCGGCAACCTGTCTGCTTTCGTGGCAAA---GCGCCCTGAGGCGGCCGCC 279992
|||| ||| ||||||||| | | ||||| ||| | ||||| | | | ||
Sbjct 1085578 AAGCGCTACAGGGGCAACCTGGCCGAGTTCGT--CAAGCGTGTGCCCTCTGCCAGGT-CC 1085522
Query 279993 TACTATGACCTGAAGGACGCCACCGCCA---AGTGGGAATTCCCTGAGCCAGGGTTTCTG 280049
||||| || || | ||| ||| | ||| ||||||||||| || || ||
Sbjct 1085521 TACTACGAGCTC---GGTGCCTCCGAGATTGAGTTCACCTTCCCTGAGCCCGGTTTCCTC 1085465
Query 280050 GAGGGCATCACATCAAAGG--------AT----CGCGCAATCATGAAGCTCCGTGGCGTC 280097
||||| ||| | |||| || || || | || || | || | ||
Sbjct 1085464 GAGGGTGTCAAGACCAAGGCCAAGGCCATTCTCCGAGCCACCAAGATGA-CCTTCCAGTA 1085406
Query 280098 TCCTTTGCTTATCCCAATGGCCCCAACATCTTCAGCAGTGTCAACTCGCAGGTTTCTATG 280157
|||| | | |||| |||||| |||| | || ||| || ||| ||| ||
Sbjct 1085405 TCCT--GGTACCTCCAA--GCCCCAG-ATCTCCGACA---TCAGCTTCCAGTGCTCTCTG 1085354
Query 280158 AACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTC 280217
||| || |||| ||||||||| ||||| ||||| || ||||| ||||| ||||| ||
Sbjct 1085353 GGCTCCCGTATTGCTGTCATTGGTCCCAACGGTGCTGGCAAGTCCACCCTGATCAACGTG 1085294
Query 280218 CTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATG 280277
|| ||||| ||| | |||| ||||| | | |||| ||||| || ||
Sbjct 1085293 CTCACTGGTGAGCTCATCCCCACCGAGGGTGAGATCTACCAGCACGAGAACATTCGTATC 1085234
Query 280278 GCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAAC 280337
|| ||| | |||||||||||| ||||||||| |||||| |||||| |||||| |
Sbjct 1085233 GCCTACATTAAGCAGCACGCTTTCGCCCACATCGATAACCACTTGGACAAGACTCCCTCC 1085174
Query 280338 CAATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390
| ||||| |||||||| | | || | ||| |||||| ||| | |||| ||
Sbjct 1085173 GAGTACATCCAGTGGCG-TTTCCAGACTGGTGAGGATCGTGAGACCATGGACCG 1085121
Score = 114 bits (126), Expect = 3e-20
Identities = 160/222 (72%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
||||||||||| || |||| ||||| ||||| || |||| ||||| ||||| |||
Sbjct 1086166 GGTGAGGATCTCTGCAACTGCACCTTCTCCCTCGCCTACGGTGCCAAGATCCTGCTCAAC 1086107
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | |||| ||||||||||| | || || ||||| ||||||||| || |
Sbjct 1086106 CAGACTCACCTCCGTCTCAAGCGTGGCCAGCGCTACGGTCTTTGCGGTCCCAACGGTTCC 1086047
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| |||||| ||||| ||||| |||| ||| | | ||| ||||| | |||
Sbjct 1086046 GGAAAGTCCACTCTCATGCGTGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 1085988
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|| ||||| | ||| |||| || |||||||| |||||||
Sbjct 1085987 GTCCGAGGTTAAGACCGTGTTCGTTGAGCACGATCTCGACTC 1085946
>seq1
Length=7437554
Score = 104 bits (114), Expect = 5e-17
Identities = 267/408 (65%), Gaps = 18/408 (4%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||| ||||| ||||||||||||||||||||| | |
Sbjct 4690458 TCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGAG 4690517
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| ||||| ||| | |||||| || |||| || ||||| || || ||||| |
Sbjct 4690518 GACTTGTAGATCTTCTCGTTGCCAAGGGCGACGAGGAGACGGTCGGCGACGAACTCAATG 4690577
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| ||| || | | ||||||||| | || || |||| ||||| | |
Sbjct 4690578 TACTGCTTCATGAGGTTGGCGTTCATGCCGAGCAGGGCGCAGGGAAGAGCCTCGGTAAGG 4690637
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTC---------CTCCACAATTGCCTTCACCTGTGCC 251793
|| |||| ||| | || || || |||| |||| ||||| || |
Sbjct 4690638 AACTCCTGCTCGATCCTGACAGCGTCGGTGATGATCTCCTCAATCACCTTC----TTGTC 4690693
Query 251794 AGAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCC 251853
| | || || || | |||| ||| || | |||| | ||| ||||||
Sbjct 4690694 GGCG-----CGGTGCTTCATGTGGGAGTGCAGCAGGCAGGCAAAGTCGGTGTGAAGACCC 4690748
Query 251854 TCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTG 251913
||||| ||| ||| | ||||||||| | |||||| ||||| | ||||| ||| |
Sbjct 4690749 TCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCCACGCTTCTTC 4690808
Query 251914 AGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
||||||||||| | | ||||| || ||| | | |||||| |||
Sbjct 4690809 AGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAAGATACCCTCAACA 4690856
Score = 102 bits (112), Expect = 2e-16
Identities = 199/292 (68%), Gaps = 4/292 (1%)
Strand=Plus/Minus
Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755
|| || || ||||| |||||||||||||||||||| || || | || || || || | |
Sbjct 1274104 GTCGGGTCCCTGTCTGGTGGTTGGAAGATGAAGCTCGCTCTGGCGCGAGCTATGCTGCAG 1274045
Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815
|| ||||||||||| ||||| || ||||| || ||||| | || |||| | ||
Sbjct 1274044 CGAGCCGATGTCCTCCTGCTGGACGAGCCGACTAACCATCTCGATGTGCTCAACATCGCG 1273985
Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGA--AGAATGTTTCTTCCCTCATTGTCTCTCACG 279873
||||| | | |||||| | |||| | || || | || || || || ||||
Sbjct 1273984 TGGCTCGAGAACTACCT--CAAGTCCCATCCCGATATTACCAGTCTGATCGTGTCCCACG 1273927
Query 279874 ACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGC 279933
||||||||||||| || ||| | | | |||| ||||| |||| || |||||
Sbjct 1273926 ACTCTGGCTTCCTGGACAACGTCACCACCGACATCTACCACTACGAGCCCAACAAGAAGC 1273867
Query 279934 TCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGC 279985
| | ||| ||||||||| |||| ||||| | ||||| |||||
Sbjct 1273866 TGGCGTGCTACAAGGGCAACCTGGCTGCCTTCGTCGAGCTCCGCCCCGAGGC 1273815
>seq4
Length=5284358
Score = 84.2 bits (92), Expect = 4e-11
Identities = 183/271 (68%), Gaps = 6/271 (2%)
Strand=Plus/Plus
Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGA---GGTCAATCACTGTCTTCAT 293171
||| | |||||| | |||||||||||||| ||||| | || ||| | || | |
Sbjct 2048964 CTGGGACTGATCAATGAAGGCACCACGATCGGCAGCCATCTGGACAACC--TGGCG-CTG 2049020
Query 293172 AGAGATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTT 293231
||| ||||||||| |||||||||| |||||||||||| | | ||| | ||
Sbjct 2049021 AGAAATCTCCCACACGGTCTTGTACAGAGCCTTGACATCATCAGGGATGTTGGGGATGTT 2049080
Query 293232 CTGGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACG 293291
|||||| || || | |||||| ||| ||||||||| || ||||| ||| |
Sbjct 2049081 CTGGATGGAGCCGTTCTCGGCAATGATCCTGTTCTTCATGCCATCAGACCAGAGACCAAG 2049140
Query 293292 AGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCG 293351
| | ||| || || || ||| |||||| || ||||||| ||||| || ||
Sbjct 2049141 CTCGACGAGGTCCTTGAGCAGCCAAGGGTTGACGACCTGGAACTCGCCAGCCAGGACACG 2049200
Query 293352 ACGGCTGTAAATGTTCGAAGTGATGGGTTCG 293382
||| ||| ||||| || ||| ||| |||
Sbjct 2049201 ACGCTGGTAGATGTTGGAGGTGTAGGGCTCG 2049231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027835851820552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |