Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq1 163 3e-35
>seq1
Length=7437554
Score = 163 bits (180), Expect = 3e-35
Identities = 252/355 (71%), Gaps = 10/355 (3%)
Strand=Plus/Minus
Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165
||||| ||||| | ||||||||||||||||||||||| ||| |||||||||
Sbjct 5294692 ACGTAGAACTGTGCGAACATGTGGCACGGCGGCAGCGCCATCTTCTTCAGATCCGCGGGG 5294633
Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACC 147225
||||| ||||| | | | |||||| | || || || | || || | |
Sbjct 5294632 TTCCACGCCGACAGGATGATCCGCCTATCGTACGGACTCGTCCGCAGCT--TCCGCA--C 5294577
Query 147226 CACCTC----AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC-CGCAGTCCACGTACC 147280
|||||| |||||||| |||||||| ||| |||| ||| |||| || ||||||
Sbjct 5294576 CACCTCGGCCAGCTGGTCGACGCCCTGACCCGTATAGTCCGTCTTCGCA-TCGACGTACT 5294518
Query 147281 TGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGT 147340
||| |||||||||| ||||||||| |||||||| || ||||||||||| || ||||
Sbjct 5294517 CGGCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCACCTCCCTGT 5294458
Query 147341 GCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTC 147400
|||||| |||| | | | || |||||| | || |||| | |||||||||||| ||| |
Sbjct 5294457 GCGAGAGGCCCACGCTGTCCAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATGCGCACGC 5294398
Query 147401 CCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455
|| | || ||| | || |||| | || |||||||||||| |||||
Sbjct 5294397 CCGCGTCGCTGAGGGCGAGCGACGACGTGTTGGCCTCGATGAACCAGAGGAGCTC 5294343
Score = 116 bits (128), Expect = 4e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 146865 CCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGG 146924
|||| ||||| ||| ||||||| ||||| | | ||||||| | | || |
Sbjct 5295020 CCTCGTAATCTCCAGCACGGGGAAGTCCCGGGGCTCGCGCTCCAGCTGCGTCTCGAGCGC 5294961
Query 146925 CTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTT 146984
||| ||||||| | ||||||||| ||||| |||| | |||| | | ||||||
Sbjct 5294960 CTCGACGTGGTCGCAGTAGACGTGGGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGCAC 5294901
Query 146985 AAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGG 147044
|| || ||||| || | ||||| ||||| |||| |||||| || |||||||||||
Sbjct 5294900 GAGCTCGCAGACGTGCGCGATCATGTGCGTGAGGAGCGCGTAGCTCGCGATGTTGAAGGG 5294841
Query 147045 GACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086
||| || ||||||||||| | || | |||||| ||||||||
Sbjct 5294840 GACGCCGAGGCCCATGTCGCAGGAGCGCTGGTAGAGCTGGCA 5294799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487474860800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |