Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq4 176 6e-38 seq1 172 7e-37 seq8 138 1e-26 seq5 86.0 8e-11 seq2 86.0 8e-11 >seq4 Length=5284358 Score = 176 bits (194), Expect = 6e-38 Identities = 273/392 (70%), Gaps = 15/392 (4%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| | || |||| ||| || || ||||||||||| | || |||||||| Sbjct 2050221 CTGGTCCACGTATCTGGCAGTGTTGTTGAACACTCGGAGCATGGGGATGATACCGTTGGA 2050280 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||||| || | ||||| ||| | ||| || | ||| || | || Sbjct 2050281 GGTACCGTTGGTGCCGGCAATGTAGGAGCCCGTGGCACGGATGCGGTGGACGTTCAGACC 2050340 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || ||||| ||| ||||||||| | ||||| ||||| ||||||||||||||||| Sbjct 2050341 AATACCGCCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATGCCCTC 2050400 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| ||||||||||||| || ||||||||||| || | |||| ||| || Sbjct 2050401 AATGCTGTCATCCTTCATGTCCACAAGGAAGCACGACGACAGCTGAGCCTGCGGCGTACC 2050460 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||||| ||||| | || |||||| |||| | |||||| || |||||| Sbjct 2050461 AGCGTTGAAGAGTGTGGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTTGTAGGT 2050520 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 ||| || ||| || | || | | || || |||| ||| || Sbjct 2050521 CTCGATGACACGC------------TCAATGTTGTC---GCCCCAGATACCGACGGCAAC 2050565 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGA 1630456 ||||||| ||||| ||| || |||||||||| Sbjct 2050566 ACGCATGATCATGTGCTGCGGACGCTCGACGA 2050597 Score = 168 bits (186), Expect = 8e-36 Identities = 239/335 (71%), Gaps = 17/335 (5%) Strand=Plus/Plus Query 18164 CCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCG-GGCCAGGGCGCACTTTCC 18222 |||| ||||||||||||| ||| | | || ||||| || |||||| || | | Sbjct 4486443 CCGAATCCGACATCCAGCCCCAGCTCAACCGCCGCCGCCCCCGGCCAGTCGGCCATCACG 4486502 Query 18223 ACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACG 18282 || | |||| | ||| || | |||| |||||| |||||||| ||| ||||| | ||| Sbjct 4486503 ACCCTGCGCGATGAGAAGGACCAGGTCACCATCCACTCGGGCACCGAGGACGGCGTGACG 4486562 Query 18283 CTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCC 18342 |||||| ||||| | | | || ||||| |||||||||||| |||||| | Sbjct 4486563 CTCGGCACGCCCTGCTGACC----GTCCCCAACGAGGACCAGCGGCCCCGCGACTACAGC 4486618 Query 18343 GACATGTGCAAGGTG---------CCGCGGCCCTCACACGCCGACTACACCTACATGGCC 18393 | || ||| | || ||||| ||||| |||||||||| |||||| | | Sbjct 4486619 GGCA---GCACGATGGACCTCTACCCGCGTCCCTCCCACGCCGACTGGACCTACCTCGAG 4486675 Query 18394 AAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATG 18453 ||||||||| ||||||| ||||||||||| |||||| |||||||| |||||| | Sbjct 4486676 AAGTACGGCGTCAAGGCCTCGTCGGGCGGCGGCCGGAGCTCTGCCCGTGAGACCATTGCC 4486735 Query 18454 CGCGTCGCCGCCGGCGCGGTCGCCGAGAAATGGCT 18488 ||||| |||| ||||| ||||| ||||| ||||| Sbjct 4486736 CGCGTGCCCGCGGGCGCCGTCGCAGAGAAGTGGCT 4486770 Score = 111 bits (122), Expect = 2e-18 Identities = 323/497 (65%), Gaps = 12/497 (2%) Strand=Plus/Plus Query 1628110 GGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTC--CGTGGGCGACGAAAACTGGA 1628167 ||||| |||| || ||||||||| || || || | ||||| || ||| | Sbjct 2049730 GGCAGAGCCAGAGAGGCAAGGTTGCAGACGGCGACCTCATCAGGGGCG--GAGTACTCAA 2049787 Query 1628168 CGATCTCGGTGCACAGGTTGGCCGACGTCG-TCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226 |||||| ||||| ||||||| | | | | || || ||||||| ||||||| | | Sbjct 2049788 TGATCTCTGTGCAGAGGTTGGA-GCTGCGGATGGTCCCGAGGTTCTTCTGGTTGCTCTTG 2049846 Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACG 1628286 ||||| ||| ||||||| ||||||| |||| ||| ||||| |||| ||| ||| | Sbjct 2049847 CGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAGG 2049906 Query 1628287 ATGGCCGACCAGA---TCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNNNNN 1628343 |||| |||||| ||||| |||||| || | | || |||| |||| Sbjct 2049907 ATGGAGTACCAGAGCTTCTGG-GCGCGGAT-CGTCT-TGCGACCGCGACCCTCGCGCTCG 2049963 Query 1628344 NNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCTCG 1628403 || || || | |||||||| ||| ||||| || |||| Sbjct 2049964 TACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCAAGGCCAGGGCACTCG 2050023 Query 1628404 GACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACAC 1628463 || || | ||| | ||| ||||| || || | || ||| ||||| || Sbjct 2050024 TTAGGGCACATGAGGGTCCACTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCGGGG 2050083 Query 1628464 GTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTG 1628523 |||| || ||| |||||||| || || || ||||||||| ||||||||||| | Sbjct 2050084 ATCCAGAGGGCGAGGAAGAGGTCACGAGCGCGCACCTCCTCCTTTCCGTGGTTCTTGCGG 2050143 Query 1628524 AGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCC 1628583 |||||||| | |||| | || | |||||| ||||| |||||| ||||||||| || Sbjct 2050144 AGGTCGAGGAACTCGAAGACATCCGAGTGCCAAGGCTCTAGGTAGATGGCAAAGGCACCA 2050203 Query 1628584 TTGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 2050204 GGACGCTTGTTGCCACC 2050220 Score = 89.7 bits (98), Expect = 6e-12 Identities = 103/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 1726693 GGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCC-ACGCTCCCGTCGGTGCCGTTCTTGA 1726751 ||||||||||| | |||||| | || || |||| | | | ||||||||||||||||||| Sbjct 2479038 GGCGGCGGCGCCAATGGCGTC-AATGGCGACGCCGAGGTTGCCGTCGGTGCCGTTCTTGA 2479096 Query 1726752 AGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGC 1726811 |||||| || | | || | || || | ||| ||||||| |||| |||||| |||| Sbjct 2479097 AGCCGACGGGGAAGGAGAGGCCGGAGGCGAGCTCACGGTGCAGCTGGGACTCGGTGGTGC 2479156 Query 1726812 GCGCGCCCACGGCGCC 1726827 | ||||| | ||| || Sbjct 2479157 GGGCGCCGATGGCACC 2479172 Score = 86.0 bits (94), Expect = 8e-11 Identities = 107/142 (75%), Gaps = 5/142 (4%) Strand=Plus/Plus Query 19056 GGCGGCACGGTGACGTG-CGTGTGTCGCAACGTGCCGG--CAGGCCTCGGCGAGCCGTGC 19112 |||||||| || || || ||| ||||||| || | ||||||||||| || ||| Sbjct 4487006 GGCGGCACCGTCACCTGGCGTCATCCGCAACGCCCCCCTTCGGGCCTCGGCGACCCCTGC 4487065 Query 19113 TTTGACAAGATCGAGGCC-GCGCTCGCCCACGCCATGCTGTCG-ATCCCGGCCACCAAGG 19170 || |||||| |||||||| || |||| |||||||||||| | ||||| ||| ||||| Sbjct 4487066 TTCGACAAGCTCGAGGCCGGCCCTCGGCCACGCCATGCTCCAGCATCCCCGCCGTCAAGG 4487125 Query 19171 GATTCGAGATTGGCAGCGGGTT 19192 |||||||| ||| ||| || Sbjct 4487126 CCTTCGAGATCGGCTCCGGCTT 4487147 >seq1 Length=7437554 Score = 172 bits (190), Expect = 7e-37 Identities = 242/338 (72%), Gaps = 4/338 (1%) Strand=Plus/Minus Query 1573901 GCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGC 1573960 ||| |||| |||||||| |||||| | ||| |||||||| | |||||| | Sbjct 5309460 GCCGGGCATCGGCAAGACGACGAGCGTGCTGTGCCTGGCGCGGCAGATGCTGGGCGACTC 5309401 Query 1573961 CGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCG 1574020 | | ||||||||||| || |||||||| |||||||||||| ||||||||||||| Sbjct 5309400 GTACAAGGAGGCCGTGCTGGAGCTCAACGCCAGCGACGAGCGCGGCATCGACGTCGTGCG 5309341 Query 1574021 CAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGT 1574080 || ||||||| | ||| |||| | || ||||| |||| || |||||| | Sbjct 5309340 GAACCGCATCAAGGGCTTCGCGCAGAAGAAGGTCACGCTGCCCGCCGGGCGGCACAAGCT 5309281 Query 1574081 GATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCAC 1574140 ||||||| |||||||| ||| || | ||||||| || |||||||| |||||| || Sbjct 5309280 CGTCATCCTGGACGAGGCGGACAGCATGACGTCGGGCGCGCAGCAGGCGCTGCGGCGGAC 5309221 Query 1574141 CATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGT 1574200 ||||| | || | ||||||||||| ||||| | ||||||||| ||| | | | Sbjct 5309220 GATGGAGATCTACTCGAACACGACGCGGTTTGCGTTCGCGTGCAACCAGTCCAACAAGAT 5309161 Query 1574201 CATCGAGGCCCTCCAAAGTC--GCTGCGCCATTCTGCG 1574236 ||||||| | || | |||| | ||||| || ||||| Sbjct 5309160 CATCGAGCCGCTGC--AGTCGAGGTGCGCTATCCTGCG 5309125 Score = 138 bits (152), Expect = 1e-26 Identities = 177/244 (73%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| ||| | |||||| |||||| |||||||||||||| | || ||||| Sbjct 4690431 GCCTTCTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATG 4690490 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | ||||||| ||| ||| || || | || Sbjct 4690491 TTCTCCATGAAGTCGAAGGGGTTGGAGGACTTGTAGATCTTCTCGTTGCCAAGGGCGACG 4690550 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || ||||||||||| ||||| |||||||| ||||||| |||||||||||||| Sbjct 4690551 AGGAGACGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGC 4690610 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | |||| | | ||||| | ||||||| ||| || ||| |||| Sbjct 4690611 AGGGCGCAGGGAAGAGCCTCGGTAAGGAACTCCTGCTCGATCCTGACAGCGTCGGTGATG 4690670 Query 868931 ATCT 868934 |||| Sbjct 4690671 ATCT 4690674 Score = 122 bits (134), Expect = 1e-21 Identities = 179/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| | |||| | | ||| Sbjct 4691082 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGGAATCTGG 4691141 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || | | ||||||||| ||||||||||| ||||||||| Sbjct 4691142 ACCTCGCCGCTGAAGCGCTCAACGAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAG 4691201 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCGA--CACCCAGTGG 869809 || || |||| ||| ||| |||| ||| |||||| ||| |||| ||||| | Sbjct 4691202 AAGGCGAGGATGTGAGAGATGAAGTACTTCTCATCGTCGTTGATGCGATTGTTCCAGTCG 4691261 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | || | ||| || | ||||||||||||||| | |||||||||||||| ||| Sbjct 4691262 TGGAGATCCTTGGAGAGATCAATCTCCTCGGCGGTCCAAAAAGAGGCCTCGGCCTTCTTG 4691321 Query 869870 TACATCTCCCA 869880 ||||||| ||| Sbjct 4691322 TACATCTGCCA 4691332 Score = 102 bits (112), Expect = 1e-15 Identities = 144/197 (73%), Gaps = 13/197 (7%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||||| |||||| |||| ||||||||||||||||| ||||| Sbjct 4690745 ACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCCACGCTT 4690804 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGC-CCG-AGAAAAAGATGCCCTCGACGGCGGCA 869296 ||| ||||| ||||| | | | || || ||| ||| ||||| ||||| || || || Sbjct 4690805 CTTCAGCCAGAAGATAGAG--GCAAAGGCACCGCTGAAGAAGATACCCTCAACAGCAGCG 4690862 Query 869297 AAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATC 869353 ||| | | ||| |||| ||| ||||| || ||||||| | |||||| || Sbjct 4690863 AAGGCAACGAGACGCTGGGCGAAGGT----AG--ACTCCTTGTCCTGGATCCAGCGGATG 4690916 Query 869354 GCCCAGTCGGCCTTTTT 869370 |||||||||||||| || Sbjct 4690917 GCCCAGTCGGCCTTCTT 4690933 Score = 96.9 bits (106), Expect = 4e-14 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 1572461 TCGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGGACAACGTGGTCGGCGTCGGTGTGG 1572520 |||| || | |||||| ||||| | | ||| || ||||||| | |||| |||| Sbjct 3915346 TCGAGGACGAGCTGGGCAATGCGGTCGCCCTCCTTGATCTCGTGGTCCGTCTCGGCGTGG 3915287 Query 1572521 TTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGACGCCTGCGCCGACG 1572580 |||||||||| || |||||||||||| |||||||||||||||||||| ||||| | Sbjct 3915286 TTGAAGAGCAGCACCTTCACCTCGCCGCGGTAGTCGGCATCGATGACGCCCGCGCCCGTG 3915227 Query 1572581 TCGATG 1572586 |||||| Sbjct 3915226 TCGATG 3915221 >seq8 Length=3412499 Score = 138 bits (152), Expect = 1e-26 Identities = 96/109 (88%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||| |||||||||||||||||||||| |||||||| |||| |||||| | || |||||| Sbjct 1643054 GCCTCCAACTACCTCGACATCAAGCCGCTGCTCGACGTTGGTTGCAAGACGGTCGCCAAC 1642995 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||||||||| || ||||||||||| ||||| || ||||||| Sbjct 1642994 ATGATCAAGGGCAAGTCCCCTGAGGAGATCCGTAAGACTTTCAACATCA 1642946 >seq5 Length=4483510 Score = 86.0 bits (94), Expect = 8e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 507735 CCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCAGTCCGAGACGG 507794 ||||||||||||| || ||||| ||||||||||| || |||||||| ||| ||||| || Sbjct 1092254 CCTACAACGCCGATTTCGACGGAGACGAGATGAATCTACACGTGCCGCAGACCGAGGAGG 1092313 Query 507795 CGCGCGCCGAGG 507806 |||| ||||||| Sbjct 1092314 CGCGAGCCGAGG 1092325 >seq2 Length=5694997 Score = 86.0 bits (94), Expect = 8e-11 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 19095 GGCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCG 19154 ||||| ||||||||||||||||||||| | ||||| | || ||||| || ||| |||| Sbjct 3831661 GGCCTAGGCGAGCCGTGCTTTGACAAGCTTGAGGCTACCCTTGCCCATGCTATGATGTCT 3831720 Query 19155 ATCCCGGCCACCAAGGGATTCGAGATTGGC 19184 || || || || ||||| || ||||||||| Sbjct 3831721 ATTCCTGCTACTAAGGGCTTTGAGATTGGC 3831750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107133291342824