Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4 161 9e-35 >seq4 Length=5284358 Score = 161 bits (178), Expect = 9e-35 Identities = 959/1509 (64%), Gaps = 41/1509 (3%) Strand=Plus/Plus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| || || |||||||| ||||| ||||| | | || | ||| ||| | ||| Sbjct 2049169 TTGACGACCTGGAACTCGCCAGCCAGGACACGACGCTGGTAGATGTTGGAGGTGTAGGGC 2049228 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || || |||| || ||||| | || || | ||| | || || |||||| || || Sbjct 2049229 TCGAAGCACTCGTTGTTGCCAAGAATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAACG 2049288 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 | || || || || | ||||| | | ||| | ||||| | | | ||| |||||| Sbjct 2049289 AGCAGAGAGTTGCGGATACCGTGCTCCTTGATCTGCTCCTTGAGGCTGTCCCACTCCCAC 2049348 Query 147073 ATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCC-TCGACTGGCGGGACT 147131 | |||||| | || | |||||||||| |||| || | || ||| ||| || Sbjct 2049349 AGGTCAGAGGGCTTGACATCCCACATGTCGAACTGCAGAATACCCTCGGA-GGCAGGGGA 2049407 Query 147132 GCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCG---AG 147188 ||| ||| |||| |||| || | || || | || || | | |||| || Sbjct 2049408 GCCCTTGAAGGTAGAGTAGGGGCCCTGCTCCTTGGCAAGCTC-CATC--GACTCGGTGAG 2049464 Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAG--GACGGTCGCTTCTTCGCTC 147246 || | | ||| || || ||| ||| || ||||| | | ||| ||||| | Sbjct 2049465 GGCGGCGTGGTAGATAGTCTCGAAGATCTGCTTGTTCAACTGGCGG--GCTTCGGGTGAC 2049522 Query 147247 TCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306 ||| |||||| || ||| || || |||||||| | |||||||| ||| | ||||| Sbjct 2049523 TCGAAAGGCAGGCGAAGAGCCAGGAAAGCATCGGCAAGACCCTGGACACCCAGACCGATG 2049582 Query 147307 GGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT--ATGGGATAGTGGTTGCGATCAA 147364 ||||| || ||||||| | || || || | ||| ||||||||| || | Sbjct 2049583 GGTCGGTGGCGCATGTTGCTGT--TACGAGCCTCCTGCACGGGGTAGTGGTTGACGTCGA 2049640 Query 147365 TAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGA-GTTTCTCGAAATCA 147423 | |||||||| ||||| || || || || | || | || ||| | |||| ||| || Sbjct 2049641 TGATCTTGTTTAGGTTGCGAACAACGACCTGGGTGAC-GTCGTGAAGCTTCTGGAAGTCG 2049699 Query 147424 TA--AGTCC-CGTCTTCGACA-CGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCA 147479 || || || ||| | | || | || ||| || || || | ||| || || ||||| Sbjct 2049700 TAGCAGCCCTCGTTGTAGTCAACATAGGCA--GG--CAGAGCCAGAGAGGCAAGGTTGCA 2049755 Query 147480 GACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTT 147539 |||||| ||| || | | || ||||| | ||| || | ||| |||||| || Sbjct 2049756 GACGGCGACCTCATCAGGGGCGGAGTACTCAATGATCTCTGTGCAGAGGTTGGAGCTGCG 2049815 Query 147540 TATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTA 147599 ||| || | || | ||| ||||| || || ||||| || || ||| |||||||| | Sbjct 2049816 GATGGTCCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAA 2049875 Query 147600 CGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAGGTCCTGCGCTCGCAC 147659 || ||| ||||| || | || | ||| | || | ||| || || | Sbjct 2049876 GGGGTTGCCAGTCTCAGTCTGGGCCTCGAGGATGGAGTACCAGAGCTTCTGGGCGCGGAT 2049935 Query 147660 CCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCC 147719 | || ||| ||| |||||| |||||| |||||||| ||| ||||| || || Sbjct 2049936 CGTCTTGCGACCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCACC 2049995 Query 147720 GTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGC 147779 |||||| ||||||||||| || |||| | || ||||| || | |||| | ||| | Sbjct 2049996 GTAGCAGTCGGCAAGGCCAGGGCACTCGTTAGGGCACATGAGGGTCCACTCGCCGTTCTT 2050055 Query 147780 GTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTT 147839 | || || ||| || ||||| || | ||| || ||| | || || || || Sbjct 2050056 CTCCACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGGAAGAGGTCACGAGC-GC 2050114 Query 147840 GCA-ATCCTCGGCGCCCATGTTGCGTTTCAAATT--AAGCACGCTATAGATGTCGGCGTG 147896 ||| ||||| || || | | | | | | | || | | ||| || | ||| Sbjct 2050115 GCACCTCCTC-CTTTCCGTGGTTCTTGCGGAGGTCGAGGAACTCGA-AGACATCCGAGTG 2050172 Query 147897 CCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATG 147953 ||| || || | ||||| ||| | ||||| |||| || || |||||||| || | Sbjct 2050173 CCAAGGCTCTAGGTAGATGGCAAAGGCACCAGGACGCTTGTTGCCACCCTGGTCCACGTA 2050232 Query 147954 GCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGT 148013 | | ||||||| ||||| || | |||||| | ||| | | || |||||||| Sbjct 2050233 TCTGGCAGTGTTGTTGAACACTCGGAGCATGGGGATGATACCGTTGGAGGTACCGTTGGT 2050292 Query 148014 GGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCC-GC 148072 | || | | ||| ||| || | ||| ||||| | ||||| ||||| || Sbjct 2050293 GCCGGCAATGTAGGAGCCCGTGGCACGGATGCGGTGGACGTTCAGACCAATACCGCCAGC 2050352 Query 148073 CGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGT 148132 | | ||| || || ||||| | || ||||||||| || |||||||| | Sbjct 2050353 CAT-CTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATGCCCTCAATGCTGTCAT 2050411 Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAA 148192 || | | | | | || ||||| ||| || | | |||| || || ||| | Sbjct 2050412 CCTTCATGTCCACAAGGAAGCACGACGACAGCTGAGCCTGCGGCGTACCAGCGTTGAAGA 2050471 Query 148193 GGGTGGGACTCGCGTGCGTAAACAATTT--TTGACTCATCATGCGATACGTCTCAATAGC 148250 | |||||| ||||| || || || || | || ||| | | || ||||| || | Sbjct 2050472 GTGTGGGAGAGGCGTGGGTGAAGAACTTGCTGGA--CATGAGGTTGTAGGTCTCGATGAC 2050529 Query 148251 GTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCG 148310 || |||| |||||| || || | || || ||||||| ||||||||| || || Sbjct 2050530 ACGCTCAATGTTGTCGCCCCAGATACCGACGGCAACACGCATGATCATGTGCTGCGGACG 2050589 Query 148311 TTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAA 148370 ||| | | | | ||||| |||||| || ||| | ||||| || ||| | || || Sbjct 2050590 CTCGACGATCTTACCGTTGAGCTTGAGCAGGTATGAACGCTCGAGCGTCTTGAATCCGAA 2050649 Query 148371 GTACTTGTA 148379 ||||| ||| Sbjct 2050650 GTACTGGTA 2050658 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| |||| || | ||| | | ||||| || ||||||||||||||| | ||| Sbjct 3189612 ACGCAGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 3189671 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || || |||||||| ||||| | | |||| |||||||| || || || || ||||| Sbjct 3189672 GCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCC 3189731 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || ||| || |||| | || | || || | | ||| || || | Sbjct 3189732 CTCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGACCTCCAG 3189791 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| | ||| ||||| || || || || | ||| |||||||| Sbjct 3189792 CGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610771049920