Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq3 152 6e-32
seq4 138 1e-27
seq1 132 5e-26
>seq3
Length=5313354
Score = 152 bits (168), Expect = 6e-32
Identities = 165/216 (76%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||| || || | || |||||||| ||||| ||||||||||| || ||||| | || ||
Sbjct 4707934 CACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTC 4707993
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|||||||||||||||||| |||| |||||||||||||| || | || ||||||||||
Sbjct 4707994 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTG 4708053
Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562
|||||| ||||| ||| | | | |||||| || ||||| || | ||||| || |
Sbjct 4708054 GATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCT 4708112
Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598
| ||||| || || || || || || ||||| ||||
Sbjct 4708113 TCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGC 4708148
>seq4
Length=5284358
Score = 138 bits (152), Expect = 1e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| ||| ||||||| || |||||| || || ||||||||||| || ||||| |
Sbjct 3189618 ACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACC 3189677
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| ||||||||||| || || || || | ||||||||||||| ||| | || ||||||
Sbjct 3189678 GTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTT 3189737
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| ||||| |||| | | | | |||||| || || || |||| ||||||
Sbjct 3189738 GTCCTGAATCTTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGACCTCCAGCGTGAT 3189797
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || ||||| || || || || ||||| |||||
Sbjct 3189798 CGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833
Score = 123 bits (136), Expect = 3e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||| | ||| |||||| ||||| || |||||| || ||||| | || ||
Sbjct 3189397 ACAAGATGGAGGGTAGACTCCTTCTGGATGTTATAGTCGCTGAGGGTGCGACCATCCTCC 3189456
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || ||||| || | ||||||||||| | || | | ||||||||||
Sbjct 3189457 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 3189516
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| |||| | ||| | | | |||||||||||| ||||| || | ||||| || ||
Sbjct 3189517 ATCTTGCTCTTCA-CGTTGTCAATCGTGTCGCTCGACTCCACCTCTAGGGTGATAGTCTT 3189575
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| ||||| || || || ||||| |||||
Sbjct 3189576 GCCGGTCAGGGTCTTGACGAAGATCTGCAT 3189605
Score = 118 bits (130), Expect = 1e-21
Identities = 129/169 (76%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| ||||| |||||||| |||| || ||||||||||| |||||
Sbjct 3190154 CTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 3190213
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | |||||||||||||| || | || |||||||||| ||||||| ||||| |||
Sbjct 3190214 AATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 3190272
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | | || || || || || || | |||||||| ||||| ||
Sbjct 3190273 TGTCGATAGTATCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 3190321
Score = 109 bits (120), Expect = 6e-19
Identities = 132/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || ||||| ||||| || || || |||| || ||||||||||| |||||
Sbjct 3189870 CTCCTTCTGAATGTTGTAATCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 3189929
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| ||||||||| || | || | || |||||||||| |||||| ||| | |
Sbjct 3189930 GATCAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTAACATT 3189989
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | || ||| ||| || || || | |||||||| ||||||||||| || || ||
Sbjct 3189990 GTCGATAGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 3190049
>seq1
Length=7437554
Score = 132 bits (146), Expect = 5e-26
Identities = 138/181 (76%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| |||||||| || || ||||| | || |||||||||||||||||||| |
Sbjct 2326937 CCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 2326996
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||||| || | || |||||||||| ||||||| ||||| |
Sbjct 2326997 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 2327056
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | ||||| || || || || | |||||||| ||||||||||| || || || |
Sbjct 2327057 CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 2327116
Query 46584 A 46584
|
Sbjct 2327117 A 2327117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565237891285440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |