Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq3 176 8e-39 seq4 158 2e-33 seq1 138 2e-27 seq7 93.3 8e-14 >seq3 Length=5313354 Score = 176 bits (194), Expect = 8e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || ||| ||| || |||||||| || |||||| Sbjct 4707917 CCACCACGCAGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 4707976 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || || | || |||||||| || Sbjct 4707977 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 4708036 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 4708037 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 4708096 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || |||||||||||||||||||| |||||||| Sbjct 4708097 TCGAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 4708143 >seq4 Length=5284358 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| || | || ||||| ||||| || || ||||| || |||||| Sbjct 3189607 CCACCACGCAGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAG 3189666 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || || || ||||| | || |||||||| || Sbjct 3189667 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGG 3189726 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| ||| || ||||| ||||| | ||| || || Sbjct 3189727 ATGCCCTCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGACC 3189786 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| || || |||||||||||||||||||| |||||||| Sbjct 3189787 TCCAGCGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833 Score = 152 bits (168), Expect = 9e-32 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | |||| ||| ||||||||||| || || ||||| ||||||||| Sbjct 3189835 CCACCACGAAGGCGGAGGACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGAG 3189894 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || || | || || || || || Sbjct 3189895 AGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGG 3189954 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | ||| || ||||| || || | || || || Sbjct 3189955 ATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATAGTATCGGACGACTCGACC 3190014 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | ||||||||| || ||||| ||||||||||||| Sbjct 3190015 TCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 3190051 Score = 140 bits (154), Expect = 6e-28 Identities = 174/236 (74%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | || || ||||| || | || | || || || ||||| || |||||||||| Sbjct 3189371 TTTACTGGCCGCCACGAAGACGAAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTAT 3189430 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | ||| ||| || | ||||| || | |||||| || ||||| || || | || |||| Sbjct 3189431 AGTCGCTGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGT 3189490 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT- 68405 | || ||||| || |||||||| |||||||| ||| ||| || || ||||| ||| Sbjct 3189491 CAGGAGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCAATCGTGTC-GCTC 3189549 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || | |||||| || || || || |||||||||||||| |||||||| Sbjct 3189550 GACTCCACCTCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3189605 >seq1 Length=7437554 Score = 138 bits (152), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || || ||||| || | ||||| || | |||||| |||||||| || Sbjct 2326939 TTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATC 2326998 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || |||||||| || ||||| |||||||| || ||||| | |||||| ||| Sbjct 2326999 AGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 2327058 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | ||||||||| || ||||| |||||||| ||||| Sbjct 2327059 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 2327117 Score = 118 bits (130), Expect = 2e-21 Identities = 316/480 (66%), Gaps = 26/480 (5%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || | || || |||||||||||||| |||||| | Sbjct 4690421 CATGACACCAGCCTTCTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACC 4690480 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||| |||||||| || | ||| || || Sbjct 4690481 CAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGAGGACTTGTAGATCTTCTCGTTGCC 4690540 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 || || || | ||||| || |||||||| |||||||| |||| |||| | ||| Sbjct 4690541 AAGGGCGACGAGGAGACGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGTT 4690600 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | || | |||||| | || ||| || ||| |||| ||| | ||| | Sbjct 4690601 CATGCCGAGCAGGGCGCAGGGAAGAGCCTCGGTAAGGAACTCCTGCTCGATCCTGACAG- 4690659 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTC------GAGCTTC-- 10226 | ||| |||| ||| | |||| || ||| || || | ||||| Sbjct 4690660 --CGTCGGTGATGATCT------CCTCAA---TCACCTTCTTGTCGGCGCGGTGCTTCAT 4690708 Query 10227 ----GAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTC 10282 || | ||| || |||| | ||| || |||||||| || ||| | ||| Sbjct 4690709 GTGGGAGTGCAGCAGGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATCAGCTC 4690768 Query 10283 GTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAA 10342 |||||| || ||| ||||||||||| || || || ||||||||| || | | || Sbjct 4690769 GTTGGAGAAGGTCAGGCCGGGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAA 4690828 Query 10343 CGACCCGGAGAACAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 | ||| ||| | | |||||| || ||| | |||| ||||| |||| ||||||| Sbjct 4690829 GGCACCGCTGAAGAAGATACCCTCAACAGCA-GCGAAGGCAACGAGACGCTGGGCGAAGG 4690887 Score = 89.7 bits (98), Expect = 9e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || |||||||||| |||||||||||| ||| | || || || |||| | || | | | Sbjct 1273440 TAACGCCACTGGAGGTACTGGTTGGGCGTCTTCTCGAGATGCATCTCGACGTGCTCCAGA 1273499 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || ||||| | ||| | || |||| |||||| || ||| || ||| || Sbjct 1273500 GCGTGCTGCTTGATGTAGCCGATACGCAGGTTGGGGTGTTTCTCGACCTTGCCAATGGTG 1273559 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 || ||||| || ||||||| |||||| || || | |||||| ||||| |||||||| Sbjct 1273560 GGGATGGCCTCACCCGTGAGGAGCTTGATCAGGGTGGACTTGCCAGCACCGTTGGGGCCG 1273619 Query 225158 ATCACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGA 225206 || | | | | || || |||| | | ||| || ||||| ||||| Sbjct 1273620 ATGATGGCCACACGAGACGACAGGGTCAGCTGGCAGGACACGTCGCTGA 1273668 Score = 86.0 bits (94), Expect = 1e-11 Identities = 141/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGAC-GACACGTTCGTCA-GGCCCTTG 225502 ||| ||||||||||||||||||||||| || | ||| | | ||| | || |||| Sbjct 1273910 GTCCAGGAAGCCAGAGTCGTGGGACACGATCA--GACTGGTAATATCGGGATGGGACTTG 1273967 Query 225503 AGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGA 225562 |||| | |||||| || | |||| || || | ||||| || || |||||||| Sbjct 1273968 AGGTAGTTCTCGAGCCACGCGATGTTGAGCACATCGAGATGGTTAGTCGGCTCGTCCAGC 1274027 Query 225563 AGCAGGATGTCAGCATCAATG-AGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCC 225621 || |||| || || || || || || || |||| |||| |||||||| ||||| || Sbjct 1274028 AGGAGGACATCGGC-TCGCTGCAGCATAGCTCGCGCCAGAGCGAGCTTCATCTTCCAACC 1274086 Query 225622 CCCGGACAGGGAGCCGA 225638 || |||||||| |||| Sbjct 1274087 ACCAGACAGGGACCCGA 1274103 >seq7 Length=3601230 Score = 93.3 bits (102), Expect = 8e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | ||| ||| |||||| |||||| || || ||| |||||| Sbjct 1085157 CGCCACTGGATGTACTCGGAGGGAGTCTTGTCCAAGTGGTTATCGATGTGGGCGAAAGCG 1085216 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099 ||||| | ||| || || || ||||| |||| | | | | || || || Sbjct 1085217 TGCTGCTTAATGTAGGCGATACGAATGTTCTCGTGCTGGTAGATCTCACCCTCGGTGGGG 1085276 Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || | ||| || ||||| || ||||| || || | |||||| ||||| ||||| ||||| Sbjct 1085277 ATGAG-CTCACCAGTGAGCACGTTGATCAGGGTGGACTTGCCAGCACCGTTGGGACCAAT 1085335 Query 225160 CACGCCAATCCGGGA 225174 || |||| ||||| Sbjct 1085336 GACAGCAATACGGGA 1085350 Score = 87.8 bits (96), Expect = 3e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225779 TCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCA 225838 ||||| || ||| |||| ||| | || || | |||||| ||||| | ||| | Sbjct 1085955 TCGTGCTCAACGAACACGGTCTTAACCTCGGACTGCTTGGGGAAACCCTCGACCTGCTCG 1086014 Query 225839 TTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAA 225898 || || ||||| | || || ||| || | |||||||||||| || ||||| Sbjct 1086015 TTGTTGATGGCACGCATGAGAGTGGACTTTCCGGAACCGTTGGGACCGCAAAGACCGTAG 1086074 Query 225899 TGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCA 225958 | | || ||||||| |||| | || ||| || ||||||||| |||| ||||| Sbjct 1086075 CGCTGGCCACGCTTGAGACGGAGGTGAGTCTGGTTGAGCAGGATCTTGGCACCGTAGGCG 1086134 Query 225959 AGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 |||||||| ||| | ||| || |||||||||||||| Sbjct 1086135 AGGGAGAAGGTGCAGTTGCAGAGATCCTCACCCTCCTC 1086172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621570539840