Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq4 304 2e-77
seq1 170 4e-37
>seq4
Length=5284358
Score = 304 bits (336), Expect = 2e-77
Identities = 964/1466 (66%), Gaps = 49/1466 (3%)
Strand=Plus/Plus
Query 221411 GACTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCC 221470
|||| || ||||| ||||||||||| ||||| |||||| |||||| | |||
Sbjct 2049454 GACTCGGTGAGGGCGGCGTGGTAGATAGTCTCGAAGATCTGCTTGTTCAACTGGCGGGCT 2049513
Query 221471 TCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCG 221530
||||| || ||| |||| || || | | || | ||||| || ||||| || ||
Sbjct 2049514 TCGGGTGACTCGAAAGGCAGGCGAAGAGCCAGGAAAGCATCGGCAAGACCCTGGACACCC 2049573
Query 221531 ATACCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGT 221588
| ||||||||| | ||| | | ||||| | || | || ||| |||||| || ||
Sbjct 2049574 AGACCGATGGGTCGGTGGCGCATGTTGCTGTTACGAGC-CTCCTG-CACGGGGTAGTGGT 2049631
Query 221589 TGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCT 221648
|||||||||| | ||||| ||||| || | ||| | || ||| |||||||
Sbjct 2049632 TGACGTCGATGATCTTGTTTAGGTTGCGAACAACGACCTGGGTGACGTCGTGAAGCTTCT 2049691
Query 221649 GGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAA 221708
|| | | | || ||| |||| | | || ||| | || || || |
Sbjct 2049692 GGAAGTCGTA---------GCAGCCCTCGTTGTAG---TCAACATAGGCAGGCAGAGCCA 2049739
Query 221709 CGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTAC 221768
||| ||||| || ||||| ||||| || | || |||| ||||||||||| |
Sbjct 2049740 GAGAGGCAAGGTTGCAGACGGCGACCTCATCAGGGGCGGAGTACTCAATGATCTCTGTGC 2049799
Query 221769 AGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGT 221828
|||||||| || ||||||||| |||| || || || |||||| ||| || |
Sbjct 2049800 AGAGGTTGGAGCTGCGGATGGTCCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCAT 2049859
Query 221829 CCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGA 221888
||||||||||||| ||||| ||||||||| ||| ||| | || || || |||||
Sbjct 2049860 CCTTGTAGAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAGGATGGAGTACCAGA 2049919
Query 221889 GTTCTCTGG-CGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATA 221946
| | ||||| ||| | |||| | ||| || ||||||| || | | | || || |
Sbjct 2049920 GCT-TCTGGGCGCGGATCGTCTTGC-GACCGCGACCCTCGCGCTCGTACTTCTCG-TACA 2049976
Query 221947 GAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACAT 222006
|||| | | |||| |||||||| ||| | ||||| || ||| | || |||||
Sbjct 2049977 GAGCCT--CGAACTCCTCACCGTAGCAGTCGGCAAGGCCAGGGCACTCGTTAGGGCACAT 2050034
Query 222007 CAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066
|| |||| | ||| | | || | || ||||||||| || |||||||| || ||
Sbjct 2050035 GAGGGTCCACTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCGGGGATCCAGAGGGC 2050094
Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAA 222126
| ||||| || | | ||| ||||||| |||| ||| || | || || | ||
Sbjct 2050095 GAGGAAGAGGTCACGAGCGCGCACCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAA 2050154
Query 222127 CTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTT 222186
||| || | || | |||||| ||||| || |||| ||| | || || || ||||||||
Sbjct 2050155 CTCGAAGACATCCGAGTGCCAAGGCTCTAGGTAGATGGCAAAGGCACCAGGACGCTTGTT 2050214
Query 222187 GCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTC 222245
||||||||| ||||| || ||| | |||||| | || || | || | | |
Sbjct 2050215 GCCACCCTGGTCCACGTATCT-GGCAGTGTTGTTGAACACTCGGAGCATGGGGATGATAC 2050273
Query 222246 CGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGG- 222302
||||||| |||||||||||| |||||| | || ||| | || | | |||
Sbjct 2050274 CGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCCGTGGCAC---GGATGCGGTGGA 2050330
Query 222303 CAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362
| || || ||||| || || || ||||||||||||||| ||||||| |||||
Sbjct 2050331 CGTTCAGACCAATACCGCCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGT 2050390
Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422
||||||||| || ||| ||||| | || || || || || ||||||| ||||| |
Sbjct 2050391 AGATGCCCTCAATGCTGTCATCCTTCATGTCCACAAGGAAGCACGACGACAGCTGAGCCT 2050450
Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482
| | || ||||| || || |||||| |||||| || ||| | || ||||| |
Sbjct 2050451 GCGGCGTACCAGCGTTGAAGAGTGTGGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGA 2050510
Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTC 222541
| | ||| ||||| | ||| | | |||||||| ||| || | | | ||| | |
Sbjct 2050511 GGTTGTAGGTCTCGATGACACGCTCAATGTTGTCGCCCCAGATACCG-ACGGCAACACGC 2050569
Query 222542 ATGTACATGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGAT 222598
||| ||||| ||| || | ||| || | | || | ||||| ||||||||| ||
Sbjct 2050570 ATGATCATGTGCTGCGGACGCTCGAC-GATCTTACCGTTGAGCT--TGAGCAGGTATGAA 2050626
Query 222599 TTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCG 222658
|| || |||||||| || ||||| | | || ||||| | | | | || | |||
Sbjct 2050627 CGCTCGAGCGTCTTGAATCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACAATGGCT 2050686
Query 222659 GCGTCCAGCTCCGACTTGT---GCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGG 222715
| ||| ||||| ||||| || | |||| ||||| | | ||| | | |
Sbjct 2050687 GAGTCGAGCTCTTCCTTGTGACGCATCACGC---ACTCGTATGTCTCCGTAGAGATCATG 2050743
Query 222716 GGAGCGTTCTCTTTGGTGTC-GGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGA 222774
|| | | | | | || || |||||| |||| ||||||||| | | | | | |||
Sbjct 2050744 GGCGAG-GGTGTGTTGTTTCGGGGGTTGACGTAGTGGTACAGGTCGCTGACGACGGAAGA 2050802
Query 222775 GAAC-GTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATAC 222833
|| | || | |||||||||||||| || || || ||||| || | || | |||
Sbjct 2050803 CCACTGCTTCTTG-GTCTGCTTGTGCAGGTTGGAGACTGCGATACGGGCAGCGAGGATGG 2050861
Query 222834 CATAGTCAGGGTGCACGGTGGTCATG 222859
| ||||| ||||| | |||||||
Sbjct 2050862 CGTAGTCGGGGTGGGTGACGGTCATG 2050887
Score = 95.1 bits (104), Expect = 2e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| || || | || || | | |||||| | ||| || ||| | ||
Sbjct 2049168 GTTGACGACCTGGAACTCGCCAGCCAGGACACGACGCTGGTAGATGTTGGAGGTGTAGGG 2049227
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || |||||||||||| || ||||| | |||||||| ||||||||||| || ||
Sbjct 2049228 CTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAC 2049287
Query 221236 CAGCAGACTGTTGCG 221250
|||||| ||||||
Sbjct 2049288 GAGCAGAGAGTTGCG 2049302
>seq1
Length=7437554
Score = 170 bits (188), Expect = 4e-37
Identities = 316/463 (68%), Gaps = 15/463 (3%)
Strand=Plus/Minus
Query 25865 CTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTT 25924
|||| || | | |||| || || ||||| |||||||| ||||| ||||| |||||||||
Sbjct 4690890 CTACCTTCGCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTG 4690831
Query 25925 CGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCA 25984
| ||||| | ||||||||||| ||| || || ||||||||| ||| ||| ||||
Sbjct 4690830 CCTTTGCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCA 4690771
Query 25985 ACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGG 26044
||||||| ||| | ||||||||||| |||| || |||||||||||||| || |
Sbjct 4690770 ACGAGCTGATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCCTGCTGCACTC-- 4690713
Query 26045 GCCACTTGCTCCACAAACCTTCTCAAGAGACCGT-CTACAG--TATCATCAAAGAGGCTG 26101
|||| || ||| | | | ||| || | || ||||||| || ||||
Sbjct 4690712 -CCACATGAAGCAC---CGCGCCGACAAGAAGGTGATTGAGGAGATCATCACCGACGCTG 4690657
Query 26102 TGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACA 26161
| ||||||| ||||||| | | |||||||||
Sbjct 4690656 TCAGGATCGAGCAGGAGTTCCTTACCGAGGCTCTTCCCTGCGCCCTGCTCGGCATGAACG 4690597
Query 26162 ACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GT-GCCAGCTGGG 26219
|| ||||||| || |||||||||| || ||||||| ||| || || ||| || ||
Sbjct 4690596 CCAACCTCATGAAGCAGTACATTGAGTTCGTCGCCGACCGTCTCCTCGTCGCC--CTTGG 4690539
Query 26220 ACTCGCCAGACTCTAC-AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGG 26278
|| | ||||| ||| | || ||||| |||||||| ||||| ||||| || |||
Sbjct 4690538 CAACGAGAAGATCTACAAGTCCTCC-AACCCCTTCGACTTCATGGAGAACATCTCCCTGG 4690480
Query 26279 AAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321
|| |||||||||||||| || ||| | |||| |||||| ||
Sbjct 4690479 GTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCA 4690437
Score = 89.7 bits (98), Expect = 1e-12
Identities = 163/234 (70%), Gaps = 5/234 (2%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | ||| ||||||||||| |||||||||||
Sbjct 4691335 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTTTGGACCGCCGAGGAGATTGATCTC 4691276
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTC-TATC--CAAAGACGAGCAGCATTTTCTCAAG 25593
||||||| | ||| |||| || || ||| | | || ||| || | || ||
Sbjct 4691275 TCCAAGGATCTCCACGACTGGAACAATCGCATCAACGACGATGAGAAGTACTTCATCTCT 4691216
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|| | | || ||||| || ||||| || || || || |||||||| || ||| |
Sbjct 4691215 CACATCCTCGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTCGTTGAGCGC 4691156
Query 25654 TTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|||| | | || || ||| | | | |||||| || |||||||| ||||||||
Sbjct 4691155 TTCAGCGGCGAGGTCCAGATTCCT-GAGGCCCGCTGCTTCTACGGCTTCCAGAT 4691103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843964039680
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