Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1 178 2e-38
seq4 172 8e-37
seq3 89.7 7e-12
>seq1
Length=7437554
Score = 178 bits (196), Expect = 2e-38
Identities = 356/528 (67%), Gaps = 0/528 (0%)
Strand=Plus/Plus
Query 332810 ACCTTTTCGGCGGCGACAATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGC 332869
||||| ||||| ||| |||| ||| || | ||| || ||||| |||||
Sbjct 5309059 ACCTTCTCGGCCTCGATGATCTGCATCAGACGCTTGACGACCTGCGCGTCCGTGAGCTTG 5309118
Query 332870 ACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTG 332929
|| | |||||||| || || | |||||| | |||||||| | | ||| ||||
Sbjct 5309119 GCATACCGCAGGATAGCGCACCTCGACTGCAGCGGCTCGATGATCTTGTTGGACTGGTTG 5309178
Query 332930 CAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGT 332989
|| || | |||||||||||||| || | | | ||||| ||| ||| || |||||
Sbjct 5309179 CACGCGAACGCAAACCGCGTCGTGTTCGAGTAGATCTCCATCGTCCGCCGCAGCGCCTGC 5309238
Query 332990 TGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGC 333049
|| || ||| ||| | || ||| |||||||| ||||||| || |||||| ||||||
Sbjct 5309239 TGCGCGCCCGACGTCATGCTGTCCGCCTCGTCCAGGATGACGAGCTTGTGCCGCCCGGCG 5309298
Query 333050 GGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCG 333109
||||| ||| | ||| ||| | |||||| || ||||||||||| | ||||
Sbjct 5309299 GGCAGCGTGACCTTCTTCTGCGCGAAGCCCTTGATGCGGTTCCGCACGACGTCGATGCCG 5309358
Query 333110 CGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACG 333169
|||||||| |||||||| || ||||||||||| | | | | |||| |
Sbjct 5309359 CGCTCGTCGCTGGCGTTGAGCTCCAGCACGGCCTCCTTGTACGAGTCGCCCAGCATCTGC 5309418
Query 333170 CGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGG 333229
|||||||||||| | |||||| |||||||| |||| ||| |||| | | || |
Sbjct 5309419 CGCGCCAGGCACAGCACGCTCGTCGTCTTGCCGATGCCCGGCATGCCCGAGATGATGACG 5309478
Query 333230 TTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCG 333289
| ||||| || || || || | |||||| | | | | | |||||||
Sbjct 5309479 TGTGGCATATTCCCCTCTCTTGCGATGATCTTGAGTCGCTCGATCGTTTCCGTGTTGCCG 5309538
Query 333290 ACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGATCCATGGGAGG 333337
|| | ||||||||| | | ||| ||||||||||| | || | |||||
Sbjct 5309539 ACGACGTCGTCGAGGAAGACTGGCCGGTACTTTTCCACCCTTCGGAGG 5309586
Score = 174 bits (192), Expect = 2e-37
Identities = 247/342 (72%), Gaps = 13/342 (4%)
Strand=Plus/Minus
Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831
|| ||| ||| | |||||| || |||||||||||||| |||||||||||||||||| | |
Sbjct 4691339 GCAGATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCTTTTTGGACCGCCGAGGAGATTG 4691281
Query 1455832 ACCTCGGCGCCGA----CACGGTCCACTGGGTG--TCGC-TGAGCGACGACGAGCGCCAT 1455884
| ||| | || |||| ||||| |||| | | |||||| ||| |
Sbjct 4691280 ATCTCTCCAAGGATCTCCACG----ACTGGAACAATCGCATCAACGACGATGAGAAGTAC 4691225
Query 1455885 TTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCT 1455944
|||||| ||| |||||||||| || ||||||| || |||||||| |||||||||
Sbjct 4691224 TTCATCTCTCACATCCTCGCCTTCTT-CGCCGCCTCGGACGGCATCGTCAACGAGAACCT 4691166
Query 1455945 GGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCA 1456004
| | ||||| | |||||||| | || ||||| || | || ||||| |||||
Sbjct 4691165 CGTTGAGCGCTTCAGCGGCGAGGTCCAGATTCCTGAGGCCCGCTGCTTCTACGGCTTCCA 4691106
Query 1456005 GATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAA 1456064
|||| || || ||||||||||| || ||||||||||| || |||||||||||| ||||
Sbjct 4691105 GATCATGATGGAGAACATCCACTCCGAGACCTACTCGCTGCTCATCGACACCTACATCAA 4691046
Query 1456065 GGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACAC 1456106
||| | | | || || ||||||| ||||||||| ||
Sbjct 4691045 GGAGCACGCCCAGCGCGAGTACCTCTTCAACGCCATCGAGAC 4691004
Score = 129 bits (142), Expect = 8e-24
Identities = 190/264 (72%), Gaps = 4/264 (2%)
Strand=Plus/Minus
Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577
|| |||||||| ||| || ||| ||||||| | ||||| | | |||| | || ||
Sbjct 4690677 AGGAGATCATCACCGACGCTGTCAGGATCGAGCAGGAGTTCCTTACCGAGGCTCTTCCCT 4690618
Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637
|| || ||||||||||||||| | |||||| ||||||||||| || ||||||||
Sbjct 4690617 GCGCCCTGCTCGGCATGAACGCCAAC-CTCATGAAGCAGTACATTGAGTTC-GTCGCCGA 4690560
Query 1456638 CCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCAT 1456697
||| || |||| || || ||| || ||||| |||| | | ||||||| ||| |
Sbjct 4690559 CCGTCTCCTCGTCGCCCTTGGCAACG-AGAAGATCTACAAGTCCTCCAACCCCTTCGACT 4690501
Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGT 1456756
|||||| ||||| || | |||||||||||||| |||||| ||||| | ||| |
Sbjct 4690500 TCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACT 4690441
Query 1456757 ACGCCAAGGCCGGCGTCACCGCCA 1456780
|| ||||| || |||| ||||
Sbjct 4690440 ACCAGAAGGCTGGTGTCATGGCCA 4690417
>seq4
Length=5284358
Score = 172 bits (190), Expect = 8e-37
Identities = 343/503 (68%), Gaps = 19/503 (4%)
Strand=Plus/Minus
Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741
|||||||| | |||||| | ||||| | | | ||| ||||| |||| ||||||
Sbjct 2050706 CACAAGGAAGAGCTCGACTCAGCCATTGTCTATGACCGTGACTTCAACTACCAGTACTTC 2050647
Query 259742 GGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGCG 259800
|| | ||| || | || | || |||||| ||| | || || ||||||||||
Sbjct 2050646 GGATTCAAGACGCTCGAGC-GTTCATACCTGCTCAAGCTCAACGGTAAGATCGTCGAGCG 2050588
Query 259801 GCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAA 259860
|| ||| | ||| |||||||||| ||| | || | |||| ||||||
Sbjct 2050587 TCCGCAGCACATGATCATGCGTGTTGCCGTCGGTA--TCTGGGG----------CGACAA 2050540
Query 259861 TGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCTCAG 259919
| |||| || ||| |||||| | |||||| ||||| ||| |||||| |
Sbjct 2050539 CA---TTGAGCGTGTCATCGAGACCTACAACCTCATGTC-CAGCAAGTTCTTCACCCACG 2050484
Query 259920 CGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGT 259979
| | ||||| ||||| || || || ||||||| | ||| ||||||||||| ||
Sbjct 2050483 CCTCTCCCACACTCTTCAACGCTGGTACGCCGCAGGCTCAGCTGTCGTCGTGCTTCCTTG 2050424
Query 259980 TGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCA 260039
|||||||||||| || || ||||||||||| ||||| |||||| ||||| | |
Sbjct 2050423 TGGACATGAAGGATGACAGCATTGAGGGCATCTACGACACCCTCAAGACCTGCGCCATGA 2050364
Query 260040 TCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCT 260099
|||||||| ||| ||||| || ||| | || ||| | || ||| ||||| |||
Sbjct 2050363 TCTCCAAGATGGCTGGCGGTATTGGTCTGAACGTCCACCGCATCCGTGCCACGGGCTCCT 2050304
Query 260100 ACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACG 260159
|| | || ||||||||||| |||||||| | | |||||||| || || || |||
Sbjct 2050303 ACATTGCCGGCACCAACGGTACCTCCAACGGTATCATCCCCATGCTCCGAGTGTTCAACA 2050244
Query 260160 ACACGGCGCGCTACGTCGACCAG 260182
|||| || | ||||| ||||||
Sbjct 2050243 ACACTGCCAGATACGTGGACCAG 2050221
>seq3
Length=5313354
Score = 89.7 bits (98), Expect = 7e-12
Identities = 120/163 (74%), Gaps = 7/163 (4%)
Strand=Plus/Plus
Query 724983 AACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC---GCCTGGCG 725039
|||| | || || | ||||| |||| ||| | | ||| |||||| || || || ||
Sbjct 3309776 AACTGGGTTATCCA-GACATCTTCGAGCGCGTTGCCACTGAGGCC--TCCAAGCTTGCCG 3309832
Query 725040 CGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATC 725099
| || ||||||| ||| ||| | |||| |||||||||||| | || ||||| |||
Sbjct 3309833 C-CTACAACAAGAAGTCCACCATCTCCTCGCGTGAGATCCAGACCTCTGTCCGCCTCATC 3309891
Query 725100 ATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| || || ||||||| ||||||||| || ||||||||||
Sbjct 3309892 CTGCCTGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 3309934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177804255467664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |