Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq3 140 2e-28
seq4 116 2e-21
seq1 113 3e-20
>seq3
Length=5313354
Score = 140 bits (154), Expect = 2e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||| | ||||||||||||||| ||||| ||||| || ||| |||| ||||
Sbjct 4707932 AGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 4707991
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||||||||| || |||||||| | || | |||||||||||
Sbjct 4707992 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 4708051
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | ||| || || | ||| || |||
Sbjct 4708052 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 4708111
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| |||||||||||||| || || ||||||||
Sbjct 4708112 TTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 4708143
>seq4
Length=5284358
Score = 116 bits (128), Expect = 2e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| ||||||||| ||||||||||| ||| |||| ||||
Sbjct 3189394 AGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTATAGTCGCTGAGGGTGCGACCATCC 3189453
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || |||||||| || || |||||||| | || | |||||||||||
Sbjct 3189454 TCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 3189513
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| || | | ||| || || | ||| || |||
Sbjct 3189514 TGAATCTTGCTCTTCACGTTGTCAATCGTGTCGCTCGACTCCACCTCTAGGGTGATAGTC 3189573
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || |||||||||||
Sbjct 3189574 TTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3189605
Score = 116 bits (128), Expect = 2e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||| ||||| || ||| |||| | || || || ||||| || || ||
Sbjct 3189642 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAA 3189701
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||| || || |||||||| |||| | ||||||||||| | || || || ||
Sbjct 3189702 GATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTGCTCTTCACATT 3189761
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| ||| | |||||| || | || || ||||| |||||||||||||| ||
Sbjct 3189762 GTCGATCGTGTCAGATGACTCGACCTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTGAC 3189821
Query 34966 AAAGATCTGCAT 34977
|||||||||||
Sbjct 3189822 GAAGATCTGCAT 3189833
Score = 109 bits (120), Expect = 4e-19
Identities = 148/204 (73%), Gaps = 8/204 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||||| ||| ||||||||||||||| || || || ||| | || | ||
Sbjct 3189850 AGGACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGAGAGGGTTCGGCCGTCC 3189909
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || ||||||||||| || ||||| || | || | |||||||||||
Sbjct 3189910 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCC 3189969
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| || | |||||| |||| ||| ||
Sbjct 3189970 TGAATCTTCGACTTAAC--AT--TGTCGATAGTATCGGACGACTCGACCTCAAGGGTGAT 3190025
Query 34942 GGTCTTTCCCGTGAGGGTCTTTAC 34965
|||||| ||||| |||||||| ||
Sbjct 3190026 GGTCTTGCCCGTCAGGGTCTTGAC 3190049
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | |||| ||||||||| ||||| || || || || |||| | ||
Sbjct 3190134 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCGTCC 3190193
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || ||||| || || || |||||||| | || | |||||||||||
Sbjct 3190194 TCAAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 3190253
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || || |||||| || | ||| ||||||
Sbjct 3190254 TGGATCTTCGACTTGACGTTGTCGATAGTATCCGAGGACTCGACCTCGAGGGTGATGGTC 3190313
Query 34946 TTTCCCGTGA 34955
|| || ||||
Sbjct 3190314 TTGCCAGTGA 3190323
>seq1
Length=7437554
Score = 113 bits (124), Expect = 3e-20
Identities = 141/191 (74%), Gaps = 8/191 (4%)
Strand=Plus/Plus
Query 34782 TGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGG 34841
|||| ||||||| ||||| ||||| || ||| |||| |||| || || ||||| ||||
Sbjct 2326931 TGCTAACCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGG 2326990
Query 34842 CGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGA 34901
|||| ||||| || |||||||| | || | ||||||||||| | || || ||||
Sbjct 2326991 CGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA 2327050
Query 34902 CGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGG 34957
| || | ||||| || || |||||| |||| ||| |||||||| ||||| |||
Sbjct 2327051 C--AT--TGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGG 2327106
Query 34958 GTCTTTACAAA 34968
||||| || ||
Sbjct 2327107 GTCTTCACGAA 2327117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692514204568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |