Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1 167 2e-36
seq3 131 2e-25
seq4 129 6e-25
>seq1
Length=7437554
Score = 167 bits (184), Expect = 2e-36
Identities = 335/484 (69%), Gaps = 16/484 (3%)
Strand=Plus/Plus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
||||| || || || || || || ||| ||| ||| | ||| || || |||||||||
Sbjct 4690455 TTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 4690514
Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741
| | |||||| ||| | |||| | || ||||||| || | |||||| ||||||
Sbjct 4690515 GAGGACTTGTAGATCTTCTCGTTGCCAA---GGGCGACGAGGAGACGGTCGGCGACGAAC 4690571
Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTT 132799
|| ||||| ||| |||| | || || | | | || ||||| |||| || || || |
Sbjct 4690572 TCAATGTACTGCTTCATGAGGTTGGCGTTCATG-CCGAGCAGGGCGCAG-GGAAGAGCCT 4690629
Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859
|||| || || |||||||| ||| |||||||||| ||| ||| || | |
Sbjct 4690630 CGGTAAGGAACTCCTGCTCGATCCTGACAGCGTCGGTGATGATCTCCTCAATCACCTTCT 4690689
Query 132860 CGCTCGGC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918
| ||||| || ||| || || | || || ||| ||||||||| || | |||
Sbjct 4690690 TG-TCGGCGCGGTGCTTCATGTGGGAGTGCAGCAGGCAGGCAAAGTCGGTGTGAAGACCC 4690748
Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978
||||| | || || || |||||| ||| |||| ||||||||||||||| || || ||
Sbjct 4690749 TCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCCACGCTTCTTC 4690808
Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038
||||| || || | ||| || || ||||||| ||||| || || ||||| ||
Sbjct 4690809 AGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAAGATACCCTCAACAGCAGCGAAGGCA 4690868
Query 133039 ACCAGGCGCTCGCCGAACGT-GGCTTCTT-TGCTGGCGATCCAGCGCAGCGCCCATTCGG 133096
|| || |||| | |||| || | || ||| | ||| ||||||||| | ||||| ||||
Sbjct 4690869 ACGAGACGCTGGGCGAAGGTAGACTCCTTGTCCTG--GATCCAGCGGATGGCCCAGTCGG 4690926
Query 133097 CCTT 133100
||||
Sbjct 4690927 CCTT 4690930
Score = 163 bits (180), Expect = 3e-35
Identities = 202/276 (73%), Gaps = 3/276 (1%)
Strand=Plus/Plus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||||||||||||||| ||| || | || ||||| | ||||||||| ||| || ||
Sbjct 4691051 GTAGGTGTCGATGAGCAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAA 4691110
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
|||||| ||||| || ||||| | ||| || || ||| ||||| || || ||
Sbjct 4691111 GCCGTAGAAGCAGCGGGCCTCAGGAATCTGGACCTCGCCGCTGAAGCGCTCAACGAGGTT 4691170
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
||||||||||||||||| ||||||||| ||||| || | ||| |||||| |
Sbjct 4691171 CTCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCGAGGATGTGAGAGATGAAGTACTT 4691230
Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
||| | |||||| | ||| | ||||||| | |||||||| || || | ||||||
Sbjct 4691231 CTCATCGTCGTTGATGCGATTGTTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCCTC 4691290
Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| |||||||||| || |||||||| || ||||||||
Sbjct 4691291 GGCGGTCCAAAAAGAGGCCTCGGCCTTCTTGTACAT 4691326
Score = 120 bits (132), Expect = 3e-22
Identities = 135/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||| ||||||||| | || |||||| || | |||| | |
Sbjct 2327117 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATC 2327058
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| ||||| || ||| ||||||| ||||| ||
Sbjct 2327057 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTG 2326998
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|||| ||| ||||| ||||| || || | ||||||||| |||||||||||||| |||
Sbjct 2326997 ATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCTGACTACAACATCCAGAAG 2326938
Query 38433 G 38433
|
Sbjct 2326937 G 2326937
>seq3
Length=5313354
Score = 131 bits (144), Expect = 2e-25
Identities = 164/220 (75%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || |||||||| || || |||||| |||| || ||| |
Sbjct 4708146 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 4708087
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|||||| | | | |||| | || || |||| ||||| ||||| || ||| ||||
Sbjct 4708086 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 4708028
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| || || | ||| ||||| ||||| || || | ||||||||| ||||||
Sbjct 4708027 CCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTA 4707968
Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458
||||||||| ||||| ||| || || || | ||||| ||
Sbjct 4707967 CAACATCCAGAAGGAGAGC-ACCCTCCACCTCGTGCTCCG 4707929
>seq4
Length=5284358
Score = 129 bits (142), Expect = 6e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || |||||||| || || ||||| | || |||||| | |
Sbjct 3189833 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTCGAGTCATCT 3189774
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| || | | | |||| || || | ||||| ||||| || || |||||||
Sbjct 3189773 GACA-CGATCGACAATGTGAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCA 3189715
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | || || || ||||| || |||| ||||||||| |||||||||
Sbjct 3189714 GCAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAA 3189655
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| || ||||| ||||||||||| | ||||||||| || | || ||
Sbjct 3189654 CATTCAGAAGGAGTCGACGCTGCATCTCGTGCTGCGTCTGCGTGGTGG 3189607
Score = 105 bits (116), Expect = 7e-18
Identities = 127/170 (75%), Gaps = 2/170 (1%)
Strand=Plus/Minus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324
|||| ||||| ||||||||| |||| |||||| || | || | | | |||| | ||
Sbjct 3190323 TCACTGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGATACTATCGACAACG-TCAAG 3190265
Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384
|| |||| ||||| ||||| || || ||||||| ||||| ||||||| ||| |||
Sbjct 3190264 TCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTCATTTTCGCTGGC 3190205
Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434
|| ||||| || |||| ||||| || ||| ||||||||||| |||||
Sbjct 3190204 AAGCAGCTTGAGGACGGCCGCACTCTTTCCGATTACAACATCCAGAAGGA 3190155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172349844480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |