Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3 152 6e-32 seq4 138 1e-27 seq1 132 5e-26 >seq3 Length=5313354 Score = 152 bits (168), Expect = 6e-32 Identities = 165/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || || | || |||||||| ||||| ||||||||||| || ||||| | || || Sbjct 4707934 CACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTC 4707993 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| |||| |||||||||||||| || | || |||||||||| Sbjct 4707994 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTG 4708053 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 |||||| ||||| ||| | | | |||||| || ||||| || | ||||| || | Sbjct 4708054 GATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCT 4708112 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598 | ||||| || || || || || || ||||| |||| Sbjct 4708113 TCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGC 4708148 >seq4 Length=5284358 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||| ||||||| || |||||| || || ||||||||||| || ||||| | Sbjct 3189618 ACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACC 3189677 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| ||||||||||| || || || || | ||||||||||||| ||| | || |||||| Sbjct 3189678 GTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTT 3189737 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| ||||| |||| | | | | |||||| || || || |||| |||||| Sbjct 3189738 GTCCTGAATCTTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGACCTCCAGCGTGAT 3189797 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || ||||| || || || || ||||| ||||| Sbjct 3189798 CGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| |||||| ||||| || |||||| || ||||| | || || Sbjct 3189397 ACAAGATGGAGGGTAGACTCCTTCTGGATGTTATAGTCGCTGAGGGTGCGACCATCCTCC 3189456 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || ||||| || | ||||||||||| | || | | |||||||||| Sbjct 3189457 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 3189516 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| |||| | ||| | | | |||||||||||| ||||| || | ||||| || || Sbjct 3189517 ATCTTGCTCTTCA-CGTTGTCAATCGTGTCGCTCGACTCCACCTCTAGGGTGATAGTCTT 3189575 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || ||||| ||||| Sbjct 3189576 GCCGGTCAGGGTCTTGACGAAGATCTGCAT 3189605 Score = 118 bits (130), Expect = 1e-21 Identities = 129/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| ||||| |||||||| |||| || ||||||||||| ||||| Sbjct 3190154 CTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 3190213 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||||| || | || |||||||||| ||||||| ||||| ||| Sbjct 3190214 AATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 3190272 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | || || || || || || | |||||||| ||||| || Sbjct 3190273 TGTCGATAGTATCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 3190321 Score = 109 bits (120), Expect = 6e-19 Identities = 132/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||| ||||| || || || |||| || ||||||||||| ||||| Sbjct 3189870 CTCCTTCTGAATGTTGTAATCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 3189929 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||| || | || | || |||||||||| |||||| ||| | | Sbjct 3189930 GATCAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTAACATT 3189989 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || ||| ||| || || || | |||||||| ||||||||||| || || || Sbjct 3189990 GTCGATAGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 3190049 >seq1 Length=7437554 Score = 132 bits (146), Expect = 5e-26 Identities = 138/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| |||||||| || || ||||| | || |||||||||||||||||||| | Sbjct 2326937 CCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 2326996 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||||| || | || |||||||||| ||||||| ||||| | Sbjct 2326997 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 2327056 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||||| || || || || | |||||||| ||||||||||| || || || | Sbjct 2327057 CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 2327116 Query 46584 A 46584 | Sbjct 2327117 A 2327117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237891285440