Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 113 1e-19 seq2 107 6e-18 >seq1 Length=7437554 Score = 113 bits (124), Expect = 1e-19 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 133451 AAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGT 133510 ||||| | |||||||| || ||||||||||||||| | | || || ||| Sbjct 4690933 AAGAAGGCCGACTGGGCCATCCGCTGGATCCAGGACAAGGAGTCTACCTTCGCCCAGCGT 4690874 Query 133511 CTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTT 133570 |||||||| || |||| || ||||| || || ||||| ||||| || |||||| || Sbjct 4690873 CTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCTATCTTC 4690814 Query 133571 TGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGG 133630 ||||| || |||||||| | | || || ||| || || ||||| || || || | Sbjct 4690813 TGGCTGAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTGATCTCTCGT 4690754 Query 133631 GACGAGGCACTTCACACCGAATTTGCC 133657 ||||||| ||||||||||| |||||| Sbjct 4690753 GACGAGGGTCTTCACACCGACTTTGCC 4690727 Score = 84.2 bits (92), Expect = 6e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||||| || ||||||||| ||||| || || || ||||||||||| ||||| | | Sbjct 4906422 TGGGCAATGGTCATACGAGACGGAATGGCGTGAGGGTTGATGATGATATCGGGAGTGATA 4906481 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957 || || ||||||||||||| ||| | | ||| || |||| ||| ||||| || Sbjct 4906482 CCTTCTCTGGTGAAGGGCATAT-CTTCTTGGCGATATGTGAGACCAACAGTACCCTTCTG 4906540 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||| || || |||||||| Sbjct 4906541 ACCGTGACGAGAAGCAAATTTGTCACCAAT 4906570 >seq2 Length=5694997 Score = 107 bits (118), Expect = 6e-18 Identities = 161/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 302592 ACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACG 302651 ||| ||||||||||||||||| | || || || || |||||||| ||||| | | Sbjct 2386362 ACGGCGCTGAATATAACCAGTCTCGGCCGTCTTGACGGCGGTATCAATCAGACCTTCTCT 2386303 Query 302652 ACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTA-GCCCCCCAATAAAGGAGCTCT 302710 |||| |||| || |||||||| | || ||| |||| | || | | | | ||| ||| Sbjct 2386302 ACCAGCCATGGCGTGGAAGAAGAATTCCGTCGG-CGTAAGTCCACGGAGATACGAGTTCT 2386244 Query 302711 CAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGT 302770 | ||||||||||| || || || || | |||| |||||| || || || || || | || Sbjct 2386243 CGACGAAACCACGGGCTTCAGGAGAGTAGTCGTCCTTGGTGAAATGGGGGAGTGTTCGGT 2386184 Query 302771 TCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCC 302816 || ||||| | || ||||| || || || || ||||||| || Sbjct 2386183 ACTTGAAGCCGAAGGGAATACGTTTGCCCTCCACCATCTGCTGGCC 2386138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816242248264