Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq1 452 5e-122
seq4 172 7e-38
seq3 172 7e-38
seq2 141 1e-28
>seq1
Length=7437554
Score = 452 bits (500), Expect = 5e-122
Identities = 1064/1600 (67%), Gaps = 16/1600 (1%)
Strand=Plus/Plus
Query 195286 CATAATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATG 195345
|| |||| ||| || | ||||||||| | || || || ||||| || || ||| | |
Sbjct 1690497 CACAATGGCTCCCGCCGTCGGTATCGATCTGGGTACCACGTACTCCTGCGTGGGTATCTT 1690556
Query 195346 GCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTA 195405
| | |||||| || || ||| | || ||||| || ||||| || || || || |
Sbjct 1690557 CCGCGAGGATCGTTGCGACATCATCGCCAACGACCAGGGTAACCGCACCACCCCTTCCTT 1690616
Query 195406 CGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTAT 195465
||| ||||| || || | || |||||| | || |||||||| || || ||| || ||
Sbjct 1690617 CGTCGCCTTCACCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCAT 1690676
Query 195466 GAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAA 195525
|||||| | ||| || ||||| ||||| |||||||| || || |||||||| | ||
Sbjct 1690677 GAACCCGACCAACACCGTCTTCGACGCCAAGCGTCTCATCGGCCGCAAGTTCGCCGACGC 1690736
Query 195526 GAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTC--CCGGTGTGGCTGAT 195583
| ||||| | ||| || ||| ||| | | | ||| | || | | | |||
Sbjct 1690737 TGAGGTCCAGGCCGACATGAAGCACTTCCCCT-TCAAGATCATCGACAAGGGCGGC---- 1690791
Query 195584 AAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATT 195643
||||| || || | || || || | || ||| |||| || | ||||| || ||
Sbjct 1690792 AAGCCCATCATCCAGGTCGAGTTCAAGGGCGAGGAGAAGACCTTCACCCCCGAGGAGATC 1690851
Query 195644 TCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTG 195703
|| || ||||| | | |||||| ||||| || || || | | | ||| | || ||
Sbjct 1690852 TCCTCCATGGTCCTCACCAAGATGCGTGAGACCGCCGAGTCCTACCTCGGTGAGACCGTC 1690911
Query 195704 AAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAG 195763
| | || || || || || || || ||||||| || || || || ||||| || |||
Sbjct 1690912 CAGAACGCCGTCGTCACCGTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAAG 1690971
Query 195764 GACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCT 195823
||||| | | ||||| || || ||| || | || ||||| || || || || |||
Sbjct 1690972 GACGCCGGTCTCATTGCCGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACTGCCGCT 1691031
Query 195824 GCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGAT 195883
|| || || || ||||| |||||||| | || | || || || |||| || ||
Sbjct 1691032 GCCATCGCCTACGGTCTCGACAAGAAGATTGAGGGCGAGCGTAACGTCCTGATTTTCGAC 1691091
Query 195884 CTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTA 195943
|||||||||||||| || |||||||| || || | ||||| | ||||| ||||| ||
Sbjct 1691092 CTCGGTGGTGGTACCTTCGATGTCTCCCTCCTTACCATTGAGGAGGGTATCTTCGAGGTC 1691151
Query 195944 AAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT 196003
||| | || || ||||| |||||||| |||||||| || ||||| || || | |
Sbjct 1691152 AAGTCCACCGCCGGTGACACTCATCTGGGTGGTGAGGACTTCGACAACCGCCTCGTGTCT 1691211
Query 196004 CATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCT 196063
|| | | |||||||| || |||| ||||| ||| | | ||| || | ||
Sbjct 1691212 CACCTCGCAAATGAGTTCAAACGCAAGACCAAGAAGGATCTGACGACCAATGCTCGCGCC 1691271
Query 196064 CTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAA 196123
|| ||||| ||| | ||||| || || |||||||| |||||||| || || | |||||
Sbjct 1691272 CTGCGTCGTCTTCGCACTGCTTGCGAGCGTGCCAAGCGAACTCTGTCCTCCTCTGCTCAG 1691331
Query 196124 ACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGT 196183
|| | | |||||||| || | || || || || |||||||| || |||| ||||||
Sbjct 1691332 ACCTCGATCGAGATTGACTCTCTCTTCGAGGGTATCGACTTCTACACGTCTATCACCCGT 1691391
Query 196184 GCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAA 196243
|| ||||| || ||| | | || |||| | || | || || || |
Sbjct 1691392 GCTCGTTTCGAGGAGCTTTGCCAGGACCTGTTCCGTTCCACCATCCAGCCCGTCGACCGC 1691451
Query 196244 GTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGA 196303
|| || |||||| ||||| || ||| ||| | || || |||||||| || ||
Sbjct 1691452 GTCCTGTCTGACGCTAAGATCGACAAGAGCCTGGTCCACGAGATCGTCCTTGTCGGTGGC 1691511
Query 196304 TCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTA 196363
|| |||||||| || || || || | | | || |||||| || ||
Sbjct 1691512 TCCACCCGTATCCCCCGCATCCAGAAGCTCATCACCGACTACTTCAACGGCAAGGAGCCC 1691571
Query 196364 AACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATT 196423
||||| | |||||||| || || || || || || ||||| || || ||||| || ||
Sbjct 1691572 AACAAGAGCATCAACCCCGACGAGGCTGTCGCCTACGGTGCTGCTGTCCAGGCCGCCATC 1691631
Query 196424 CTCTCAGGT-----GTTGACAATAATAACGTCCAA-GATCTTCTGCTACTTGATGTTGCA 196477
|| || ||| || | | | | | || |||| || | ||||| || || || ||
Sbjct 1691632 CTGTCCGGTGACACGTCGTCGA-AGT--CGACCAACGAGATCCTGCTGCTCGACGTCGCT 1691688
Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537
|| | || || ||| | || || || ||||| | ||||| || | || | |||
Sbjct 1691689 CCGCTCTCGCTCGGTATCGAGACTGCTGGTGGCATGATGACCAAGCTCATCCCCCGCAAC 1691748
Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGT 196597
|| || || || || |||||| | || || || || | ||||| || || || |||
Sbjct 1691749 ACTACCATCCCCACCAAGAAGTCCGAGGTGTTCTCCACCTTCTCCGACAACCAGCCTGGT 1691808
Query 196598 GTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGA 196657
|| | ||| || || || || || || ||| || | ||||| ||| || | ||
Sbjct 1691809 GTGCTTATCCAGGTCTACGAGGGTGAGCGCCAGCGCACCAAGGACAACTCGCTCATGGGC 1691868
Query 196658 ACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGC 196717
| ||||| | || || ||||| |||| ||| | |||||||| ||||| | || |
Sbjct 1691869 AAGTTCGAGCTCACTGGCATTCCTCCTGCCCCCCGTGGTGTTCCTCAGATCGAGGTCACC 1691928
Query 196718 TTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAA 196777
||||| | || || || || || | |||||| | || | || |||| | |||||
Sbjct 1691929 TTCGACCTTGATGCCAACGGTATCATGAACGTCTCCGCCGTTGAGAAGGGCACCGGCAAG 1691988
Query 196778 TCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGT 196837
|| | |||||||| || ||||| |||||||| || || || |||||||| || ||
Sbjct 1691989 TCCAACAAGATTGTCATCACCAACGACAAGGGCCGCCTGTCCAAGGAGGAGATCGAGAAG 1692048
Query 196838 ATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877
||| | || || || ||||||| ||| || |||||||
Sbjct 1692049 ATGCTGGCTGACGCCGAGAAGTACAAGGAGGAGGACGAGG 1692088
>seq4
Length=5284358
Score = 172 bits (190), Expect = 7e-38
Identities = 178/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| || || ||||| || || || || ||||| || ||||| ||||
Sbjct 3189838 GTGGTATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTCGAGT 3189779
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || ||||| ||||| || | || ||||||||| || ||||| ||||| || ||||
Sbjct 3189778 CATCTGACACGATCGACAATGTGAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCG 3189719
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || || || ||||||||||| ||||| || || || || |||||| | || |
Sbjct 3189718 ACCAGCAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACT 3189659
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| |||| |||||||| || || || || || || | || || ||||||
Sbjct 3189658 ACAACATTCAGAAGGAGTCGACGCTGCATCTCGTGCTGCGTCTGCGTGGTGGT 3189606
Score = 170 bits (188), Expect = 3e-37
Identities = 177/232 (76%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| || || ||||| || || || ||||||||||| ||||| ||||
Sbjct 3189610 GTGGTATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTAGAGGTGGAGT 3189551
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
|| ||||| || || ||| | || ||||||||| || ||||| || ||||| || |
Sbjct 3189550 CGAGCGACACGATTGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTG 3189491
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || ||||| || |||||||| ||||| || ||||| || |||||| || |
Sbjct 3189490 ACCAGCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTCAGCGACT 3189431
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
| ||| | || ||||||||||| || || ||||| || | ||||| || ||
Sbjct 3189430 ATAACATCCAGAAGGAGTCTACCCTCCATCTTGTCCTTCGTCTTCGTGGCGG 3189379
Score = 159 bits (176), Expect = 5e-34
Identities = 157/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
||||| || || |||||||||||||| ||||| || || || ||||| ||| |||| |
Sbjct 3190321 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGATACTATCGACAACGTCAAGTCG 3190262
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
||||| || || ||||| ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct 3190261 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTCATTTTCGCTGGCAAG 3190202
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
|||||||| || || || || || | ||||||||| | || |||||||| || || |||
Sbjct 3190201 CAGCTTGAGGACGGCCGCACTCTTTCCGATTACAACATCCAGAAGGAGTCCACCCTCCAC 3190142
Query 172066 CTTGTTCTAAGGCTTCGGGGTGG 172088
||||| || | || || |||||
Sbjct 3190141 CTTGTCCTCCGTCTCCGCGGTGG 3190119
Score = 114 bits (126), Expect = 2e-20
Identities = 173/242 (71%), Gaps = 3/242 (1%)
Strand=Plus/Plus
Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805
||||| ||||| || |||||||| | | ||||| ||||| ||| || | || ||
Sbjct 3276505 CAACGTCAGGCCACCAAGGACGCCGGTATCATTGCCGGTCTCAACGTCCTCCGTATCGTC 3276564
Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865
|| || || || || || || || || || || |||||||||| | | | || | |
Sbjct 3276565 AACGAGCCCACCGCCGCCGCCATCGCCTACGGCCTGGACAAGACCGATGGTGA-GCGCCA 3276623
Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925
|| |||| ||| ||||| ||||||||||| || |||||||| || ||| || ||
Sbjct 3276624 GATC-ATTG-TCTACGATCTTGGTGGTGGTACCTTCGATGTCTCCCTGCTCTCCATCGAC 3276681
Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985
| ||| | ||||| || ||| || |||||||| || ||||| |||||||| ||||||
Sbjct 3276682 GAGGGTGTTTTCGAGGTCCTGGCCACCGCTGGTGACACCCATCTTGGTGGTGAGGATTTC 3276741
Query 195986 GA 195987
||
Sbjct 3276742 GA 3276743
>seq3
Length=5313354
Score = 172 bits (190), Expect = 7e-38
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || || || || ||||| || || || ||||||||||||||||| ||||| ||
Sbjct 4708143 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCTTCC 4708084
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| ||| |||| ||||||| || || ||||| ||||| || ||||| |||
Sbjct 4708083 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 4708024
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || || || || || || || ||||| || ||||| || |||||| | || ||||||
Sbjct 4708023 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 4707964
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091
| || |||||| || || ||||| || || | || || ||||||||
Sbjct 4707963 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTCCGCCTGCGTGGTGGTGC 4707914
>seq2
Length=5694997
Score = 141 bits (156), Expect = 1e-28
Identities = 357/540 (66%), Gaps = 7/540 (1%)
Strand=Plus/Minus
Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722
|||||||||||| ||| || | || || || | || | | || || | ||||
Sbjct 2555877 AGATGAAGGAGATTGCCGAGACCAAGATCGGCAAGAAGGTCGAGAAGGCCGTCATCACTG 2555818
Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782
| || || ||||||| || || || ||||| || |||||||||| ||| ||| | |
Sbjct 2555817 TTCCCGCCTACTTCAACGACAACCAGCGTCAGGCCACCAAGGACGCTGGTGCCATTTCCG 2555758
Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842
| || ||| || | || ||||| || || || || ||||| ||||| || || || |
Sbjct 2555757 GCCTGAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCTGCCATTGCCTACGGCCTTG 2555698
Query 195843 ACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899
| |||||| || | || | || | |||| ||||| ||||||||||| |
Sbjct 2555697 GCTCCAACAAGTCTGAGAAGGAGCGCCAGGTCCTTATCTACGATCTTGGTGGTGGTACTT 2555638
Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959
| |||||||| || || | || | |||||| | ||| || |||||||||||||| |
Sbjct 2555637 TCGATGTCTCCCTCCTTACCATCCAGGGTGGTGTTTTCACCGTCAAGGCTACTGCTGGCG 2555578
Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGT 196019
|||| || || |||||| | || ||||| | ||||| || | | || |
Sbjct 2555577 ATACCCACCTTGGTGGTCAGGACTTCGACACCAACCTTCTTGACCACTGCAAGAAGGACT 2555518
Query 196020 TCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGA 196079
||| || ||| ||||| ||||| || || || || | ||||| || |||| | |
Sbjct 2555517 TCCAGCGCAAGTCCAAGAAGGATATCTCCGGCGATGCTCGCGCTCTCCGAAGGCTCCGAA 2555458
Query 196080 CTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG--GCTCAAACAATGGTTGAGAT 196137
|||| || || |||||||| || || || || | || || || | | |||||||
Sbjct 2555457 CTGCTTGCGAGCGTGCCAAGCGTACCCTTTC--CAGCGGTGCCCAGGCTACCATTGAGAT 2555400
Query 196138 TGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGA 196197
|| || | ||||| || |||||| || || |||||||| ||||| || ||
Sbjct 2555399 CGACTCTCTCTTTGATGGCGAGGACTTCACCCTGACCATCACCCGTGCGCGTTTCGAGGA 2555340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657861807923840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |