Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq4 176 6e-38
seq1 172 7e-37
seq8 138 1e-26
seq5 86.0 8e-11
seq2 86.0 8e-11
>seq4
Length=5284358
Score = 176 bits (194), Expect = 6e-38
Identities = 273/392 (70%), Gaps = 15/392 (4%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| ||||| | || |||| ||| || || ||||||||||| | || ||||||||
Sbjct 2050221 CTGGTCCACGTATCTGGCAGTGTTGTTGAACACTCGGAGCATGGGGATGATACCGTTGGA 2050280
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
||||||||||| || | ||||| ||| | ||| || | ||| || | ||
Sbjct 2050281 GGTACCGTTGGTGCCGGCAATGTAGGAGCCCGTGGCACGGATGCGGTGGACGTTCAGACC 2050340
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| ||||| ||| ||||||||| | ||||| ||||| |||||||||||||||||
Sbjct 2050341 AATACCGCCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATGCCCTC 2050400
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| ||| ||||||||||||| || ||||||||||| || | |||| ||| ||
Sbjct 2050401 AATGCTGTCATCCTTCATGTCCACAAGGAAGCACGACGACAGCTGAGCCTGCGGCGTACC 2050460
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
||||||||||| ||||| | || |||||| |||| | |||||| || ||||||
Sbjct 2050461 AGCGTTGAAGAGTGTGGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTTGTAGGT 2050520
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
||| || ||| || | || | | || || |||| ||| ||
Sbjct 2050521 CTCGATGACACGC------------TCAATGTTGTC---GCCCCAGATACCGACGGCAAC 2050565
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGA 1630456
||||||| ||||| ||| || ||||||||||
Sbjct 2050566 ACGCATGATCATGTGCTGCGGACGCTCGACGA 2050597
Score = 168 bits (186), Expect = 8e-36
Identities = 239/335 (71%), Gaps = 17/335 (5%)
Strand=Plus/Plus
Query 18164 CCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCG-GGCCAGGGCGCACTTTCC 18222
|||| ||||||||||||| ||| | | || ||||| || |||||| || | |
Sbjct 4486443 CCGAATCCGACATCCAGCCCCAGCTCAACCGCCGCCGCCCCCGGCCAGTCGGCCATCACG 4486502
Query 18223 ACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACG 18282
|| | |||| | ||| || | |||| |||||| |||||||| ||| ||||| | |||
Sbjct 4486503 ACCCTGCGCGATGAGAAGGACCAGGTCACCATCCACTCGGGCACCGAGGACGGCGTGACG 4486562
Query 18283 CTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCC 18342
|||||| ||||| | | | || ||||| |||||||||||| |||||| |
Sbjct 4486563 CTCGGCACGCCCTGCTGACC----GTCCCCAACGAGGACCAGCGGCCCCGCGACTACAGC 4486618
Query 18343 GACATGTGCAAGGTG---------CCGCGGCCCTCACACGCCGACTACACCTACATGGCC 18393
| || ||| | || ||||| ||||| |||||||||| |||||| | |
Sbjct 4486619 GGCA---GCACGATGGACCTCTACCCGCGTCCCTCCCACGCCGACTGGACCTACCTCGAG 4486675
Query 18394 AAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATG 18453
||||||||| ||||||| ||||||||||| |||||| |||||||| |||||| |
Sbjct 4486676 AAGTACGGCGTCAAGGCCTCGTCGGGCGGCGGCCGGAGCTCTGCCCGTGAGACCATTGCC 4486735
Query 18454 CGCGTCGCCGCCGGCGCGGTCGCCGAGAAATGGCT 18488
||||| |||| ||||| ||||| ||||| |||||
Sbjct 4486736 CGCGTGCCCGCGGGCGCCGTCGCAGAGAAGTGGCT 4486770
Score = 111 bits (122), Expect = 2e-18
Identities = 323/497 (65%), Gaps = 12/497 (2%)
Strand=Plus/Plus
Query 1628110 GGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTC--CGTGGGCGACGAAAACTGGA 1628167
||||| |||| || ||||||||| || || || | ||||| || ||| |
Sbjct 2049730 GGCAGAGCCAGAGAGGCAAGGTTGCAGACGGCGACCTCATCAGGGGCG--GAGTACTCAA 2049787
Query 1628168 CGATCTCGGTGCACAGGTTGGCCGACGTCG-TCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226
|||||| ||||| ||||||| | | | | || || ||||||| ||||||| | |
Sbjct 2049788 TGATCTCTGTGCAGAGGTTGGA-GCTGCGGATGGTCCCGAGGTTCTTCTGGTTGCTCTTG 2049846
Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACG 1628286
||||| ||| ||||||| ||||||| |||| ||| ||||| |||| ||| ||| |
Sbjct 2049847 CGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAGG 2049906
Query 1628287 ATGGCCGACCAGA---TCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNNNNN 1628343
|||| |||||| ||||| |||||| || | | || |||| ||||
Sbjct 2049907 ATGGAGTACCAGAGCTTCTGG-GCGCGGAT-CGTCT-TGCGACCGCGACCCTCGCGCTCG 2049963
Query 1628344 NNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCTCG 1628403
|| || || | |||||||| ||| ||||| || ||||
Sbjct 2049964 TACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCAAGGCCAGGGCACTCG 2050023
Query 1628404 GACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACAC 1628463
|| || | ||| | ||| ||||| || || | || ||| ||||| ||
Sbjct 2050024 TTAGGGCACATGAGGGTCCACTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCGGGG 2050083
Query 1628464 GTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTG 1628523
|||| || ||| |||||||| || || || ||||||||| ||||||||||| |
Sbjct 2050084 ATCCAGAGGGCGAGGAAGAGGTCACGAGCGCGCACCTCCTCCTTTCCGTGGTTCTTGCGG 2050143
Query 1628524 AGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCC 1628583
|||||||| | |||| | || | |||||| ||||| |||||| ||||||||| ||
Sbjct 2050144 AGGTCGAGGAACTCGAAGACATCCGAGTGCCAAGGCTCTAGGTAGATGGCAAAGGCACCA 2050203
Query 1628584 TTGCGCTTGCCGCCGCC 1628600
|||||| ||| ||
Sbjct 2050204 GGACGCTTGTTGCCACC 2050220
Score = 89.7 bits (98), Expect = 6e-12
Identities = 103/136 (76%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 1726693 GGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCC-ACGCTCCCGTCGGTGCCGTTCTTGA 1726751
||||||||||| | |||||| | || || |||| | | | |||||||||||||||||||
Sbjct 2479038 GGCGGCGGCGCCAATGGCGTC-AATGGCGACGCCGAGGTTGCCGTCGGTGCCGTTCTTGA 2479096
Query 1726752 AGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGC 1726811
|||||| || | | || | || || | ||| ||||||| |||| |||||| ||||
Sbjct 2479097 AGCCGACGGGGAAGGAGAGGCCGGAGGCGAGCTCACGGTGCAGCTGGGACTCGGTGGTGC 2479156
Query 1726812 GCGCGCCCACGGCGCC 1726827
| ||||| | ||| ||
Sbjct 2479157 GGGCGCCGATGGCACC 2479172
Score = 86.0 bits (94), Expect = 8e-11
Identities = 107/142 (75%), Gaps = 5/142 (4%)
Strand=Plus/Plus
Query 19056 GGCGGCACGGTGACGTG-CGTGTGTCGCAACGTGCCGG--CAGGCCTCGGCGAGCCGTGC 19112
|||||||| || || || ||| ||||||| || | ||||||||||| || |||
Sbjct 4487006 GGCGGCACCGTCACCTGGCGTCATCCGCAACGCCCCCCTTCGGGCCTCGGCGACCCCTGC 4487065
Query 19113 TTTGACAAGATCGAGGCC-GCGCTCGCCCACGCCATGCTGTCG-ATCCCGGCCACCAAGG 19170
|| |||||| |||||||| || |||| |||||||||||| | ||||| ||| |||||
Sbjct 4487066 TTCGACAAGCTCGAGGCCGGCCCTCGGCCACGCCATGCTCCAGCATCCCCGCCGTCAAGG 4487125
Query 19171 GATTCGAGATTGGCAGCGGGTT 19192
|||||||| ||| ||| ||
Sbjct 4487126 CCTTCGAGATCGGCTCCGGCTT 4487147
>seq1
Length=7437554
Score = 172 bits (190), Expect = 7e-37
Identities = 242/338 (72%), Gaps = 4/338 (1%)
Strand=Plus/Minus
Query 1573901 GCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGC 1573960
||| |||| |||||||| |||||| | ||| |||||||| | |||||| |
Sbjct 5309460 GCCGGGCATCGGCAAGACGACGAGCGTGCTGTGCCTGGCGCGGCAGATGCTGGGCGACTC 5309401
Query 1573961 CGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCG 1574020
| | ||||||||||| || |||||||| |||||||||||| |||||||||||||
Sbjct 5309400 GTACAAGGAGGCCGTGCTGGAGCTCAACGCCAGCGACGAGCGCGGCATCGACGTCGTGCG 5309341
Query 1574021 CAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGT 1574080
|| ||||||| | ||| |||| | || ||||| |||| || |||||| |
Sbjct 5309340 GAACCGCATCAAGGGCTTCGCGCAGAAGAAGGTCACGCTGCCCGCCGGGCGGCACAAGCT 5309281
Query 1574081 GATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCAC 1574140
||||||| |||||||| ||| || | ||||||| || |||||||| |||||| ||
Sbjct 5309280 CGTCATCCTGGACGAGGCGGACAGCATGACGTCGGGCGCGCAGCAGGCGCTGCGGCGGAC 5309221
Query 1574141 CATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGT 1574200
||||| | || | ||||||||||| ||||| | ||||||||| ||| | | |
Sbjct 5309220 GATGGAGATCTACTCGAACACGACGCGGTTTGCGTTCGCGTGCAACCAGTCCAACAAGAT 5309161
Query 1574201 CATCGAGGCCCTCCAAAGTC--GCTGCGCCATTCTGCG 1574236
||||||| | || | |||| | ||||| || |||||
Sbjct 5309160 CATCGAGCCGCTGC--AGTCGAGGTGCGCTATCCTGCG 5309125
Score = 138 bits (152), Expect = 1e-26
Identities = 177/244 (73%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| ||| | |||||| |||||| |||||||||||||| | || |||||
Sbjct 4690431 GCCTTCTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATG 4690490
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | ||||||| ||| ||| || || | ||
Sbjct 4690491 TTCTCCATGAAGTCGAAGGGGTTGGAGGACTTGTAGATCTTCTCGTTGCCAAGGGCGACG 4690550
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| || ||||||||||| ||||| |||||||| ||||||| ||||||||||||||
Sbjct 4690551 AGGAGACGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGC 4690610
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || || || | |||| | | ||||| | ||||||| ||| || ||| ||||
Sbjct 4690611 AGGGCGCAGGGAAGAGCCTCGGTAAGGAACTCCTGCTCGATCCTGACAGCGTCGGTGATG 4690670
Query 868931 ATCT 868934
||||
Sbjct 4690671 ATCT 4690674
Score = 122 bits (134), Expect = 1e-21
Identities = 179/251 (71%), Gaps = 3/251 (1%)
Strand=Plus/Plus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|||||||||||||| || ||||||||||||||| ||| | |||| | | |||
Sbjct 4691082 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGGAATCTGG 4691141
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
||||| |||| || | | ||||||||| ||||||||||| |||||||||
Sbjct 4691142 ACCTCGCCGCTGAAGCGCTCAACGAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAG 4691201
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCGA--CACCCAGTGG 869809
|| || |||| ||| ||| |||| ||| |||||| ||| |||| ||||| |
Sbjct 4691202 AAGGCGAGGATGTGAGAGATGAAGTACTTCTCATCGTCGTTGATGCGATTGTTCCAGTCG 4691261
Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869
| || | ||| || | ||||||||||||||| | |||||||||||||| |||
Sbjct 4691262 TGGAGATCCTTGGAGAGATCAATCTCCTCGGCGGTCCAAAAAGAGGCCTCGGCCTTCTTG 4691321
Query 869870 TACATCTCCCA 869880
||||||| |||
Sbjct 4691322 TACATCTGCCA 4691332
Score = 102 bits (112), Expect = 1e-15
Identities = 144/197 (73%), Gaps = 13/197 (7%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| ||| ||||| |||||| |||| ||||||||||||||||| |||||
Sbjct 4690745 ACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCCACGCTT 4690804
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGC-CCG-AGAAAAAGATGCCCTCGACGGCGGCA 869296
||| ||||| ||||| | | | || || ||| ||| ||||| ||||| || || ||
Sbjct 4690805 CTTCAGCCAGAAGATAGAG--GCAAAGGCACCGCTGAAGAAGATACCCTCAACAGCAGCG 4690862
Query 869297 AAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATC 869353
||| | | ||| |||| ||| ||||| || ||||||| | |||||| ||
Sbjct 4690863 AAGGCAACGAGACGCTGGGCGAAGGT----AG--ACTCCTTGTCCTGGATCCAGCGGATG 4690916
Query 869354 GCCCAGTCGGCCTTTTT 869370
|||||||||||||| ||
Sbjct 4690917 GCCCAGTCGGCCTTCTT 4690933
Score = 96.9 bits (106), Expect = 4e-14
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 1572461 TCGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGGACAACGTGGTCGGCGTCGGTGTGG 1572520
|||| || | |||||| ||||| | | ||| || ||||||| | |||| ||||
Sbjct 3915346 TCGAGGACGAGCTGGGCAATGCGGTCGCCCTCCTTGATCTCGTGGTCCGTCTCGGCGTGG 3915287
Query 1572521 TTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGACGCCTGCGCCGACG 1572580
|||||||||| || |||||||||||| |||||||||||||||||||| ||||| |
Sbjct 3915286 TTGAAGAGCAGCACCTTCACCTCGCCGCGGTAGTCGGCATCGATGACGCCCGCGCCCGTG 3915227
Query 1572581 TCGATG 1572586
||||||
Sbjct 3915226 TCGATG 3915221
>seq8
Length=3412499
Score = 138 bits (152), Expect = 1e-26
Identities = 96/109 (88%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||| |||||||||||||||||||||| |||||||| |||| |||||| | || ||||||
Sbjct 1643054 GCCTCCAACTACCTCGACATCAAGCCGCTGCTCGACGTTGGTTGCAAGACGGTCGCCAAC 1642995
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294
||||||||||||||||| || ||||||||||| ||||| || |||||||
Sbjct 1642994 ATGATCAAGGGCAAGTCCCCTGAGGAGATCCGTAAGACTTTCAACATCA 1642946
>seq5
Length=4483510
Score = 86.0 bits (94), Expect = 8e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 507735 CCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCAGTCCGAGACGG 507794
||||||||||||| || ||||| ||||||||||| || |||||||| ||| ||||| ||
Sbjct 1092254 CCTACAACGCCGATTTCGACGGAGACGAGATGAATCTACACGTGCCGCAGACCGAGGAGG 1092313
Query 507795 CGCGCGCCGAGG 507806
|||| |||||||
Sbjct 1092314 CGCGAGCCGAGG 1092325
>seq2
Length=5694997
Score = 86.0 bits (94), Expect = 8e-11
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 19095 GGCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCG 19154
||||| ||||||||||||||||||||| | ||||| | || ||||| || ||| ||||
Sbjct 3831661 GGCCTAGGCGAGCCGTGCTTTGACAAGCTTGAGGCTACCCTTGCCCATGCTATGATGTCT 3831720
Query 19155 ATCCCGGCCACCAAGGGATTCGAGATTGGC 19184
|| || || || ||||| || |||||||||
Sbjct 3831721 ATTCCTGCTACTAAGGGCTTTGAGATTGGC 3831750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107133291342824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |