Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 167 2e-36 seq3 131 2e-25 seq4 129 6e-25 >seq1 Length=7437554 Score = 167 bits (184), Expect = 2e-36 Identities = 335/484 (69%), Gaps = 16/484 (3%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || ||| ||| ||| | ||| || || ||||||||| Sbjct 4690455 TTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 4690514 Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | |||||| ||| | |||| | || ||||||| || | |||||| |||||| Sbjct 4690515 GAGGACTTGTAGATCTTCTCGTTGCCAA---GGGCGACGAGGAGACGGTCGGCGACGAAC 4690571 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTT 132799 || ||||| ||| |||| | || || | | | || ||||| |||| || || || | Sbjct 4690572 TCAATGTACTGCTTCATGAGGTTGGCGTTCATG-CCGAGCAGGGCGCAG-GGAAGAGCCT 4690629 Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859 |||| || || |||||||| ||| |||||||||| ||| ||| || | | Sbjct 4690630 CGGTAAGGAACTCCTGCTCGATCCTGACAGCGTCGGTGATGATCTCCTCAATCACCTTCT 4690689 Query 132860 CGCTCGGC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918 | ||||| || ||| || || | || || ||| ||||||||| || | ||| Sbjct 4690690 TG-TCGGCGCGGTGCTTCATGTGGGAGTGCAGCAGGCAGGCAAAGTCGGTGTGAAGACCC 4690748 Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978 ||||| | || || || |||||| ||| |||| ||||||||||||||| || || || Sbjct 4690749 TCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCCACGCTTCTTC 4690808 Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038 ||||| || || | ||| || || ||||||| ||||| || || ||||| || Sbjct 4690809 AGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAAGATACCCTCAACAGCAGCGAAGGCA 4690868 Query 133039 ACCAGGCGCTCGCCGAACGT-GGCTTCTT-TGCTGGCGATCCAGCGCAGCGCCCATTCGG 133096 || || |||| | |||| || | || ||| | ||| ||||||||| | ||||| |||| Sbjct 4690869 ACGAGACGCTGGGCGAAGGTAGACTCCTTGTCCTG--GATCCAGCGGATGGCCCAGTCGG 4690926 Query 133097 CCTT 133100 |||| Sbjct 4690927 CCTT 4690930 Score = 163 bits (180), Expect = 3e-35 Identities = 202/276 (73%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||||||||||||||| ||| || | || ||||| | ||||||||| ||| || || Sbjct 4691051 GTAGGTGTCGATGAGCAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAA 4691110 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||| ||||| || ||||| | ||| || || ||| ||||| || || || Sbjct 4691111 GCCGTAGAAGCAGCGGGCCTCAGGAATCTGGACCTCGCCGCTGAAGCGCTCAACGAGGTT 4691170 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 ||||||||||||||||| ||||||||| ||||| || | ||| |||||| | Sbjct 4691171 CTCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCGAGGATGTGAGAGATGAAGTACTT 4691230 Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||| | |||||| | ||| | ||||||| | |||||||| || || | |||||| Sbjct 4691231 CTCATCGTCGTTGATGCGATTGTTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCCTC 4691290 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | |||||||||| || |||||||| || |||||||| Sbjct 4691291 GGCGGTCCAAAAAGAGGCCTCGGCCTTCTTGTACAT 4691326 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| | || |||||| || | |||| | | Sbjct 2327117 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATC 2327058 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| ||||||| ||||| || Sbjct 2327057 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTG 2326998 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 |||| ||| ||||| ||||| || || | ||||||||| |||||||||||||| ||| Sbjct 2326997 ATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCTGACTACAACATCCAGAAG 2326938 Query 38433 G 38433 | Sbjct 2326937 G 2326937 >seq3 Length=5313354 Score = 131 bits (144), Expect = 2e-25 Identities = 164/220 (75%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || |||||||| || || |||||| |||| || ||| | Sbjct 4708146 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 4708087 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| || ||| |||| Sbjct 4708086 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 4708028 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| || || | ||| ||||| ||||| || || | ||||||||| |||||| Sbjct 4708027 CCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTA 4707968 Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| ||| || || || | ||||| || Sbjct 4707967 CAACATCCAGAAGGAGAGC-ACCCTCCACCTCGTGCTCCG 4707929 >seq4 Length=5284358 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || || ||||| | || |||||| | | Sbjct 3189833 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTCGAGTCATCT 3189774 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | |||| || || | ||||| ||||| || || ||||||| Sbjct 3189773 GACA-CGATCGACAATGTGAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCA 3189715 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || || || ||||| || |||| ||||||||| ||||||||| Sbjct 3189714 GCAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAA 3189655 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || ||||| ||||||||||| | ||||||||| || | || || Sbjct 3189654 CATTCAGAAGGAGTCGACGCTGCATCTCGTGCTGCGTCTGCGTGGTGG 3189607 Score = 105 bits (116), Expect = 7e-18 Identities = 127/170 (75%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| |||| |||||| || | || | | | |||| | || Sbjct 3190323 TCACTGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGATACTATCGACAACG-TCAAG 3190265 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 || |||| ||||| ||||| || || ||||||| ||||| ||||||| ||| ||| Sbjct 3190264 TCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTCATTTTCGCTGGC 3190205 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 || ||||| || |||| ||||| || ||| ||||||||||| ||||| Sbjct 3190204 AAGCAGCTTGAGGACGGCCGCACTCTTTCCGATTACAACATCCAGAAGGA 3190155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172349844480