Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1 134 1e-26 >seq1 Length=7437554 Score = 134 bits (148), Expect = 1e-26 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 29778 GGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTC 29837 |||||| | ||| ||||| |||| |||| || ||||| || ||||||||| ||||| Sbjct 5294990 GGGCTCGCGCTCCAGCTGCGTCTCGAGCGCCTCGACGTGGTCGCAGTAGACGTGGGCGTC 5294931 Query 29838 TCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACG 29896 |||| | ||| | || || ||||| | ||| || |||||| || ||||||| || Sbjct 5294930 GCCCATGACGTGCGTCAGGCTG-CCCGGCACGAGCTCGCAGACGTGCGCGATCATGTGCG 5294872 Query 29897 TGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCT 29956 ||||||| | |||||| |||||||| ||||| || ||||| |||||||| | || | || Sbjct 5294871 TGAGGAGCGCGTAGCTCGCGATGTTGAAGGGGACGCCGAGGCCCATGTCGCAGGAGCGCT 5294812 Query 29957 GGTAGAGCTGACA 29969 |||||||||| || Sbjct 5294811 GGTAGAGCTGGCA 5294799 Score = 105 bits (116), Expect = 5e-18 Identities = 191/274 (70%), Gaps = 8/274 (3%) Strand=Plus/Minus Query 30114 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 30173 |||||| || || ||| |||| ||||| | | || || |||||| || || || Sbjct 5294567 CAGCTGGTCGACGCCCTGACCCGTATAGTCCGTCTTCGCATCGACGTACTCGGCGCCAAA 5294508 Query 30174 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30233 |||| |||||||||||||||||| || |||||||| ||| | ||||||||| || ||| Sbjct 5294507 GTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCACCTCCCTGTGCGAGAGGCC 5294448 Query 30234 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA--CCCCCTTCTCG 30291 | |||||| || || | || |||||| |||||||||| | ||| | || | Sbjct 5294447 CACGCTGTCCAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATGCGCACGCCCGCGTCGCT 5294388 Query 30292 GAGAGC--TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30349 ||| || | | || | ||| |||| || |||||| || ||||| | | ||||| Sbjct 5294387 GAGGGCGAGCGACGACGTGT-TGG--CCTC-GATGAACCAGAGGAGCTCGGCGAGGACGG 5294332 Query 30350 CCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 | ||||| | ||| |||||||||||||| Sbjct 5294331 CGCGGGTGAAGACGCGCTTCGTCGTGAGGAGGGG 5294298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617241438056