Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq3 100 2e-16
seq4 98.7 6e-16
seq1 86.0 4e-12
>seq3
Length=5313354
Score = 100 bits (110), Expect = 2e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844
||||| || ||||| ||||| ||||| || ||| | || |||| || ||||| || |||
Sbjct 4707947 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 4708006
Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904
|| || || || || |||||||| | || | ||||||||||| ||||| |||
Sbjct 4708007 GCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 4708066
Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964
||| | || | || | ||| || |||| ||| || || || |||||||| |||
Sbjct 4708067 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCCGTGAGGGTC 4708126
Query 34965 TTCACAAAGATCTGCATATT 34984
|| || || |||||||| ||
Sbjct 4708127 TTGACGAAAATCTGCATCTT 4708146
>seq4
Length=5284358
Score = 98.7 bits (108), Expect = 6e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| ||||| || ||| | || | || || ||||| || || |||||
Sbjct 3189643 TCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAG 3189702
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| |||| | ||||||||||| |||||| || ||
Sbjct 3189703 ATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTGCTCTTCACATTG 3189762
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| |||| ||| | ||| || || | || || || || |||||||| ||||| ||
Sbjct 3189763 TCGATCGTGTCAGATGACTCGACCTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTGACG 3189822
Query 34971 AAGATCTGCATA 34982
||||||||||||
Sbjct 3189823 AAGATCTGCATA 3189834
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||||||||| ||| | || |||| |||||||| || || || ||
Sbjct 3189415 TCCTTCTGGATGTTATAGTCGCTGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAG 3189474
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | ||||||||||| |||||| || |||
Sbjct 3189475 ATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTG 3189534
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| |||| || | | ||| || || | ||| || || || || || || ||||| ||
Sbjct 3189535 TCAATCGTGTCGCTCGACTCCACCTCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACG 3189594
Query 34971 AAGATCTGCATA 34982
||||||||||||
Sbjct 3189595 AAGATCTGCATA 3189606
>seq1
Length=7437554
Score = 86.0 bits (94), Expect = 4e-12
Identities = 135/191 (71%), Gaps = 8/191 (4%)
Strand=Plus/Plus
Query 34786 TGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGG 34845
|||| | ||||| ||||| ||||| || ||| | || |||| || ||||| || ||||
Sbjct 2326931 TGCTAACCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGG 2326990
Query 34846 CAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGA 34905
| || || || || |||||||| | || | ||||||||||| |||||| ||||
Sbjct 2326991 CGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA 2327050
Query 34906 CGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGA 34961
| || | ||||| || || ||| || || | ||| ||||| || ||||| ||
Sbjct 2327051 C--AT--TGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGG 2327106
Query 34962 GTCTTCACAAA 34972
|||||||| ||
Sbjct 2327107 GTCTTCACGAA 2327117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633315134016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |