Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 1e-26
>seq1
Length=7437554
Score = 134 bits (148), Expect = 1e-26
Identities = 147/193 (76%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 29778 GGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTC 29837
|||||| | ||| ||||| |||| |||| || ||||| || ||||||||| |||||
Sbjct 5294990 GGGCTCGCGCTCCAGCTGCGTCTCGAGCGCCTCGACGTGGTCGCAGTAGACGTGGGCGTC 5294931
Query 29838 TCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACG 29896
|||| | ||| | || || ||||| | ||| || |||||| || ||||||| ||
Sbjct 5294930 GCCCATGACGTGCGTCAGGCTG-CCCGGCACGAGCTCGCAGACGTGCGCGATCATGTGCG 5294872
Query 29897 TGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCT 29956
||||||| | |||||| |||||||| ||||| || ||||| |||||||| | || | ||
Sbjct 5294871 TGAGGAGCGCGTAGCTCGCGATGTTGAAGGGGACGCCGAGGCCCATGTCGCAGGAGCGCT 5294812
Query 29957 GGTAGAGCTGACA 29969
|||||||||| ||
Sbjct 5294811 GGTAGAGCTGGCA 5294799
Score = 105 bits (116), Expect = 5e-18
Identities = 191/274 (70%), Gaps = 8/274 (3%)
Strand=Plus/Minus
Query 30114 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 30173
|||||| || || ||| |||| ||||| | | || || |||||| || || ||
Sbjct 5294567 CAGCTGGTCGACGCCCTGACCCGTATAGTCCGTCTTCGCATCGACGTACTCGGCGCCAAA 5294508
Query 30174 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30233
|||| |||||||||||||||||| || |||||||| ||| | ||||||||| || |||
Sbjct 5294507 GTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCACCTCCCTGTGCGAGAGGCC 5294448
Query 30234 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA--CCCCCTTCTCG 30291
| |||||| || || | || |||||| |||||||||| | ||| | || |
Sbjct 5294447 CACGCTGTCCAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATGCGCACGCCCGCGTCGCT 5294388
Query 30292 GAGAGC--TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30349
||| || | | || | ||| |||| || |||||| || ||||| | | |||||
Sbjct 5294387 GAGGGCGAGCGACGACGTGT-TGG--CCTC-GATGAACCAGAGGAGCTCGGCGAGGACGG 5294332
Query 30350 CCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
| ||||| | ||| ||||||||||||||
Sbjct 5294331 CGCGGGTGAAGACGCGCTTCGTCGTGAGGAGGGG 5294298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617241438056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |