Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 203 5e-46 seq4 147 3e-29 seq8 120 5e-21 seq3 107 3e-17 >seq1 Length=7437554 Score = 203 bits (224), Expect = 5e-46 Identities = 366/533 (69%), Gaps = 8/533 (2%) Strand=Plus/Minus Query 2018912 CCTCCCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCA 2018971 ||||| || | ||||||||||| || | ||||||||| |||| |||||| | | Sbjct 5309586 CCTCCGAAGGGTGGAAAAGTACCGGCCAGTCTTCCTCGACGACGTCGTCGGCAACACGGA 5309527 Query 2018972 CGCCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGC 2019031 | | | |||||| | || || || || ||||| || || | | | Sbjct 5309526 AACGATCGAGCGACTCAAGATCATCGCAAGAGAGGGGAATATGCCACACGTCATCATCTC 5309467 Query 2019032 GGGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGG 2019091 |||| ||| |||| |||||||| |||||| | |||||||||||| | | |||| Sbjct 5309466 GGGCATGCCGGGCATCGGCAAGACGACGAGCGTGCTGTGCCTGGCGCGGCAGATGCTGGG 5309407 Query 2019092 CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGT 2019151 || | | | ||||||||||| || ||||| || |||||||||||| | ||||| Sbjct 5309406 CGACTCGTACAAGGAGGCCGTGCTGGAGCTCAACGCCAGCGACGAGCGCGGCATCGACGT 5309347 Query 2019152 CGTGCGTAGAATCATCAAG--CATCACGCTTCGAAAAGAA--TCGACCTGCCGCCCGGCC 2019207 |||||| | ||||||| | || ||| | ||||| || ||||| |||| | Sbjct 5309346 CGTGCGGAACCGCATCAAGGGCTTCGCGC----AGAAGAAGGTCACGCTGCCCGCCGGGC 5309291 Query 2019208 GCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCC 2019267 | |||||| | ||||||| || ||||| ||| || | ||||||| || |||||||| | Sbjct 5309290 GGCACAAGCTCGTCATCCTGGACGAGGCGGACAGCATGACGTCGGGCGCGCAGCAGGCGC 5309231 Query 2019268 TCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGT 2019327 | || ||| ||||| | ||| | |||||||||||||||||| | || |||||| || Sbjct 5309230 TGCGGCGGACGATGGAGATCTACTCGAACACGACGCGGTTTGCGTTCGCGTGCAACCAGT 5309171 Query 2019328 CGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCA 2019387 | | | ||||||| | || ||| | ||||| ||| |||| | ||| |||| Sbjct 5309170 CCAACAAGATCATCGAGCCGCTGCAGTCGAGGTGCGCTATCCTGCGGTATGCCAAGCTCA 5309111 Query 2019388 CCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440 | ||||| ||| ||| | ||||||| |||| ||||| ||||| |||||| Sbjct 5309110 CGGACGCGCAGGTCGTCAAGCGTCTGATGCAGATCATCGAGGCCGAGAAGGTC 5309058 Score = 147 bits (162), Expect = 3e-29 Identities = 186/254 (73%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || ||| | |||||| |||||| |||||||||||||| | | Sbjct 4690423 TGACACCAGCCTTCTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCCA 4690482 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCC-- 794008 | ||||| |||||| | ||| ||||||| | | |||| ||||||| || Sbjct 4690483 GGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGAGGACTTGTAGATCTTCTCGTTGCCAA 4690542 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 | |||||| || || |||||||||||||| ||||||||||| ||||||| |||||| Sbjct 4690543 GGGCGACG--AGGAGACGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGTT 4690600 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||||||| || || ||| || | |||| | | ||||| | ||||||| ||| || Sbjct 4690601 CATGCCGAGCAGGGCGCAGGGAAGAGCCTCGGTAAGGAACTCCTGCTCGATCCTGACAGC 4690660 Query 794129 CTCGATGATGATCT 794142 ||| ||||||||| Sbjct 4690661 GTCGGTGATGATCT 4690674 Score = 120 bits (132), Expect = 5e-21 Identities = 162/223 (73%), Gaps = 11/223 (5%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | |||||| || | |||||||| ||||||| | | |||||||| Sbjct 4691118 AAGCAGCGGGCCTCAGGAATCTGGACCTCGCCGCTGAAGCGCTCAACGAGGTTCTCGTTG 4691177 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 ||||||||||| ||||||||| |||||||||| ||| ||| |||| ||| ||| Sbjct 4691178 ACGATGCCGTCCGAGGCGGCGAAGAAGGCGAGGATGTGAGAGATGAAGTACTTCTCATCG 4691237 Query 796261 TCGCTGA-GCGA--GACCCAGTGGACCGTG----TCGGCGCCGAGGTCGACCTCCTCGGC 796313 ||| ||| |||| | ||||| |||| || | ||| || | ||||||||| Sbjct 4691238 TCGTTGATGCGATTGTTCCAGT----CGTGGAGATCCTTGGAGAGATCAATCTCCTCGGC 4691293 Query 796314 GGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 ||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct 4691294 GGTCCAAAAAGAGGCCTCGGCCTTCTTGTACATCTGCCAGATC 4691336 Score = 109 bits (120), Expect = 9e-18 Identities = 96/120 (80%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 794548 GTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATG 794607 || ||||||||| ||||||| || || | | | ||||||| ||||||||||||| Sbjct 4691004 GTCTCGATGGCGTTGAAGAGGTACTCGCGCTGGGCGTGCTCCTTGATGTAGGTGTCGATG 4691063 Query 794608 AGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 || |||||||||||||| ||||||||||| || || |||||||||||| || |||||| Sbjct 4691064 AGCAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAG 4691123 Score = 91.5 bits (100), Expect = 2e-12 Identities = 109/147 (74%), Gaps = 6/147 (4%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| ||||| |||||| ||| ||||||||||||||||| ||||| Sbjct 4690745 ACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCCACGCTT 4690804 Query 794400 CTTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 ||| ||||| ||||| |||| || || || ||| ||||| ||||| || || || Sbjct 4690805 CTTCAGCCAGAAGATAGAGGCAAAGGCACCGC---TGAAGAAGATACCCTCAACAGCAGC 4690861 Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGT 794483 ||| | ||||| |||| ||| || || Sbjct 4690862 GAAGGCAACGAGACGCTGGGCGAAGGT 4690888 >seq4 Length=5284358 Score = 147 bits (162), Expect = 3e-29 Identities = 333/501 (66%), Gaps = 15/501 (3%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || || | || |||| ||| || || ||||||||||| | | |||||||| Sbjct 2050221 CTGGTCCACGTATCTGGCAGTGTTGTTGAACACTCGGAGCATGGGGATGATACCGTTGGA 2050280 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||||| || | ||||| ||||| ||| || | ||| || | || Sbjct 2050281 GGTACCGTTGGTGCCGGCAATGTAGGAGCCCGTGGCACGGATGCGGTGGACGTTCAGACC 2050340 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || ||||| ||| ||||||||| | ||||| | || || || |||||||||||||| Sbjct 2050341 AATACCGCCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATGCCCTC 2050400 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| |||||||||||| || ||||||||||| || | ||| ||| || Sbjct 2050401 AATGCTGTCATCCTTCATGTCCACAAGGAAGCACGACGACAGCTGAGCCTGCGGCGTACC 2050460 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 || |||||||| ||||| | || ||| | ||| ||||||| | |||||| Sbjct 2050461 AGCGTTGAAGAGTGTGGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTTGTAGGT 2050520 Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899 ||| || ||| | | | || |||| || || |||| ||| || Sbjct 2050521 CTCGATGACACGCTCAA-----TGTT----GTCG------CCCCAGATACCGACGGCAAC 2050565 Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959 ||||||||||||| ||| || |||||||||| || | |||| |||||| || Sbjct 2050566 ACGCATGATCATGTGCTGCGGACGCTCGACGATCTTACCGTTGAGCTTGAGCAGGTATGA 2050625 Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019 || || ||| | || |||||| |||| | ||| || || | | ||||| Sbjct 2050626 ACGCTCGAGCGTCTTGAATCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACAATGGC 2050685 Query 2074020 GGCGTCGAGGGCCTCCTTGTG 2074040 | |||||| | |||||||| Sbjct 2050686 TGAGTCGAGCTCTTCCTTGTG 2050706 Score = 107 bits (118), Expect = 3e-17 Identities = 284/436 (65%), Gaps = 8/436 (2%) Strand=Plus/Plus Query 2071581 GACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTTGCTGGTC 2071638 || ||| ||||| ||||||| | || |||| || ||||||| ||||||||| | Sbjct 2049789 GATCTCTGTGCAGAGGTTGGAG--CTGCGGATGGTCCCGAGGTTCTTCTGGTTGCTCTTG 2049846 Query 2071639 AGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACG 2071698 ||||| ||| ||||||| |||||| |||| || ||||| |||| ||| || | Sbjct 2049847 CGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAGG 2049906 Query 2071699 ATGGCCGACCAAA--TTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNN 2071756 |||| |||| | || | |||||| | || | | |||| |||| Sbjct 2049907 ATGGAGTACCAGAGCTTCTGGGCGCGG--ATCGTCTTGCGACCGCGACCCTCGCGCTCGT 2049964 Query 2071757 NNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGG 2071816 | || || || || | | |||| ||| ||| ||||| || |||| Sbjct 2049965 ACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCAAGGCCAGGGCACTCGT 2050024 Query 2071817 ACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACG 2071876 ||||| | ||| | ||| |||||| || |||| || ||| || || ||| Sbjct 2050025 TAGGGCACATGAGGGTCCACTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCGGGGA 2050084 Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||| ||| || ||||| || || || || ||||||||| ||||||||||| | Sbjct 2050085 TCCAGAGGGCGAGGAAGAGGTCACGAGCGCGCACCTCCTCCTTTCCGTGGTTCTTGCGGA 2050144 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 ||||||| | |||| || || | |||||| ||||| |||||| ||||||||| || Sbjct 2050145 GGTCGAGGAACTCGAAGACATCCGAGTGCCAAGGCTCTAGGTAGATGGCAAAGGCACCAG 2050204 Query 2071997 TGCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 2050205 GACGCTTGTTGCCACC 2050220 >seq8 Length=3412499 Score = 120 bits (132), Expect = 5e-21 Identities = 92/109 (84%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| |||||||||||||||||||||| || ||||| | || |||||||| || |||||| Sbjct 1643054 GCCTCCAACTACCTCGACATCAAGCCGCTGCTCGACGTTGGTTGCAAGACGGTCGCCAAC 1642995 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 | |||||||||||||| || ||||| ||||| ||||| || ||||||| Sbjct 1642994 ATGATCAAGGGCAAGTCCCCTGAGGAGATCCGTAAGACTTTCAACATCA 1642946 >seq3 Length=5313354 Score = 107 bits (118), Expect = 3e-17 Identities = 133/178 (75%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| ||||| || ||||||||| ||||||| || || ||| Sbjct 3309951 GTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCCAGCTCACCAGGCAG 3309892 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| ||||| || | |||||||||||| || | | ||| ||| |||||| || | Sbjct 3309891 GATGAGGCGGACAGAGGTCTGGATCTCACGCGAGGAGATGGTGGACTTCTTGTT-GTAGG 3309833 Query 1485591 CGCCAGGC-GGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 || || || | |||||| ||| | | ||| |||| ||||| | || || | |||| Sbjct 3309832 CGGCAAGCTTGGAGGCCTCAGTGGCAACGCGCTCGAAGATGTC-TGGATAACCCAGTT 3309776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916238741031608