Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq4 134 3e-26
seq3 134 3e-26
seq1 95.1 3e-14
>seq4
Length=5284358
Score = 134 bits (148), Expect = 3e-26
Identities = 170/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| || || || || | ||| || ||||| | || || || ||||| |||||||||
Sbjct 3189376 TGGCCGCCACGAAGACGAAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTATAGTCG 3189435
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
||| ||||| || || || | || || || |||||||| |||||||| || |
Sbjct 3189436 CTGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGA 3189495
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422
|| || || || || ||||| || || ||| |||||||| || || | |||||||| ||
Sbjct 3189496 GGAATACCCTCCTTGTCCTGAATCTT-GCTCTTCACGTTGTCAATCGTGTCGCTCGACTC 3189554
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct 3189555 CACCTCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3189605
Score = 116 bits (128), Expect = 9e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || |||||||| | ||| || || || || || ||||||| |
Sbjct 3189607 CCACCACGCAGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAG 3189666
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || || || ||||| |||||||| || |||
Sbjct 3189667 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGG 3189726
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| || || || ||||| || || ||| ||||| || || || | || || || ||
Sbjct 3189727 ATGCCCTCCTTGTCCTGAATCTT-GCTCTTCACATTGTCGATCGTGTCAGATGACTCGAC 3189785
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| |||||||||||||| || || || ||||||||||| ||||||||
Sbjct 3189786 CTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833
Score = 116 bits (128), Expect = 9e-21
Identities = 156/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || |||| |||| || || || || || || |||| |
Sbjct 3189835 CCACCACGAAGGCGGAGGACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGAG 3189894
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||| || | || || || ||||||||||| ||||| ||| |||
Sbjct 3189895 AGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGG 3189954
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || ||||| || |||| || || || || |||| |||| ||| || ||
Sbjct 3189955 ATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATAGTATCGGACGACTCGACC 3190014
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
|| || ||||| ||||| || ||||| ||||||||||
Sbjct 3190015 TCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 3190051
Score = 93.3 bits (102), Expect = 1e-13
Identities = 146/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||||||||| | || || || || | ||| || || ||||| || || |
Sbjct 3190115 CATG-CCACCGCGGAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAAT 3190173
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || ||||| ||||| || | || || || ||||| || || ||||| ||
Sbjct 3190174 CGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCGG 3190233
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||||| || || || |||||||| |||| || ||||| || |||| ||| || |
Sbjct 3190234 GAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCCGAGGACT 3190293
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGT 288449
| || ||||| ||||| ||||| || ||
Sbjct 3190294 CGACCTCGAGGGTGATGGTCTTGCCAGT 3190321
>seq3
Length=5313354
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || ||||| || | ||||| || || ||||| || ||||||| |
Sbjct 4707917 CCACCACGCAGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 4707976
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || || || ||||||||||| ||||| || |||
Sbjct 4707977 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 4708036
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| || | || ||||| || || | ||| || || ||
Sbjct 4708037 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 4708096
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| |||||||| || || ||||||||||| ||||||||
Sbjct 4708097 TCGAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 4708143
>seq1
Length=7437554
Score = 95.1 bits (104), Expect = 3e-14
Identities = 154/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178
|||||| || || ||| | || || | || |||| ||||| ||| | ||||||||
Sbjct 4690642 GAGTTCCTTACCGAGGCTCTTCCCTGCGCCCTGCTCGGCATGAACGCCAACCTCATGAAG 4690583
Query 269179 CAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTAC 269238
|| || || || ||||| || || ||| || || || || || | ||||| | |||
Sbjct 4690582 CAGTACATTGAGTTCGTCGCCGACCGTCTCCTCGTCGCCCTTGGCAACGAGAAGATCTAC 4690523
Query 269239 AATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTC 269298
|| || || ||||||| ||| ||||| || || || | || ||||| ||||||
Sbjct 4690522 AAGTCCTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTC 4690463
Query 269299 TTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATG 269340
||||| ||||| ||| |||||| || ||||||| |||
Sbjct 4690462 TTCGAGAAGCGCGTCGCCGACTACCAGAAGGCTGGTGTCATG 4690421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653311768816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |