Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 452 5e-122 seq4 172 7e-38 seq3 172 7e-38 seq2 141 1e-28 >seq1 Length=7437554 Score = 452 bits (500), Expect = 5e-122 Identities = 1064/1600 (67%), Gaps = 16/1600 (1%) Strand=Plus/Plus Query 195286 CATAATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATG 195345 || |||| ||| || | ||||||||| | || || || ||||| || || ||| | | Sbjct 1690497 CACAATGGCTCCCGCCGTCGGTATCGATCTGGGTACCACGTACTCCTGCGTGGGTATCTT 1690556 Query 195346 GCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTA 195405 | | |||||| || || ||| | || ||||| || ||||| || || || || | Sbjct 1690557 CCGCGAGGATCGTTGCGACATCATCGCCAACGACCAGGGTAACCGCACCACCCCTTCCTT 1690616 Query 195406 CGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTAT 195465 ||| ||||| || || | || |||||| | || |||||||| || || ||| || || Sbjct 1690617 CGTCGCCTTCACCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCAT 1690676 Query 195466 GAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAA 195525 |||||| | ||| || ||||| ||||| |||||||| || || |||||||| | || Sbjct 1690677 GAACCCGACCAACACCGTCTTCGACGCCAAGCGTCTCATCGGCCGCAAGTTCGCCGACGC 1690736 Query 195526 GAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTC--CCGGTGTGGCTGAT 195583 | ||||| | ||| || ||| ||| | | | ||| | || | | | ||| Sbjct 1690737 TGAGGTCCAGGCCGACATGAAGCACTTCCCCT-TCAAGATCATCGACAAGGGCGGC---- 1690791 Query 195584 AAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATT 195643 ||||| || || | || || || | || ||| |||| || | ||||| || || Sbjct 1690792 AAGCCCATCATCCAGGTCGAGTTCAAGGGCGAGGAGAAGACCTTCACCCCCGAGGAGATC 1690851 Query 195644 TCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTG 195703 || || ||||| | | |||||| ||||| || || || | | | ||| | || || Sbjct 1690852 TCCTCCATGGTCCTCACCAAGATGCGTGAGACCGCCGAGTCCTACCTCGGTGAGACCGTC 1690911 Query 195704 AAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAG 195763 | | || || || || || || || ||||||| || || || || ||||| || ||| Sbjct 1690912 CAGAACGCCGTCGTCACCGTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAAG 1690971 Query 195764 GACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCT 195823 ||||| | | ||||| || || ||| || | || ||||| || || || || ||| Sbjct 1690972 GACGCCGGTCTCATTGCCGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACTGCCGCT 1691031 Query 195824 GCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGAT 195883 || || || || ||||| |||||||| | || | || || || |||| || || Sbjct 1691032 GCCATCGCCTACGGTCTCGACAAGAAGATTGAGGGCGAGCGTAACGTCCTGATTTTCGAC 1691091 Query 195884 CTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTA 195943 |||||||||||||| || |||||||| || || | ||||| | ||||| ||||| || Sbjct 1691092 CTCGGTGGTGGTACCTTCGATGTCTCCCTCCTTACCATTGAGGAGGGTATCTTCGAGGTC 1691151 Query 195944 AAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT 196003 ||| | || || ||||| |||||||| |||||||| || ||||| || || | | Sbjct 1691152 AAGTCCACCGCCGGTGACACTCATCTGGGTGGTGAGGACTTCGACAACCGCCTCGTGTCT 1691211 Query 196004 CATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCT 196063 || | | |||||||| || |||| ||||| ||| | | ||| || | || Sbjct 1691212 CACCTCGCAAATGAGTTCAAACGCAAGACCAAGAAGGATCTGACGACCAATGCTCGCGCC 1691271 Query 196064 CTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAA 196123 || ||||| ||| | ||||| || || |||||||| |||||||| || || | ||||| Sbjct 1691272 CTGCGTCGTCTTCGCACTGCTTGCGAGCGTGCCAAGCGAACTCTGTCCTCCTCTGCTCAG 1691331 Query 196124 ACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGT 196183 || | | |||||||| || | || || || || |||||||| || |||| |||||| Sbjct 1691332 ACCTCGATCGAGATTGACTCTCTCTTCGAGGGTATCGACTTCTACACGTCTATCACCCGT 1691391 Query 196184 GCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAA 196243 || ||||| || ||| | | || |||| | || | || || || | Sbjct 1691392 GCTCGTTTCGAGGAGCTTTGCCAGGACCTGTTCCGTTCCACCATCCAGCCCGTCGACCGC 1691451 Query 196244 GTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGA 196303 || || |||||| ||||| || ||| ||| | || || |||||||| || || Sbjct 1691452 GTCCTGTCTGACGCTAAGATCGACAAGAGCCTGGTCCACGAGATCGTCCTTGTCGGTGGC 1691511 Query 196304 TCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTA 196363 || |||||||| || || || || | | | || |||||| || || Sbjct 1691512 TCCACCCGTATCCCCCGCATCCAGAAGCTCATCACCGACTACTTCAACGGCAAGGAGCCC 1691571 Query 196364 AACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATT 196423 ||||| | |||||||| || || || || || || ||||| || || ||||| || || Sbjct 1691572 AACAAGAGCATCAACCCCGACGAGGCTGTCGCCTACGGTGCTGCTGTCCAGGCCGCCATC 1691631 Query 196424 CTCTCAGGT-----GTTGACAATAATAACGTCCAA-GATCTTCTGCTACTTGATGTTGCA 196477 || || ||| || | | | | | || |||| || | ||||| || || || || Sbjct 1691632 CTGTCCGGTGACACGTCGTCGA-AGT--CGACCAACGAGATCCTGCTGCTCGACGTCGCT 1691688 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 || | || || ||| | || || || ||||| | ||||| || | || | ||| Sbjct 1691689 CCGCTCTCGCTCGGTATCGAGACTGCTGGTGGCATGATGACCAAGCTCATCCCCCGCAAC 1691748 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGT 196597 || || || || || |||||| | || || || || | ||||| || || || ||| Sbjct 1691749 ACTACCATCCCCACCAAGAAGTCCGAGGTGTTCTCCACCTTCTCCGACAACCAGCCTGGT 1691808 Query 196598 GTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGA 196657 || | ||| || || || || || || ||| || | ||||| ||| || | || Sbjct 1691809 GTGCTTATCCAGGTCTACGAGGGTGAGCGCCAGCGCACCAAGGACAACTCGCTCATGGGC 1691868 Query 196658 ACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGC 196717 | ||||| | || || ||||| |||| ||| | |||||||| ||||| | || | Sbjct 1691869 AAGTTCGAGCTCACTGGCATTCCTCCTGCCCCCCGTGGTGTTCCTCAGATCGAGGTCACC 1691928 Query 196718 TTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAA 196777 ||||| | || || || || || | |||||| | || | || |||| | ||||| Sbjct 1691929 TTCGACCTTGATGCCAACGGTATCATGAACGTCTCCGCCGTTGAGAAGGGCACCGGCAAG 1691988 Query 196778 TCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGT 196837 || | |||||||| || ||||| |||||||| || || || |||||||| || || Sbjct 1691989 TCCAACAAGATTGTCATCACCAACGACAAGGGCCGCCTGTCCAAGGAGGAGATCGAGAAG 1692048 Query 196838 ATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 ||| | || || || ||||||| ||| || ||||||| Sbjct 1692049 ATGCTGGCTGACGCCGAGAAGTACAAGGAGGAGGACGAGG 1692088 >seq4 Length=5284358 Score = 172 bits (190), Expect = 7e-38 Identities = 178/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || ||||| || || || || ||||| || ||||| |||| Sbjct 3189838 GTGGTATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTCGAGT 3189779 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| || | || ||||||||| || ||||| ||||| || |||| Sbjct 3189778 CATCTGACACGATCGACAATGTGAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCG 3189719 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || ||||||||||| ||||| || || || || |||||| | || | Sbjct 3189718 ACCAGCAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACT 3189659 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| |||||||| || || || || || || | || || |||||| Sbjct 3189658 ACAACATTCAGAAGGAGTCGACGCTGCATCTCGTGCTGCGTCTGCGTGGTGGT 3189606 Score = 170 bits (188), Expect = 3e-37 Identities = 177/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || ||||| || || || ||||||||||| ||||| |||| Sbjct 3189610 GTGGTATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTAGAGGTGGAGT 3189551 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 || ||||| || || ||| | || ||||||||| || ||||| || ||||| || | Sbjct 3189550 CGAGCGACACGATTGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTG 3189491 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || ||||| || |||||||| ||||| || ||||| || |||||| || | Sbjct 3189490 ACCAGCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTCAGCGACT 3189431 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | ||| | || ||||||||||| || || ||||| || | ||||| || || Sbjct 3189430 ATAACATCCAGAAGGAGTCTACCCTCCATCTTGTCCTTCGTCTTCGTGGCGG 3189379 Score = 159 bits (176), Expect = 5e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 ||||| || || |||||||||||||| ||||| || || || ||||| ||| |||| | Sbjct 3190321 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGATACTATCGACAACGTCAAGTCG 3190262 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || ||||| ||||| || ||||| ||||| || || ||||| ||||| || Sbjct 3190261 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTCATTTTCGCTGGCAAG 3190202 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| || || || || || | ||||||||| | || |||||||| || || ||| Sbjct 3190201 CAGCTTGAGGACGGCCGCACTCTTTCCGATTACAACATCCAGAAGGAGTCCACCCTCCAC 3190142 Query 172066 CTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| || | || || ||||| Sbjct 3190141 CTTGTCCTCCGTCTCCGCGGTGG 3190119 Score = 114 bits (126), Expect = 2e-20 Identities = 173/242 (71%), Gaps = 3/242 (1%) Strand=Plus/Plus Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805 ||||| ||||| || |||||||| | | ||||| ||||| ||| || | || || Sbjct 3276505 CAACGTCAGGCCACCAAGGACGCCGGTATCATTGCCGGTCTCAACGTCCTCCGTATCGTC 3276564 Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865 || || || || || || || || || || || |||||||||| | | | || | | Sbjct 3276565 AACGAGCCCACCGCCGCCGCCATCGCCTACGGCCTGGACAAGACCGATGGTGA-GCGCCA 3276623 Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 || |||| ||| ||||| ||||||||||| || |||||||| || ||| || || Sbjct 3276624 GATC-ATTG-TCTACGATCTTGGTGGTGGTACCTTCGATGTCTCCCTGCTCTCCATCGAC 3276681 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985 | ||| | ||||| || ||| || |||||||| || ||||| |||||||| |||||| Sbjct 3276682 GAGGGTGTTTTCGAGGTCCTGGCCACCGCTGGTGACACCCATCTTGGTGGTGAGGATTTC 3276741 Query 195986 GA 195987 || Sbjct 3276742 GA 3276743 >seq3 Length=5313354 Score = 172 bits (190), Expect = 7e-38 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||||| || || || ||||||||||||||||| ||||| || Sbjct 4708143 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCTTCC 4708084 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| ||||||| || || ||||| ||||| || ||||| ||| Sbjct 4708083 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 4708024 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || ||||| || |||||| | || |||||| Sbjct 4708023 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 4707964 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 | || |||||| || || ||||| || || | || || |||||||| Sbjct 4707963 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTCCGCCTGCGTGGTGGTGC 4707914 >seq2 Length=5694997 Score = 141 bits (156), Expect = 1e-28 Identities = 357/540 (66%), Gaps = 7/540 (1%) Strand=Plus/Minus Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 |||||||||||| ||| || | || || || | || | | || || | |||| Sbjct 2555877 AGATGAAGGAGATTGCCGAGACCAAGATCGGCAAGAAGGTCGAGAAGGCCGTCATCACTG 2555818 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || ||||| || |||||||||| ||| ||| | | Sbjct 2555817 TTCCCGCCTACTTCAACGACAACCAGCGTCAGGCCACCAAGGACGCTGGTGCCATTTCCG 2555758 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 | || ||| || | || ||||| || || || || ||||| ||||| || || || | Sbjct 2555757 GCCTGAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCTGCCATTGCCTACGGCCTTG 2555698 Query 195843 ACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 | |||||| || | || | || | |||| ||||| ||||||||||| | Sbjct 2555697 GCTCCAACAAGTCTGAGAAGGAGCGCCAGGTCCTTATCTACGATCTTGGTGGTGGTACTT 2555638 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 | |||||||| || || | || | |||||| | ||| || |||||||||||||| | Sbjct 2555637 TCGATGTCTCCCTCCTTACCATCCAGGGTGGTGTTTTCACCGTCAAGGCTACTGCTGGCG 2555578 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGT 196019 |||| || || |||||| | || ||||| | ||||| || | | || | Sbjct 2555577 ATACCCACCTTGGTGGTCAGGACTTCGACACCAACCTTCTTGACCACTGCAAGAAGGACT 2555518 Query 196020 TCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGA 196079 ||| || ||| ||||| ||||| || || || || | ||||| || |||| | | Sbjct 2555517 TCCAGCGCAAGTCCAAGAAGGATATCTCCGGCGATGCTCGCGCTCTCCGAAGGCTCCGAA 2555458 Query 196080 CTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG--GCTCAAACAATGGTTGAGAT 196137 |||| || || |||||||| || || || || | || || || | | ||||||| Sbjct 2555457 CTGCTTGCGAGCGTGCCAAGCGTACCCTTTC--CAGCGGTGCCCAGGCTACCATTGAGAT 2555400 Query 196138 TGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGA 196197 || || | ||||| || |||||| || || |||||||| ||||| || || Sbjct 2555399 CGACTCTCTCTTTGATGGCGAGGACTTCACCCTGACCATCACCCGTGCGCGTTTCGAGGA 2555340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861807923840