Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq3 111 1e-19 seq4 104 2e-17 seq1 100 3e-16 >seq3 Length=5313354 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| ||| | ||||| ||| || ||||| || || ||| | Sbjct 4707952 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 4708011 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||||| |||||||| ||||| || ||||||||||||||| ||| || ||||| ||| Sbjct 4708012 GATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 4708071 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 | |||| |||||| | | ||| || |||| ||| | || || || || || || || | Sbjct 4708072 G-TCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCCGTGAGGGTCTTGA 4708130 Query 127101 CAAAAATCTGCAT 127113 | ||||||||||| Sbjct 4708131 CGAAAATCTGCAT 4708143 >seq4 Length=5284358 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||| | ||| | ||| ||||| || ||||| ||||| ||| Sbjct 3189607 CCACCACGCAGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAG 3189666 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || ||||| |||| | |||||||| ||||| || Sbjct 3189667 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGG 3189726 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||| | | |||| ||||| | |||||| Sbjct 3189727 ATGCCCTCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGACC 3189786 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||| || || || || || || || || |||||||| Sbjct 3189787 TCCAGCGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || || || |||| | |||||| ||| || ||||| || ||| Sbjct 3189409 GTAGACTCCTTCTGGATGTTATAGTCGCTGAGGGTGCGACCATCCTCCAGCTGCTTACCA 3189468 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| || |||||||||||| || || ||| Sbjct 3189469 GCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGCTCTTC 3189528 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||||| | ||| || || | ||| | || ||||||||||| || Sbjct 3189529 ACGTTG-TCAATCGTGTCGCTCGACTCCACCTCTAGGGTGATAGTCTTGCCGGTCAGGGT 3189587 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 3189588 CTTGACGAAGATCTGCAT 3189605 Score = 100 bits (110), Expect = 3e-16 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||||||| | ||||| || || ||||| || ||| Sbjct 3190149 GTGGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCA 3190208 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | || | |||||||| |||||||| ||||||||||||||| ||| ||| |||| Sbjct 3190209 GCGAAAATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 3190268 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | |||| |||| || |||| |||||| |||| ||| | || ||||| || Sbjct 3190269 ACGTTG-TCGATAGTATCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 3190321 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||| || | ||| ||||| || ||||| ||||||||| Sbjct 3189835 CCACCACGAAGGCGGAGGACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGAG 3189894 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || |||||| |||||| ||||||||||| || || Sbjct 3189895 AGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGG 3189954 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || ||| ||| | | |||| || || | |||||| Sbjct 3189955 ATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATAGTATCGGACGACTCGACC 3190014 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 || | ||| | || ||||| ||||| || || || Sbjct 3190015 TCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 3190049 >seq1 Length=7437554 Score = 100 bits (110), Expect = 3e-16 Identities = 241/365 (66%), Gaps = 21/365 (6%) Strand=Plus/Minus Query 47223 ATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAAC 47282 ||||||||||| || || ||||||||| ||||| | ||||| || || |||||| || Sbjct 4690792 ATGCCCGGCCTGACCTTCTCCAACGAGCTGATCTCTCGTGACGAGGGTCTTCACACCGAC 4690733 Query 47283 TTTGCCTGTCT-CT--ACTACAACACTA------GAGTCGATCAAAAGTTGGACGTGCCC 47333 |||||||| || || ||| | ||| | | | ||| | ||| || | | Sbjct 4690732 TTTGCCTGCCTGCTGCACTCCCACATGAAGCACCGCGCCGACAAGAAGGTGATTGAGGAG 4690673 Query 47334 ACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCT 47393 | | ||| |||| || ||| || ||| |||||| | |||||||| Sbjct 4690672 ATCATCACCGAC------------GCTGTCAGGATCGAGCAGGAGTTCCTTACCGAGGCT 4690625 Query 47394 CTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTC 47453 || ||| | | | || |||||||| | | |||| ||||||| || || ||| Sbjct 4690624 CTTCCCTGCGCCCTGCTCGGCATGAACGCCAACCTCATGAAGCAGTACATTGAGTTCGTC 4690565 Query 47454 GCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTC 47513 |||||||| || ||||| || | ||||| ||| | || || || ||| Sbjct 4690564 GCCGACCGTCTCCTCGTCGCCCTTGGCAACGAGAAGATCTACAAGTCCTCCAACCCCTTC 4690505 Query 47514 GAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGC 47573 || || ||| | ||||| || || | |||||||||||||| |||||||||||||||| | Sbjct 4690504 GACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGCC 4690445 Query 47574 GAATA 47578 || || Sbjct 4690444 GACTA 4690440 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 126950 GTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATG 127009 ||||| ||| || ||||| || || ||| | |||| |||||||| ||||| || ||| Sbjct 2326963 GTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATG 2327022 Query 127010 CCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCG 127069 |||||||||||| ||| ||| ||||| | |||| |||||||| |||||| || Sbjct 2327023 CCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCA 2327082 Query 127070 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 | ||| | || ||||| ||||| || || || ||| Sbjct 2327083 AGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 2327118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500372049280