Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq4 132 1e-25 seq3 116 9e-21 seq1 95.1 3e-14 >seq4 Length=5284358 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || || || || ||||||||||| || | ||||||||| | | || Sbjct 3189613 CGCAGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTG 3189672 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || || |||||||||||||||||||| || || || Sbjct 3189673 CGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCC 3189732 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| |||||| |||| ||||| | || || || |||| | Sbjct 3189733 TCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGACCTCCAGC 3189792 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||||||||||||||| || || || || || || Sbjct 3189793 GTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTG 3189830 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | |||||||| ||||| || |||||||| |||| ||| ||||| | || Sbjct 3189385 CGAAGACGAAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTATAGTCGCTGAGGGTG 3189444 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| ||||||||||| || |||||||| |||||||||||||| ||| ||| || Sbjct 3189445 CGACCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCC 3189504 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||||||| || | ||||| | | || || || | Sbjct 3189505 TCCTTGTCCTGAATCTTGCTCTTCACGTTGTCAATCGTGTCGCTCGACTCCACCTCTAGG 3189564 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || || || || || || || Sbjct 3189565 GTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTG 3189602 Score = 104 bits (114), Expect = 6e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || |||||||| |||| |||||| || | | ||| | || || Sbjct 3190134 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCGTCC 3190193 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||| ||||| ||||||||||| ||| || || || ||| Sbjct 3190194 TCAAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 3190253 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| || || | | || || || | ||||| ||| Sbjct 3190254 TGGATCTTCGACTTGACGTTGTCGATAGTATCCGAGGACTCGACCTCGAGGGTGATGGTC 3190313 Query 199598 TTACCCGTGA 199607 || || |||| Sbjct 3190314 TTGCCAGTGA 3190323 Score = 89.7 bits (98), Expect = 1e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| ||||| || || |||||||| || | |||||| || | | || Sbjct 3189841 CGAAGGCGGAGGACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGAGAGGGTT 3189900 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || |||||||| || |||||||| ||||| || || Sbjct 3189901 CGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGGATGCCC 3189960 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| || |||| || || | | || || || | Sbjct 3189961 TCCTTGTCCTGAATCTTCGACTTAACATTGTCGATAGTATCGGACGACTCGACCTCAAGG 3190020 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 ||||| ||||| ||||| || || || || Sbjct 3190021 GTGATGGTCTTGCCCGTCAGGGTCTTGAC 3190049 >seq3 Length=5313354 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| || |||||| |||| ||||||||| | | || | ||||| Sbjct 4707932 AGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 4707991 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| || ||||||||||| || || || || ||| Sbjct 4707992 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 4708051 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 4708052 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 4708111 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || ||||| || Sbjct 4708112 TTCCCCGTGAGGGTCTTGACGAAAATCTG 4708140 >seq1 Length=7437554 Score = 95.1 bits (104), Expect = 3e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||||| | || | ||||| || |||||||| |||||||| | Sbjct 2326937 CCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 2326996 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || ||||||||||| || || || || ||||| ||||| ||| || | Sbjct 2326997 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 2327056 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | ||||| ||||| ||||| || || ||||| | Sbjct 2327057 CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 2327116 Query 199620 AA 199621 || Sbjct 2327117 AA 2327118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920512444824