Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3 100 2e-16 seq4 98.7 6e-16 seq1 86.0 4e-12 >seq3 Length=5313354 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| ||||| || ||| | || |||| || ||||| || ||| Sbjct 4707947 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 4708006 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || || || || |||||||| | || | ||||||||||| ||||| ||| Sbjct 4708007 GCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 4708066 Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964 ||| | || | || | ||| || |||| ||| || || || |||||||| ||| Sbjct 4708067 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCCGTGAGGGTC 4708126 Query 34965 TTCACAAAGATCTGCATATT 34984 || || || |||||||| || Sbjct 4708127 TTGACGAAAATCTGCATCTT 4708146 >seq4 Length=5284358 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || ||| | || | || || ||||| || || ||||| Sbjct 3189643 TCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAG 3189702 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| |||||| || || Sbjct 3189703 ATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTGCTCTTCACATTG 3189762 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||| | ||| || || | || || || || |||||||| ||||| || Sbjct 3189763 TCGATCGTGTCAGATGACTCGACCTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTGACG 3189822 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 3189823 AAGATCTGCATA 3189834 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||||||||| ||| | || |||| |||||||| || || || || Sbjct 3189415 TCCTTCTGGATGTTATAGTCGCTGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAG 3189474 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| || ||| Sbjct 3189475 ATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTG 3189534 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | | ||| || || | ||| || || || || || || ||||| || Sbjct 3189535 TCAATCGTGTCGCTCGACTCCACCTCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACG 3189594 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 3189595 AAGATCTGCATA 3189606 >seq1 Length=7437554 Score = 86.0 bits (94), Expect = 4e-12 Identities = 135/191 (71%), Gaps = 8/191 (4%) Strand=Plus/Plus Query 34786 TGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGG 34845 |||| | ||||| ||||| ||||| || ||| | || |||| || ||||| || |||| Sbjct 2326931 TGCTAACCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGG 2326990 Query 34846 CAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGA 34905 | || || || || |||||||| | || | ||||||||||| |||||| |||| Sbjct 2326991 CGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA 2327050 Query 34906 CGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGA 34961 | || | ||||| || || ||| || || | ||| ||||| || ||||| || Sbjct 2327051 C--AT--TGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGG 2327106 Query 34962 GTCTTCACAAA 34972 |||||||| || Sbjct 2327107 GTCTTCACGAA 2327117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633315134016