Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1 203 5e-46
seq4 147 3e-29
seq8 120 5e-21
seq3 107 3e-17
>seq1
Length=7437554
Score = 203 bits (224), Expect = 5e-46
Identities = 366/533 (69%), Gaps = 8/533 (2%)
Strand=Plus/Minus
Query 2018912 CCTCCCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCA 2018971
||||| || | ||||||||||| || | ||||||||| |||| |||||| | |
Sbjct 5309586 CCTCCGAAGGGTGGAAAAGTACCGGCCAGTCTTCCTCGACGACGTCGTCGGCAACACGGA 5309527
Query 2018972 CGCCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGC 2019031
| | | |||||| | || || || || ||||| || || | | |
Sbjct 5309526 AACGATCGAGCGACTCAAGATCATCGCAAGAGAGGGGAATATGCCACACGTCATCATCTC 5309467
Query 2019032 GGGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGG 2019091
|||| ||| |||| |||||||| |||||| | |||||||||||| | | ||||
Sbjct 5309466 GGGCATGCCGGGCATCGGCAAGACGACGAGCGTGCTGTGCCTGGCGCGGCAGATGCTGGG 5309407
Query 2019092 CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGT 2019151
|| | | | ||||||||||| || ||||| || |||||||||||| | |||||
Sbjct 5309406 CGACTCGTACAAGGAGGCCGTGCTGGAGCTCAACGCCAGCGACGAGCGCGGCATCGACGT 5309347
Query 2019152 CGTGCGTAGAATCATCAAG--CATCACGCTTCGAAAAGAA--TCGACCTGCCGCCCGGCC 2019207
|||||| | ||||||| | || ||| | ||||| || ||||| |||| |
Sbjct 5309346 CGTGCGGAACCGCATCAAGGGCTTCGCGC----AGAAGAAGGTCACGCTGCCCGCCGGGC 5309291
Query 2019208 GCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCC 2019267
| |||||| | ||||||| || ||||| ||| || | ||||||| || |||||||| |
Sbjct 5309290 GGCACAAGCTCGTCATCCTGGACGAGGCGGACAGCATGACGTCGGGCGCGCAGCAGGCGC 5309231
Query 2019268 TCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGT 2019327
| || ||| ||||| | ||| | |||||||||||||||||| | || |||||| ||
Sbjct 5309230 TGCGGCGGACGATGGAGATCTACTCGAACACGACGCGGTTTGCGTTCGCGTGCAACCAGT 5309171
Query 2019328 CGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCA 2019387
| | | ||||||| | || ||| | ||||| ||| |||| | ||| ||||
Sbjct 5309170 CCAACAAGATCATCGAGCCGCTGCAGTCGAGGTGCGCTATCCTGCGGTATGCCAAGCTCA 5309111
Query 2019388 CCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440
| ||||| ||| ||| | ||||||| |||| ||||| ||||| ||||||
Sbjct 5309110 CGGACGCGCAGGTCGTCAAGCGTCTGATGCAGATCATCGAGGCCGAGAAGGTC 5309058
Score = 147 bits (162), Expect = 3e-29
Identities = 186/254 (73%), Gaps = 4/254 (2%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || ||| | |||||| |||||| |||||||||||||| | |
Sbjct 4690423 TGACACCAGCCTTCTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCCA 4690482
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCC-- 794008
| ||||| |||||| | ||| ||||||| | | |||| ||||||| ||
Sbjct 4690483 GGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGAGGACTTGTAGATCTTCTCGTTGCCAA 4690542
Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068
| |||||| || || |||||||||||||| ||||||||||| ||||||| ||||||
Sbjct 4690543 GGGCGACG--AGGAGACGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGTT 4690600
Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128
|||||||| || || ||| || | |||| | | ||||| | ||||||| ||| ||
Sbjct 4690601 CATGCCGAGCAGGGCGCAGGGAAGAGCCTCGGTAAGGAACTCCTGCTCGATCCTGACAGC 4690660
Query 794129 CTCGATGATGATCT 794142
||| |||||||||
Sbjct 4690661 GTCGGTGATGATCT 4690674
Score = 120 bits (132), Expect = 5e-21
Identities = 162/223 (73%), Gaps = 11/223 (5%)
Strand=Plus/Plus
Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200
|| || | |||||| || | |||||||| ||||||| | | ||||||||
Sbjct 4691118 AAGCAGCGGGCCTCAGGAATCTGGACCTCGCCGCTGAAGCGCTCAACGAGGTTCTCGTTG 4691177
Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260
||||||||||| ||||||||| |||||||||| ||| ||| |||| ||| |||
Sbjct 4691178 ACGATGCCGTCCGAGGCGGCGAAGAAGGCGAGGATGTGAGAGATGAAGTACTTCTCATCG 4691237
Query 796261 TCGCTGA-GCGA--GACCCAGTGGACCGTG----TCGGCGCCGAGGTCGACCTCCTCGGC 796313
||| ||| |||| | ||||| |||| || | ||| || | |||||||||
Sbjct 4691238 TCGTTGATGCGATTGTTCCAGT----CGTGGAGATCCTTGGAGAGATCAATCTCCTCGGC 4691293
Query 796314 GGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356
||||||||| |||||||||||||| |||||||||| ||| |||
Sbjct 4691294 GGTCCAAAAAGAGGCCTCGGCCTTCTTGTACATCTGCCAGATC 4691336
Score = 109 bits (120), Expect = 9e-18
Identities = 96/120 (80%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 794548 GTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATG 794607
|| ||||||||| ||||||| || || | | | ||||||| |||||||||||||
Sbjct 4691004 GTCTCGATGGCGTTGAAGAGGTACTCGCGCTGGGCGTGCTCCTTGATGTAGGTGTCGATG 4691063
Query 794608 AGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667
|| |||||||||||||| ||||||||||| || || |||||||||||| || ||||||
Sbjct 4691064 AGCAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAG 4691123
Score = 91.5 bits (100), Expect = 2e-12
Identities = 109/147 (74%), Gaps = 6/147 (4%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| ||| ||||| |||||| ||| ||||||||||||||||| |||||
Sbjct 4690745 ACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCCACGCTT 4690804
Query 794400 CTTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456
||| ||||| ||||| |||| || || || ||| ||||| ||||| || || ||
Sbjct 4690805 CTTCAGCCAGAAGATAGAGGCAAAGGCACCGC---TGAAGAAGATACCCTCAACAGCAGC 4690861
Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGT 794483
||| | ||||| |||| ||| || ||
Sbjct 4690862 GAAGGCAACGAGACGCTGGGCGAAGGT 4690888
>seq4
Length=5284358
Score = 147 bits (162), Expect = 3e-29
Identities = 333/501 (66%), Gaps = 15/501 (3%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| || || | || |||| ||| || || ||||||||||| | | ||||||||
Sbjct 2050221 CTGGTCCACGTATCTGGCAGTGTTGTTGAACACTCGGAGCATGGGGATGATACCGTTGGA 2050280
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||||||||||| || | ||||| ||||| ||| || | ||| || | ||
Sbjct 2050281 GGTACCGTTGGTGCCGGCAATGTAGGAGCCCGTGGCACGGATGCGGTGGACGTTCAGACC 2050340
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| ||||| ||| ||||||||| | ||||| | || || || ||||||||||||||
Sbjct 2050341 AATACCGCCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATGCCCTC 2050400
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| |||||||||||| || ||||||||||| || | ||| ||| ||
Sbjct 2050401 AATGCTGTCATCCTTCATGTCCACAAGGAAGCACGACGACAGCTGAGCCTGCGGCGTACC 2050460
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839
|| |||||||| ||||| | || ||| | ||| ||||||| | ||||||
Sbjct 2050461 AGCGTTGAAGAGTGTGGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTTGTAGGT 2050520
Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899
||| || ||| | | | || |||| || || |||| ||| ||
Sbjct 2050521 CTCGATGACACGCTCAA-----TGTT----GTCG------CCCCAGATACCGACGGCAAC 2050565
Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959
||||||||||||| ||| || |||||||||| || | |||| |||||| ||
Sbjct 2050566 ACGCATGATCATGTGCTGCGGACGCTCGACGATCTTACCGTTGAGCTTGAGCAGGTATGA 2050625
Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019
|| || ||| | || |||||| |||| | ||| || || | | |||||
Sbjct 2050626 ACGCTCGAGCGTCTTGAATCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACAATGGC 2050685
Query 2074020 GGCGTCGAGGGCCTCCTTGTG 2074040
| |||||| | ||||||||
Sbjct 2050686 TGAGTCGAGCTCTTCCTTGTG 2050706
Score = 107 bits (118), Expect = 3e-17
Identities = 284/436 (65%), Gaps = 8/436 (2%)
Strand=Plus/Plus
Query 2071581 GACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTTGCTGGTC 2071638
|| ||| ||||| ||||||| | || |||| || ||||||| ||||||||| |
Sbjct 2049789 GATCTCTGTGCAGAGGTTGGAG--CTGCGGATGGTCCCGAGGTTCTTCTGGTTGCTCTTG 2049846
Query 2071639 AGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACG 2071698
||||| ||| ||||||| |||||| |||| || ||||| |||| ||| || |
Sbjct 2049847 CGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAGG 2049906
Query 2071699 ATGGCCGACCAAA--TTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNN 2071756
|||| |||| | || | |||||| | || | | |||| ||||
Sbjct 2049907 ATGGAGTACCAGAGCTTCTGGGCGCGG--ATCGTCTTGCGACCGCGACCCTCGCGCTCGT 2049964
Query 2071757 NNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGG 2071816
| || || || || | | |||| ||| ||| ||||| || ||||
Sbjct 2049965 ACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCAAGGCCAGGGCACTCGT 2050024
Query 2071817 ACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACG 2071876
||||| | ||| | ||| |||||| || |||| || ||| || || |||
Sbjct 2050025 TAGGGCACATGAGGGTCCACTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCGGGGA 2050084
Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936
|||| ||| || ||||| || || || || ||||||||| ||||||||||| |
Sbjct 2050085 TCCAGAGGGCGAGGAAGAGGTCACGAGCGCGCACCTCCTCCTTTCCGTGGTTCTTGCGGA 2050144
Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996
||||||| | |||| || || | |||||| ||||| |||||| ||||||||| ||
Sbjct 2050145 GGTCGAGGAACTCGAAGACATCCGAGTGCCAAGGCTCTAGGTAGATGGCAAAGGCACCAG 2050204
Query 2071997 TGCGCTTGCCGCCGCC 2072012
|||||| ||| ||
Sbjct 2050205 GACGCTTGTTGCCACC 2050220
>seq8
Length=3412499
Score = 120 bits (132), Expect = 5e-21
Identities = 92/109 (84%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| |||||||||||||||||||||| || ||||| | || |||||||| || ||||||
Sbjct 1643054 GCCTCCAACTACCTCGACATCAAGCCGCTGCTCGACGTTGGTTGCAAGACGGTCGCCAAC 1642995
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
| |||||||||||||| || ||||| ||||| ||||| || |||||||
Sbjct 1642994 ATGATCAAGGGCAAGTCCCCTGAGGAGATCCGTAAGACTTTCAACATCA 1642946
>seq3
Length=5313354
Score = 107 bits (118), Expect = 3e-17
Identities = 133/178 (75%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| || ||||||||| ||||||| || || |||
Sbjct 3309951 GTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCCAGCTCACCAGGCAG 3309892
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| ||||| || | |||||||||||| || | | ||| ||| |||||| || |
Sbjct 3309891 GATGAGGCGGACAGAGGTCTGGATCTCACGCGAGGAGATGGTGGACTTCTTGTT-GTAGG 3309833
Query 1485591 CGCCAGGC-GGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
|| || || | |||||| ||| | | ||| |||| ||||| | || || | ||||
Sbjct 3309832 CGGCAAGCTTGGAGGCCTCAGTGGCAACGCGCTCGAAGATGTC-TGGATAACCCAGTT 3309776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916238741031608
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