Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 1e-19
seq2 107 6e-18
>seq1
Length=7437554
Score = 113 bits (124), Expect = 1e-19
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 133451 AAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGT 133510
||||| | |||||||| || ||||||||||||||| | | || || |||
Sbjct 4690933 AAGAAGGCCGACTGGGCCATCCGCTGGATCCAGGACAAGGAGTCTACCTTCGCCCAGCGT 4690874
Query 133511 CTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTT 133570
|||||||| || |||| || ||||| || || ||||| ||||| || |||||| ||
Sbjct 4690873 CTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCTATCTTC 4690814
Query 133571 TGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGG 133630
||||| || |||||||| | | || || ||| || || ||||| || || || |
Sbjct 4690813 TGGCTGAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTGATCTCTCGT 4690754
Query 133631 GACGAGGCACTTCACACCGAATTTGCC 133657
||||||| ||||||||||| ||||||
Sbjct 4690753 GACGAGGGTCTTCACACCGACTTTGCC 4690727
Score = 84.2 bits (92), Expect = 6e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
||||| || ||||||||| ||||| || || || ||||||||||| ||||| | |
Sbjct 4906422 TGGGCAATGGTCATACGAGACGGAATGGCGTGAGGGTTGATGATGATATCGGGAGTGATA 4906481
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957
|| || ||||||||||||| ||| | | ||| || |||| ||| ||||| ||
Sbjct 4906482 CCTTCTCTGGTGAAGGGCATAT-CTTCTTGGCGATATGTGAGACCAACAGTACCCTTCTG 4906540
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||||||||| || || ||||||||
Sbjct 4906541 ACCGTGACGAGAAGCAAATTTGTCACCAAT 4906570
>seq2
Length=5694997
Score = 107 bits (118), Expect = 6e-18
Identities = 161/226 (71%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 302592 ACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACG 302651
||| ||||||||||||||||| | || || || || |||||||| ||||| | |
Sbjct 2386362 ACGGCGCTGAATATAACCAGTCTCGGCCGTCTTGACGGCGGTATCAATCAGACCTTCTCT 2386303
Query 302652 ACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTA-GCCCCCCAATAAAGGAGCTCT 302710
|||| |||| || |||||||| | || ||| |||| | || | | | | ||| |||
Sbjct 2386302 ACCAGCCATGGCGTGGAAGAAGAATTCCGTCGG-CGTAAGTCCACGGAGATACGAGTTCT 2386244
Query 302711 CAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGT 302770
| ||||||||||| || || || || | |||| |||||| || || || || || | ||
Sbjct 2386243 CGACGAAACCACGGGCTTCAGGAGAGTAGTCGTCCTTGGTGAAATGGGGGAGTGTTCGGT 2386184
Query 302771 TCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCC 302816
|| ||||| | || ||||| || || || || ||||||| ||
Sbjct 2386183 ACTTGAAGCCGAAGGGAATACGTTTGCCCTCCACCATCTGCTGGCC 2386138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816242248264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |