Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq4 143 2e-29
>seq4
Length=5284358
Score = 143 bits (158), Expect = 2e-29
Identities = 823/1301 (63%), Gaps = 56/1301 (4%)
Strand=Plus/Plus
Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATTGTTGCAATATTTTGA 138417
|||||||||||||||||||| ||| | | || || || | | || || ||
Sbjct 2049025 ATCTCCCACACGGTCTTGTACAGAGCCTTGACATCATCAGGGATGTTGGGGATGTTCTGG 2049084
Query 138418 ATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTG 138477
||| ||||| | |||||||| | || ||||| |||| | ||| | || |
Sbjct 2049085 ATGGAGCCGTTCTCGGCAATGATCCTGTTCTTCATGCCATCAGACCAGAGACCAAGCTCG 2049144
Query 138478 ATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGA 138537
| | ||| || | ||| | ||| | |||||| || || || |||| || |||||
Sbjct 2049145 ACGAGGTCCTTGAGCAGCCAAGGGTTGACGACCTGGAACTCGCCAGCCAGGACACGACGC 2049204
Query 138538 ACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTG 138597
||| |||||| |||| | ||||| || | |||||||| || |||||||| | |||
Sbjct 2049205 TGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAAGTG 2049264
Query 138598 GTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGT 138657
| || || |||||| || || | ||||| || || | |||||| |||||| |
Sbjct 2049265 CTGGCAGTGGGCATGGGGGCAACGAGCAGAGAGTTGCGGATACCGTGCTCCTTGATCTGC 2049324
Query 138658 TCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGT 138717
|||||||| ||| ||||||| || || || | |||||| ||| ||||
Sbjct 2049325 TCCTTGAGGCTGTCCCACTCCCACAGGTCAGAGGGCTTGACATCCCACATGTCGAACTGC 2049384
Query 138718 AACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCC 138777
| || ||| || || ||| | | | | | ||| || ||| | ||
Sbjct 2049385 AGAATACCCTCGGAGGCAGGGGAGCCCTTGAAGGTAGAGTAGGGGCCCTGCTCCTTGGCA 2049444
Query 138778 AACTCGTTGCTCGCCTC---GAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTG 138834
| ||| ||| ||| ||| || | | ||| ||||| ||| ||||||| ||
Sbjct 2049445 AGCTC---CATCGACTCGGTGAGGGCGGCGTGGTAGATAGTCTCGAAGATCTGCTTGTTC 2049501
Query 138835 AGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGC 138894
| | ||||| |||| |||| | |||| ||| || | ||| || ||||| ||
Sbjct 2049502 AACTGGCGGGCTTCGGGTGACTCGAAAGGCAGGCGAAGAGCCAGGAAAGCATCGGCAAGA 2049561
Query 138895 CCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTC--- 138950
|| || || |||| |||| || || ||||||| || ||| || || || ||
Sbjct 2049562 CCCTGGACACCCAGACCGATGGGTCGGTGGCGCA----TGTTGCTGTTACGAGCCTCCTG 2049617
Query 138951 GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGT--C 139008
| || || | ||| || |||||||| ||||||| || || || || |||| || |
Sbjct 2049618 CACGGGGTAGTGGTTGACGTCGATGATCTTGTTTAGGTTGCGAACAACGACCTGGGTGAC 2049677
Query 139009 GTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAA 139067
|| | | || | | | || ||||| |||| |||||| || | || | | ||
Sbjct 2049678 GT---CGTGAAGCTTCTGGAAGTCGTAGCAGCCCTCGTTGTAGT---CAACATAGGCA-- 2049729
Query 139068 TTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTC 139127
| || || | ||||| | |||||| || || || || || ||| || ||| ||
Sbjct 2049730 --GGCAGAGCCAGA--GAGGCAAGGTTGCAGACGGCGACCTCATCAGGGGCGGAGTACTC 2049785
Query 139128 GACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTT 139187
| || || | || | || | ||| || || | || | || ||||| ||
Sbjct 2049786 AATGATCTCTGTGCAGAGGTTGGAGCTGCGGATGGTCCCGAGGTTCTTCTGGTTGCTCTT 2049845
Query 139188 TCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTAT 139247
||||| || ||||| ||||| ||||| | || ||||||| || || | ||| |
Sbjct 2049846 GCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAG 2049905
Query 139248 AATGAATTTGAACAAGTCCCTAGCTTGTAT----TTGACGCACGTAAAGTTCGTCGCGCT 139303
||| | | | | | | || | || ||| || || | | |||||||
Sbjct 2049906 GATGGAGTACCAGAGCTTCTGGGCGCGGATCGTCTTG-CGACCG---CGACCCTCGCGCT 2049961
Query 139304 CGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACT 139363
||||||| ||||| || | ||||| ||||||||| ||| | ||| | | ||||
Sbjct 2049962 CGTACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCAAGGCCAGGGCACT 2050021
Query 139364 TGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCG 139423
|| ||| |||||||| | ||| |||||||| || || ||| ||||||| ||||| |
Sbjct 2050022 CGTTAGGGCACATGAGGGTCCACTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCGG 2050081
Query 139424 GAATCCACAAAGC---GAACAG--CA-AATCGCGCGCCTTCTTATCTTCCGAACCCATGT 139477
| ||||| | || ||| || || | ||||| ||| || | ||||| ||
Sbjct 2050082 GGATCCAGAGGGCGAGGAAGAGGTCACGAGCGCGCACCTCCTCCT-TTCCG------TGG 2050134
Query 139478 TACGTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGC 139535
| | || | | || ||||| || || || || | |||||| || || || ||||||||
Sbjct 2050135 TTC-TTGCGGAGGTCGAGGAACTCGAAGACATCCGAGTGCCAAGGCTCTAGGTAGATGGC 2050193
Query 139536 CATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATAC 139592
| || || || |||||||| || || |||| || ||| || ||||| ||
Sbjct 2050194 AAAGGCACCAGGACGCTTGTTGCCACCCTGGTCCACGTATCTGGCAGTGTTGTTGAACAC 2050253
Query 139593 GCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGC 139633
|| | ||| || | |||| | | || ||||||||||
Sbjct 2050254 TCGGAGCATGGGGATGATACCGTTGGAGGTACCGTTGGTGC 2050294
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || ||||| || || ||||| || || || | |
Sbjct 3189833 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTCGAGTCATCT 3189774
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || || ||||| ||
Sbjct 3189773 GACACGATCGACAATGTGAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 3189714
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | |||||||| || || ||||| ||||| | | | | || || || |||
Sbjct 3189713 CAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAAC 3189654
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||| ||||| || || | ||| |||| |||| || ||
Sbjct 3189653 ATTCAGAAGGAGTCGACGCTGCATCTCGTGCTGCGTCTGCGTGGTGG 3189607
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || ||||| || || || || || | | |
Sbjct 3189605 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTAGAGGTGGAGTCGAGC 3189546
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || ||||| || ||
Sbjct 3189545 GACACGATTGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 3189486
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || |||||||||||| | | | | || ||||||
Sbjct 3189485 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTCAGCGACTATAAC 3189426
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
|| || ||||| || || || || ||||
Sbjct 3189425 ATCCAGAAGGAGTCTACCCTCCATCTTG 3189398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897195092160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |