Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4 304 2e-77 seq1 170 4e-37 >seq4 Length=5284358 Score = 304 bits (336), Expect = 2e-77 Identities = 964/1466 (66%), Gaps = 49/1466 (3%) Strand=Plus/Plus Query 221411 GACTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCC 221470 |||| || ||||| ||||||||||| ||||| |||||| |||||| | ||| Sbjct 2049454 GACTCGGTGAGGGCGGCGTGGTAGATAGTCTCGAAGATCTGCTTGTTCAACTGGCGGGCT 2049513 Query 221471 TCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCG 221530 ||||| || ||| |||| || || | | || | ||||| || ||||| || || Sbjct 2049514 TCGGGTGACTCGAAAGGCAGGCGAAGAGCCAGGAAAGCATCGGCAAGACCCTGGACACCC 2049573 Query 221531 ATACCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGT 221588 | ||||||||| | ||| | | ||||| | || | || ||| |||||| || || Sbjct 2049574 AGACCGATGGGTCGGTGGCGCATGTTGCTGTTACGAGC-CTCCTG-CACGGGGTAGTGGT 2049631 Query 221589 TGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCT 221648 |||||||||| | ||||| ||||| || | ||| | || ||| ||||||| Sbjct 2049632 TGACGTCGATGATCTTGTTTAGGTTGCGAACAACGACCTGGGTGACGTCGTGAAGCTTCT 2049691 Query 221649 GGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAA 221708 || | | | || ||| |||| | | || ||| | || || || | Sbjct 2049692 GGAAGTCGTA---------GCAGCCCTCGTTGTAG---TCAACATAGGCAGGCAGAGCCA 2049739 Query 221709 CGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTAC 221768 ||| ||||| || ||||| ||||| || | || |||| ||||||||||| | Sbjct 2049740 GAGAGGCAAGGTTGCAGACGGCGACCTCATCAGGGGCGGAGTACTCAATGATCTCTGTGC 2049799 Query 221769 AGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGT 221828 |||||||| || ||||||||| |||| || || || |||||| ||| || | Sbjct 2049800 AGAGGTTGGAGCTGCGGATGGTCCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCAT 2049859 Query 221829 CCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGA 221888 ||||||||||||| ||||| ||||||||| ||| ||| | || || || ||||| Sbjct 2049860 CCTTGTAGAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAGGATGGAGTACCAGA 2049919 Query 221889 GTTCTCTGG-CGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATA 221946 | | ||||| ||| | |||| | ||| || ||||||| || | | | || || | Sbjct 2049920 GCT-TCTGGGCGCGGATCGTCTTGC-GACCGCGACCCTCGCGCTCGTACTTCTCG-TACA 2049976 Query 221947 GAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACAT 222006 |||| | | |||| |||||||| ||| | ||||| || ||| | || ||||| Sbjct 2049977 GAGCCT--CGAACTCCTCACCGTAGCAGTCGGCAAGGCCAGGGCACTCGTTAGGGCACAT 2050034 Query 222007 CAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066 || |||| | ||| | | || | || ||||||||| || |||||||| || || Sbjct 2050035 GAGGGTCCACTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCGGGGATCCAGAGGGC 2050094 Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAA 222126 | ||||| || | | ||| ||||||| |||| ||| || | || || | || Sbjct 2050095 GAGGAAGAGGTCACGAGCGCGCACCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAA 2050154 Query 222127 CTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTT 222186 ||| || | || | |||||| ||||| || |||| ||| | || || || |||||||| Sbjct 2050155 CTCGAAGACATCCGAGTGCCAAGGCTCTAGGTAGATGGCAAAGGCACCAGGACGCTTGTT 2050214 Query 222187 GCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTC 222245 ||||||||| ||||| || ||| | |||||| | || || | || | | | Sbjct 2050215 GCCACCCTGGTCCACGTATCT-GGCAGTGTTGTTGAACACTCGGAGCATGGGGATGATAC 2050273 Query 222246 CGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGG- 222302 ||||||| |||||||||||| |||||| | || ||| | || | | ||| Sbjct 2050274 CGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCCGTGGCAC---GGATGCGGTGGA 2050330 Query 222303 CAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362 | || || ||||| || || || ||||||||||||||| ||||||| ||||| Sbjct 2050331 CGTTCAGACCAATACCGCCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGT 2050390 Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422 ||||||||| || ||| ||||| | || || || || || ||||||| ||||| | Sbjct 2050391 AGATGCCCTCAATGCTGTCATCCTTCATGTCCACAAGGAAGCACGACGACAGCTGAGCCT 2050450 Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482 | | || ||||| || || |||||| |||||| || ||| | || ||||| | Sbjct 2050451 GCGGCGTACCAGCGTTGAAGAGTGTGGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGA 2050510 Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTC 222541 | | ||| ||||| | ||| | | |||||||| ||| || | | | ||| | | Sbjct 2050511 GGTTGTAGGTCTCGATGACACGCTCAATGTTGTCGCCCCAGATACCG-ACGGCAACACGC 2050569 Query 222542 ATGTACATGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGAT 222598 ||| ||||| ||| || | ||| || | | || | ||||| ||||||||| || Sbjct 2050570 ATGATCATGTGCTGCGGACGCTCGAC-GATCTTACCGTTGAGCT--TGAGCAGGTATGAA 2050626 Query 222599 TTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCG 222658 || || |||||||| || ||||| | | || ||||| | | | | || | ||| Sbjct 2050627 CGCTCGAGCGTCTTGAATCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACAATGGCT 2050686 Query 222659 GCGTCCAGCTCCGACTTGT---GCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGG 222715 | ||| ||||| ||||| || | |||| ||||| | | ||| | | | Sbjct 2050687 GAGTCGAGCTCTTCCTTGTGACGCATCACGC---ACTCGTATGTCTCCGTAGAGATCATG 2050743 Query 222716 GGAGCGTTCTCTTTGGTGTC-GGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGA 222774 || | | | | | || || |||||| |||| ||||||||| | | | | | ||| Sbjct 2050744 GGCGAG-GGTGTGTTGTTTCGGGGGTTGACGTAGTGGTACAGGTCGCTGACGACGGAAGA 2050802 Query 222775 GAAC-GTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATAC 222833 || | || | |||||||||||||| || || || ||||| || | || | ||| Sbjct 2050803 CCACTGCTTCTTG-GTCTGCTTGTGCAGGTTGGAGACTGCGATACGGGCAGCGAGGATGG 2050861 Query 222834 CATAGTCAGGGTGCACGGTGGTCATG 222859 | ||||| ||||| | ||||||| Sbjct 2050862 CGTAGTCGGGGTGGGTGACGGTCATG 2050887 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | || || | | |||||| | ||| || ||| | || Sbjct 2049168 GTTGACGACCTGGAACTCGCCAGCCAGGACACGACGCTGGTAGATGTTGGAGGTGTAGGG 2049227 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || |||||||||||| || ||||| | |||||||| ||||||||||| || || Sbjct 2049228 CTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAC 2049287 Query 221236 CAGCAGACTGTTGCG 221250 |||||| |||||| Sbjct 2049288 GAGCAGAGAGTTGCG 2049302 >seq1 Length=7437554 Score = 170 bits (188), Expect = 4e-37 Identities = 316/463 (68%), Gaps = 15/463 (3%) Strand=Plus/Minus Query 25865 CTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTT 25924 |||| || | | |||| || || ||||| |||||||| ||||| ||||| ||||||||| Sbjct 4690890 CTACCTTCGCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTG 4690831 Query 25925 CGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCA 25984 | ||||| | ||||||||||| ||| || || ||||||||| ||| ||| |||| Sbjct 4690830 CCTTTGCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCA 4690771 Query 25985 ACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGG 26044 ||||||| ||| | ||||||||||| |||| || |||||||||||||| || | Sbjct 4690770 ACGAGCTGATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCCTGCTGCACTC-- 4690713 Query 26045 GCCACTTGCTCCACAAACCTTCTCAAGAGACCGT-CTACAG--TATCATCAAAGAGGCTG 26101 |||| || ||| | | | ||| || | || ||||||| || |||| Sbjct 4690712 -CCACATGAAGCAC---CGCGCCGACAAGAAGGTGATTGAGGAGATCATCACCGACGCTG 4690657 Query 26102 TGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACA 26161 | ||||||| ||||||| | | ||||||||| Sbjct 4690656 TCAGGATCGAGCAGGAGTTCCTTACCGAGGCTCTTCCCTGCGCCCTGCTCGGCATGAACG 4690597 Query 26162 ACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GT-GCCAGCTGGG 26219 || ||||||| || |||||||||| || ||||||| ||| || || ||| || || Sbjct 4690596 CCAACCTCATGAAGCAGTACATTGAGTTCGTCGCCGACCGTCTCCTCGTCGCC--CTTGG 4690539 Query 26220 ACTCGCCAGACTCTAC-AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGG 26278 || | ||||| ||| | || ||||| |||||||| ||||| ||||| || ||| Sbjct 4690538 CAACGAGAAGATCTACAAGTCCTCC-AACCCCTTCGACTTCATGGAGAACATCTCCCTGG 4690480 Query 26279 AAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 || |||||||||||||| || ||| | |||| |||||| || Sbjct 4690479 GTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCA 4690437 Score = 89.7 bits (98), Expect = 1e-12 Identities = 163/234 (70%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | ||| ||||||||||| ||||||||||| Sbjct 4691335 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTTTGGACCGCCGAGGAGATTGATCTC 4691276 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTC-TATC--CAAAGACGAGCAGCATTTTCTCAAG 25593 ||||||| | ||| |||| || || ||| | | || ||| || | || || Sbjct 4691275 TCCAAGGATCTCCACGACTGGAACAATCGCATCAACGACGATGAGAAGTACTTCATCTCT 4691216 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || ||||| || ||||| || || || || |||||||| || ||| | Sbjct 4691215 CACATCCTCGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTCGTTGAGCGC 4691156 Query 25654 TTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | | || || ||| | | | |||||| || |||||||| |||||||| Sbjct 4691155 TTCAGCGGCGAGGTCCAGATTCCT-GAGGCCCGCTGCTTCTACGGCTTCCAGAT 4691103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843964039680