Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4 134 3e-26 seq3 134 3e-26 seq1 95.1 3e-14 >seq4 Length=5284358 Score = 134 bits (148), Expect = 3e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || || || || | ||| || ||||| | || || || ||||| ||||||||| Sbjct 3189376 TGGCCGCCACGAAGACGAAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTATAGTCG 3189435 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 ||| ||||| || || || | || || || |||||||| |||||||| || | Sbjct 3189436 CTGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGA 3189495 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || || || || ||||| || || ||| |||||||| || || | |||||||| || Sbjct 3189496 GGAATACCCTCCTTGTCCTGAATCTT-GCTCTTCACGTTGTCAATCGTGTCGCTCGACTC 3189554 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| |||||||| ||||||||||| |||||||| Sbjct 3189555 CACCTCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3189605 Score = 116 bits (128), Expect = 9e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||| | ||| || || || || || ||||||| | Sbjct 3189607 CCACCACGCAGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAG 3189666 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || ||||| |||||||| || ||| Sbjct 3189667 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGG 3189726 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || ||||| || || ||| ||||| || || || | || || || || Sbjct 3189727 ATGCCCTCCTTGTCCTGAATCTT-GCTCTTCACATTGTCGATCGTGTCAGATGACTCGAC 3189785 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| || || || ||||||||||| |||||||| Sbjct 3189786 CTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833 Score = 116 bits (128), Expect = 9e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| |||| || || || || || || |||| | Sbjct 3189835 CCACCACGAAGGCGGAGGACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGAG 3189894 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || ||||||||||| ||||| ||| ||| Sbjct 3189895 AGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGG 3189954 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || |||| || || || || |||| |||| ||| || || Sbjct 3189955 ATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATAGTATCGGACGACTCGACC 3190014 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 || || ||||| ||||| || ||||| |||||||||| Sbjct 3190015 TCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 3190051 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||||||||| | || || || || | ||| || || ||||| || || | Sbjct 3190115 CATG-CCACCGCGGAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAAT 3190173 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || ||||| ||||| || | || || || ||||| || || ||||| || Sbjct 3190174 CGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCGG 3190233 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || |||||||| |||| || ||||| || |||| ||| || | Sbjct 3190234 GAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCCGAGGACT 3190293 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGT 288449 | || ||||| ||||| ||||| || || Sbjct 3190294 CGACCTCGAGGGTGATGGTCTTGCCAGT 3190321 >seq3 Length=5313354 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | ||||| || || ||||| || ||||||| | Sbjct 4707917 CCACCACGCAGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 4707976 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || ||||||||||| ||||| || ||| Sbjct 4707977 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 4708036 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | ||| || || || Sbjct 4708037 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 4708096 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| || || ||||||||||| |||||||| Sbjct 4708097 TCGAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 4708143 >seq1 Length=7437554 Score = 95.1 bits (104), Expect = 3e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178 |||||| || || ||| | || || | || |||| ||||| ||| | |||||||| Sbjct 4690642 GAGTTCCTTACCGAGGCTCTTCCCTGCGCCCTGCTCGGCATGAACGCCAACCTCATGAAG 4690583 Query 269179 CAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTAC 269238 || || || || ||||| || || ||| || || || || || | ||||| | ||| Sbjct 4690582 CAGTACATTGAGTTCGTCGCCGACCGTCTCCTCGTCGCCCTTGGCAACGAGAAGATCTAC 4690523 Query 269239 AATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTC 269298 || || || ||||||| ||| ||||| || || || | || ||||| |||||| Sbjct 4690522 AAGTCCTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTC 4690463 Query 269299 TTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATG 269340 ||||| ||||| ||| |||||| || ||||||| ||| Sbjct 4690462 TTCGAGAAGCGCGTCGCCGACTACCAGAAGGCTGGTGTCATG 4690421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653311768816