Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq7 123 5e-23 seq1 104 5e-17 seq4 84.2 4e-11 >seq7 Length=3601230 Score = 123 bits (136), Expect = 5e-23 Identities = 468/714 (66%), Gaps = 59/714 (8%) Strand=Plus/Minus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTG----C 279760 || || |||||||||||||||||||||||||| || ||| | || || | | Sbjct 1085803 CTCTCTGGTGGTTGGAAGATGAAGCTGGCCCTGTGCCGTGCCGT----CTTCGAGGCCCC 1085748 Query 279761 CGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCT 279820 |||| |||| ||||| || ||||| |||||||| | || | ||||| ||||| Sbjct 1085747 CGATATCCTGCTGCTCGACGAGCCCACCAACCATCTCGATGTGAAGAACGTCAAGTGGCT 1085688 Query 279821 AGTGTCCTACCTAACCAG-TCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTG 279879 | | ||||| | || ||| || ||||| |||| ||||| |||||||||| Sbjct 1085687 CGAGGAGTACCTCATCAACTCTCCT---TGCA-CTTCCATCATCGTCTCCCACGACTCTG 1085632 Query 279880 GCTTCCTAGATGCCGTGTGCTCTGC-CATCATTCACTATGAGCAAAATCTGAAGCTCTCC 279938 | ||||| || ||||||| | || |||| | ||||| |||| | |||||| Sbjct 1085631 GTTTCCTCGACAACGTGTGC-CAGCACATCGTCCACTACGAGCGCT---TCAAGCTC--- 1085579 Query 279939 AAGC---ACATCGGCAACCTGTCTGCTTTCGTGGCAAA---GCGCCCTGAGGCGGCCGCC 279992 |||| ||| ||||||||| | | ||||| ||| | ||||| | | | || Sbjct 1085578 AAGCGCTACAGGGGCAACCTGGCCGAGTTCGT--CAAGCGTGTGCCCTCTGCCAGGT-CC 1085522 Query 279993 TACTATGACCTGAAGGACGCCACCGCCA---AGTGGGAATTCCCTGAGCCAGGGTTTCTG 280049 ||||| || || | ||| ||| | ||| ||||||||||| || || || Sbjct 1085521 TACTACGAGCTC---GGTGCCTCCGAGATTGAGTTCACCTTCCCTGAGCCCGGTTTCCTC 1085465 Query 280050 GAGGGCATCACATCAAAGG--------AT----CGCGCAATCATGAAGCTCCGTGGCGTC 280097 ||||| ||| | |||| || || || | || || | || | || Sbjct 1085464 GAGGGTGTCAAGACCAAGGCCAAGGCCATTCTCCGAGCCACCAAGATGA-CCTTCCAGTA 1085406 Query 280098 TCCTTTGCTTATCCCAATGGCCCCAACATCTTCAGCAGTGTCAACTCGCAGGTTTCTATG 280157 |||| | | |||| |||||| |||| | || ||| || ||| ||| || Sbjct 1085405 TCCT--GGTACCTCCAA--GCCCCAG-ATCTCCGACA---TCAGCTTCCAGTGCTCTCTG 1085354 Query 280158 AACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTC 280217 ||| || |||| ||||||||| ||||| ||||| || ||||| ||||| ||||| || Sbjct 1085353 GGCTCCCGTATTGCTGTCATTGGTCCCAACGGTGCTGGCAAGTCCACCCTGATCAACGTG 1085294 Query 280218 CTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATG 280277 || ||||| ||| | |||| ||||| | | |||| ||||| || || Sbjct 1085293 CTCACTGGTGAGCTCATCCCCACCGAGGGTGAGATCTACCAGCACGAGAACATTCGTATC 1085234 Query 280278 GCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAAC 280337 || ||| | |||||||||||| ||||||||| |||||| |||||| |||||| | Sbjct 1085233 GCCTACATTAAGCAGCACGCTTTCGCCCACATCGATAACCACTTGGACAAGACTCCCTCC 1085174 Query 280338 CAATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 | ||||| |||||||| | | || | ||| |||||| ||| | |||| || Sbjct 1085173 GAGTACATCCAGTGGCG-TTTCCAGACTGGTGAGGATCGTGAGACCATGGACCG 1085121 Score = 114 bits (126), Expect = 3e-20 Identities = 160/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||||||||| || |||| ||||| ||||| || |||| ||||| ||||| ||| Sbjct 1086166 GGTGAGGATCTCTGCAACTGCACCTTCTCCCTCGCCTACGGTGCCAAGATCCTGCTCAAC 1086107 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | |||| ||||||||||| | || || ||||| ||||||||| || | Sbjct 1086106 CAGACTCACCTCCGTCTCAAGCGTGGCCAGCGCTACGGTCTTTGCGGTCCCAACGGTTCC 1086047 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| |||||| ||||| ||||| |||| ||| | | ||| ||||| | ||| Sbjct 1086046 GGAAAGTCCACTCTCATGCGTGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 1085988 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 || ||||| | ||| |||| || |||||||| ||||||| Sbjct 1085987 GTCCGAGGTTAAGACCGTGTTCGTTGAGCACGATCTCGACTC 1085946 >seq1 Length=7437554 Score = 104 bits (114), Expect = 5e-17 Identities = 267/408 (65%), Gaps = 18/408 (4%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| | | Sbjct 4690458 TCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGAG 4690517 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| ||| | |||||| || |||| || ||||| || || ||||| | Sbjct 4690518 GACTTGTAGATCTTCTCGTTGCCAAGGGCGACGAGGAGACGGTCGGCGACGAACTCAATG 4690577 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||| || | | ||||||||| | || || |||| ||||| | | Sbjct 4690578 TACTGCTTCATGAGGTTGGCGTTCATGCCGAGCAGGGCGCAGGGAAGAGCCTCGGTAAGG 4690637 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTC---------CTCCACAATTGCCTTCACCTGTGCC 251793 || |||| ||| | || || || |||| |||| ||||| || | Sbjct 4690638 AACTCCTGCTCGATCCTGACAGCGTCGGTGATGATCTCCTCAATCACCTTC----TTGTC 4690693 Query 251794 AGAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCC 251853 | | || || || | |||| ||| || | |||| | ||| |||||| Sbjct 4690694 GGCG-----CGGTGCTTCATGTGGGAGTGCAGCAGGCAGGCAAAGTCGGTGTGAAGACCC 4690748 Query 251854 TCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTG 251913 ||||| ||| ||| | ||||||||| | |||||| ||||| | ||||| ||| | Sbjct 4690749 TCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCCACGCTTCTTC 4690808 Query 251914 AGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 ||||||||||| | | ||||| || ||| | | |||||| ||| Sbjct 4690809 AGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAAGATACCCTCAACA 4690856 Score = 102 bits (112), Expect = 2e-16 Identities = 199/292 (68%), Gaps = 4/292 (1%) Strand=Plus/Minus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || || ||||| |||||||||||||||||||| || || | || || || || | | Sbjct 1274104 GTCGGGTCCCTGTCTGGTGGTTGGAAGATGAAGCTCGCTCTGGCGCGAGCTATGCTGCAG 1274045 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 || ||||||||||| ||||| || ||||| || ||||| | || |||| | || Sbjct 1274044 CGAGCCGATGTCCTCCTGCTGGACGAGCCGACTAACCATCTCGATGTGCTCAACATCGCG 1273985 Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGA--AGAATGTTTCTTCCCTCATTGTCTCTCACG 279873 ||||| | | |||||| | |||| | || || | || || || || |||| Sbjct 1273984 TGGCTCGAGAACTACCT--CAAGTCCCATCCCGATATTACCAGTCTGATCGTGTCCCACG 1273927 Query 279874 ACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGC 279933 ||||||||||||| || ||| | | | |||| ||||| |||| || ||||| Sbjct 1273926 ACTCTGGCTTCCTGGACAACGTCACCACCGACATCTACCACTACGAGCCCAACAAGAAGC 1273867 Query 279934 TCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGC 279985 | | ||| ||||||||| |||| ||||| | ||||| ||||| Sbjct 1273866 TGGCGTGCTACAAGGGCAACCTGGCTGCCTTCGTCGAGCTCCGCCCCGAGGC 1273815 >seq4 Length=5284358 Score = 84.2 bits (92), Expect = 4e-11 Identities = 183/271 (68%), Gaps = 6/271 (2%) Strand=Plus/Plus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGA---GGTCAATCACTGTCTTCAT 293171 ||| | |||||| | |||||||||||||| ||||| | || ||| | || | | Sbjct 2048964 CTGGGACTGATCAATGAAGGCACCACGATCGGCAGCCATCTGGACAACC--TGGCG-CTG 2049020 Query 293172 AGAGATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTT 293231 ||| ||||||||| |||||||||| |||||||||||| | | ||| | || Sbjct 2049021 AGAAATCTCCCACACGGTCTTGTACAGAGCCTTGACATCATCAGGGATGTTGGGGATGTT 2049080 Query 293232 CTGGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACG 293291 |||||| || || | |||||| ||| ||||||||| || ||||| ||| | Sbjct 2049081 CTGGATGGAGCCGTTCTCGGCAATGATCCTGTTCTTCATGCCATCAGACCAGAGACCAAG 2049140 Query 293292 AGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCG 293351 | | ||| || || || ||| |||||| || ||||||| ||||| || || Sbjct 2049141 CTCGACGAGGTCCTTGAGCAGCCAAGGGTTGACGACCTGGAACTCGCCAGCCAGGACACG 2049200 Query 293352 ACGGCTGTAAATGTTCGAAGTGATGGGTTCG 293382 ||| ||| ||||| || ||| ||| ||| Sbjct 2049201 ACGCTGGTAGATGTTGGAGGTGTAGGGCTCG 2049231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835851820552