Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq4 161 9e-35
>seq4
Length=5284358
Score = 161 bits (178), Expect = 9e-35
Identities = 959/1509 (64%), Gaps = 41/1509 (3%)
Strand=Plus/Plus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952
||||| || || |||||||| ||||| ||||| | | || | ||| ||| | |||
Sbjct 2049169 TTGACGACCTGGAACTCGCCAGCCAGGACACGACGCTGGTAGATGTTGGAGGTGTAGGGC 2049228
Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012
|| || |||| || ||||| | || || | ||| | || || |||||| || ||
Sbjct 2049229 TCGAAGCACTCGTTGTTGCCAAGAATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAACG 2049288
Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072
| || || || || | ||||| | | ||| | ||||| | | | ||| ||||||
Sbjct 2049289 AGCAGAGAGTTGCGGATACCGTGCTCCTTGATCTGCTCCTTGAGGCTGTCCCACTCCCAC 2049348
Query 147073 ATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCC-TCGACTGGCGGGACT 147131
| |||||| | || | |||||||||| |||| || | || ||| ||| ||
Sbjct 2049349 AGGTCAGAGGGCTTGACATCCCACATGTCGAACTGCAGAATACCCTCGGA-GGCAGGGGA 2049407
Query 147132 GCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCG---AG 147188
||| ||| |||| |||| || | || || | || || | | |||| ||
Sbjct 2049408 GCCCTTGAAGGTAGAGTAGGGGCCCTGCTCCTTGGCAAGCTC-CATC--GACTCGGTGAG 2049464
Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAG--GACGGTCGCTTCTTCGCTC 147246
|| | | ||| || || ||| ||| || ||||| | | ||| ||||| |
Sbjct 2049465 GGCGGCGTGGTAGATAGTCTCGAAGATCTGCTTGTTCAACTGGCGG--GCTTCGGGTGAC 2049522
Query 147247 TCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306
||| |||||| || ||| || || |||||||| | |||||||| ||| | |||||
Sbjct 2049523 TCGAAAGGCAGGCGAAGAGCCAGGAAAGCATCGGCAAGACCCTGGACACCCAGACCGATG 2049582
Query 147307 GGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT--ATGGGATAGTGGTTGCGATCAA 147364
||||| || ||||||| | || || || | ||| ||||||||| || |
Sbjct 2049583 GGTCGGTGGCGCATGTTGCTGT--TACGAGCCTCCTGCACGGGGTAGTGGTTGACGTCGA 2049640
Query 147365 TAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGA-GTTTCTCGAAATCA 147423
| |||||||| ||||| || || || || | || | || ||| | |||| ||| ||
Sbjct 2049641 TGATCTTGTTTAGGTTGCGAACAACGACCTGGGTGAC-GTCGTGAAGCTTCTGGAAGTCG 2049699
Query 147424 TA--AGTCC-CGTCTTCGACA-CGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCA 147479
|| || || ||| | | || | || ||| || || || | ||| || || |||||
Sbjct 2049700 TAGCAGCCCTCGTTGTAGTCAACATAGGCA--GG--CAGAGCCAGAGAGGCAAGGTTGCA 2049755
Query 147480 GACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTT 147539
|||||| ||| || | | || ||||| | ||| || | ||| |||||| ||
Sbjct 2049756 GACGGCGACCTCATCAGGGGCGGAGTACTCAATGATCTCTGTGCAGAGGTTGGAGCTGCG 2049815
Query 147540 TATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTA 147599
||| || | || | ||| ||||| || || ||||| || || ||| |||||||| |
Sbjct 2049816 GATGGTCCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAA 2049875
Query 147600 CGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAGGTCCTGCGCTCGCAC 147659
|| ||| ||||| || | || | ||| | || | ||| || || |
Sbjct 2049876 GGGGTTGCCAGTCTCAGTCTGGGCCTCGAGGATGGAGTACCAGAGCTTCTGGGCGCGGAT 2049935
Query 147660 CCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCC 147719
| || ||| ||| |||||| |||||| |||||||| ||| ||||| || ||
Sbjct 2049936 CGTCTTGCGACCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCACC 2049995
Query 147720 GTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGC 147779
|||||| ||||||||||| || |||| | || ||||| || | |||| | ||| |
Sbjct 2049996 GTAGCAGTCGGCAAGGCCAGGGCACTCGTTAGGGCACATGAGGGTCCACTCGCCGTTCTT 2050055
Query 147780 GTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTT 147839
| || || ||| || ||||| || | ||| || ||| | || || || ||
Sbjct 2050056 CTCCACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGGAAGAGGTCACGAGC-GC 2050114
Query 147840 GCA-ATCCTCGGCGCCCATGTTGCGTTTCAAATT--AAGCACGCTATAGATGTCGGCGTG 147896
||| ||||| || || | | | | | | | || | | ||| || | |||
Sbjct 2050115 GCACCTCCTC-CTTTCCGTGGTTCTTGCGGAGGTCGAGGAACTCGA-AGACATCCGAGTG 2050172
Query 147897 CCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATG 147953
||| || || | ||||| ||| | ||||| |||| || || |||||||| || |
Sbjct 2050173 CCAAGGCTCTAGGTAGATGGCAAAGGCACCAGGACGCTTGTTGCCACCCTGGTCCACGTA 2050232
Query 147954 GCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGT 148013
| | ||||||| ||||| || | |||||| | ||| | | || ||||||||
Sbjct 2050233 TCTGGCAGTGTTGTTGAACACTCGGAGCATGGGGATGATACCGTTGGAGGTACCGTTGGT 2050292
Query 148014 GGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCC-GC 148072
| || | | ||| ||| || | ||| ||||| | ||||| ||||| ||
Sbjct 2050293 GCCGGCAATGTAGGAGCCCGTGGCACGGATGCGGTGGACGTTCAGACCAATACCGCCAGC 2050352
Query 148073 CGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGT 148132
| | ||| || || ||||| | || ||||||||| || |||||||| |
Sbjct 2050353 CAT-CTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATGCCCTCAATGCTGTCAT 2050411
Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAA 148192
|| | | | | | || ||||| ||| || | | |||| || || ||| |
Sbjct 2050412 CCTTCATGTCCACAAGGAAGCACGACGACAGCTGAGCCTGCGGCGTACCAGCGTTGAAGA 2050471
Query 148193 GGGTGGGACTCGCGTGCGTAAACAATTT--TTGACTCATCATGCGATACGTCTCAATAGC 148250
| |||||| ||||| || || || || | || ||| | | || ||||| || |
Sbjct 2050472 GTGTGGGAGAGGCGTGGGTGAAGAACTTGCTGGA--CATGAGGTTGTAGGTCTCGATGAC 2050529
Query 148251 GTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCG 148310
|| |||| |||||| || || | || || ||||||| ||||||||| || ||
Sbjct 2050530 ACGCTCAATGTTGTCGCCCCAGATACCGACGGCAACACGCATGATCATGTGCTGCGGACG 2050589
Query 148311 TTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAA 148370
||| | | | | ||||| |||||| || ||| | ||||| || ||| | || ||
Sbjct 2050590 CTCGACGATCTTACCGTTGAGCTTGAGCAGGTATGAACGCTCGAGCGTCTTGAATCCGAA 2050649
Query 148371 GTACTTGTA 148379
||||| |||
Sbjct 2050650 GTACTGGTA 2050658
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| |||| || | ||| | | ||||| || ||||||||||||||| | |||
Sbjct 3189612 ACGCAGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 3189671
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| || |||||||| ||||| | | |||| |||||||| || || || || |||||
Sbjct 3189672 GCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCC 3189731
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| || || ||| || |||| | || | || || | | ||| || || |
Sbjct 3189732 CTCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGACCTCCAG 3189791
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||| | ||| ||||| || || || || | ||| ||||||||
Sbjct 3189792 CGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610771049920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |