Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1 178 2e-38 seq4 172 8e-37 seq3 89.7 7e-12 >seq1 Length=7437554 Score = 178 bits (196), Expect = 2e-38 Identities = 356/528 (67%), Gaps = 0/528 (0%) Strand=Plus/Plus Query 332810 ACCTTTTCGGCGGCGACAATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGC 332869 ||||| ||||| ||| |||| ||| || | ||| || ||||| ||||| Sbjct 5309059 ACCTTCTCGGCCTCGATGATCTGCATCAGACGCTTGACGACCTGCGCGTCCGTGAGCTTG 5309118 Query 332870 ACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTG 332929 || | |||||||| || || | |||||| | |||||||| | | ||| |||| Sbjct 5309119 GCATACCGCAGGATAGCGCACCTCGACTGCAGCGGCTCGATGATCTTGTTGGACTGGTTG 5309178 Query 332930 CAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGT 332989 || || | |||||||||||||| || | | | ||||| ||| ||| || ||||| Sbjct 5309179 CACGCGAACGCAAACCGCGTCGTGTTCGAGTAGATCTCCATCGTCCGCCGCAGCGCCTGC 5309238 Query 332990 TGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGC 333049 || || ||| ||| | || ||| |||||||| ||||||| || |||||| |||||| Sbjct 5309239 TGCGCGCCCGACGTCATGCTGTCCGCCTCGTCCAGGATGACGAGCTTGTGCCGCCCGGCG 5309298 Query 333050 GGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCG 333109 ||||| ||| | ||| ||| | |||||| || ||||||||||| | |||| Sbjct 5309299 GGCAGCGTGACCTTCTTCTGCGCGAAGCCCTTGATGCGGTTCCGCACGACGTCGATGCCG 5309358 Query 333110 CGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACG 333169 |||||||| |||||||| || ||||||||||| | | | | |||| | Sbjct 5309359 CGCTCGTCGCTGGCGTTGAGCTCCAGCACGGCCTCCTTGTACGAGTCGCCCAGCATCTGC 5309418 Query 333170 CGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGG 333229 |||||||||||| | |||||| |||||||| |||| ||| |||| | | || | Sbjct 5309419 CGCGCCAGGCACAGCACGCTCGTCGTCTTGCCGATGCCCGGCATGCCCGAGATGATGACG 5309478 Query 333230 TTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCG 333289 | ||||| || || || || | |||||| | | | | | ||||||| Sbjct 5309479 TGTGGCATATTCCCCTCTCTTGCGATGATCTTGAGTCGCTCGATCGTTTCCGTGTTGCCG 5309538 Query 333290 ACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGATCCATGGGAGG 333337 || | ||||||||| | | ||| ||||||||||| | || | ||||| Sbjct 5309539 ACGACGTCGTCGAGGAAGACTGGCCGGTACTTTTCCACCCTTCGGAGG 5309586 Score = 174 bits (192), Expect = 2e-37 Identities = 247/342 (72%), Gaps = 13/342 (4%) Strand=Plus/Minus Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831 || ||| ||| | |||||| || |||||||||||||| |||||||||||||||||| | | Sbjct 4691339 GCAGATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCTTTTTGGACCGCCGAGGAGATTG 4691281 Query 1455832 ACCTCGGCGCCGA----CACGGTCCACTGGGTG--TCGC-TGAGCGACGACGAGCGCCAT 1455884 | ||| | || |||| ||||| |||| | | |||||| ||| | Sbjct 4691280 ATCTCTCCAAGGATCTCCACG----ACTGGAACAATCGCATCAACGACGATGAGAAGTAC 4691225 Query 1455885 TTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCT 1455944 |||||| ||| |||||||||| || ||||||| || |||||||| ||||||||| Sbjct 4691224 TTCATCTCTCACATCCTCGCCTTCTT-CGCCGCCTCGGACGGCATCGTCAACGAGAACCT 4691166 Query 1455945 GGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCA 1456004 | | ||||| | |||||||| | || ||||| || | || ||||| ||||| Sbjct 4691165 CGTTGAGCGCTTCAGCGGCGAGGTCCAGATTCCTGAGGCCCGCTGCTTCTACGGCTTCCA 4691106 Query 1456005 GATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAA 1456064 |||| || || ||||||||||| || ||||||||||| || |||||||||||| |||| Sbjct 4691105 GATCATGATGGAGAACATCCACTCCGAGACCTACTCGCTGCTCATCGACACCTACATCAA 4691046 Query 1456065 GGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACAC 1456106 ||| | | | || || ||||||| ||||||||| || Sbjct 4691045 GGAGCACGCCCAGCGCGAGTACCTCTTCAACGCCATCGAGAC 4691004 Score = 129 bits (142), Expect = 8e-24 Identities = 190/264 (72%), Gaps = 4/264 (2%) Strand=Plus/Minus Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577 || |||||||| ||| || ||| ||||||| | ||||| | | |||| | || || Sbjct 4690677 AGGAGATCATCACCGACGCTGTCAGGATCGAGCAGGAGTTCCTTACCGAGGCTCTTCCCT 4690618 Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637 || || ||||||||||||||| | |||||| ||||||||||| || |||||||| Sbjct 4690617 GCGCCCTGCTCGGCATGAACGCCAAC-CTCATGAAGCAGTACATTGAGTTC-GTCGCCGA 4690560 Query 1456638 CCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCAT 1456697 ||| || |||| || || ||| || ||||| |||| | | ||||||| ||| | Sbjct 4690559 CCGTCTCCTCGTCGCCCTTGGCAACG-AGAAGATCTACAAGTCCTCCAACCCCTTCGACT 4690501 Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGT 1456756 |||||| ||||| || | |||||||||||||| |||||| ||||| | ||| | Sbjct 4690500 TCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACT 4690441 Query 1456757 ACGCCAAGGCCGGCGTCACCGCCA 1456780 || ||||| || |||| |||| Sbjct 4690440 ACCAGAAGGCTGGTGTCATGGCCA 4690417 >seq4 Length=5284358 Score = 172 bits (190), Expect = 8e-37 Identities = 343/503 (68%), Gaps = 19/503 (4%) Strand=Plus/Minus Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741 |||||||| | |||||| | ||||| | | | ||| ||||| |||| |||||| Sbjct 2050706 CACAAGGAAGAGCTCGACTCAGCCATTGTCTATGACCGTGACTTCAACTACCAGTACTTC 2050647 Query 259742 GGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGCG 259800 || | ||| || | || | || |||||| ||| | || || |||||||||| Sbjct 2050646 GGATTCAAGACGCTCGAGC-GTTCATACCTGCTCAAGCTCAACGGTAAGATCGTCGAGCG 2050588 Query 259801 GCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAA 259860 || ||| | ||| |||||||||| ||| | || | |||| |||||| Sbjct 2050587 TCCGCAGCACATGATCATGCGTGTTGCCGTCGGTA--TCTGGGG----------CGACAA 2050540 Query 259861 TGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCTCAG 259919 | |||| || ||| |||||| | |||||| ||||| ||| |||||| | Sbjct 2050539 CA---TTGAGCGTGTCATCGAGACCTACAACCTCATGTC-CAGCAAGTTCTTCACCCACG 2050484 Query 259920 CGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGT 259979 | | ||||| ||||| || || || ||||||| | ||| ||||||||||| || Sbjct 2050483 CCTCTCCCACACTCTTCAACGCTGGTACGCCGCAGGCTCAGCTGTCGTCGTGCTTCCTTG 2050424 Query 259980 TGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCA 260039 |||||||||||| || || ||||||||||| ||||| |||||| ||||| | | Sbjct 2050423 TGGACATGAAGGATGACAGCATTGAGGGCATCTACGACACCCTCAAGACCTGCGCCATGA 2050364 Query 260040 TCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCT 260099 |||||||| ||| ||||| || ||| | || ||| | || ||| ||||| ||| Sbjct 2050363 TCTCCAAGATGGCTGGCGGTATTGGTCTGAACGTCCACCGCATCCGTGCCACGGGCTCCT 2050304 Query 260100 ACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACG 260159 || | || ||||||||||| |||||||| | | |||||||| || || || ||| Sbjct 2050303 ACATTGCCGGCACCAACGGTACCTCCAACGGTATCATCCCCATGCTCCGAGTGTTCAACA 2050244 Query 260160 ACACGGCGCGCTACGTCGACCAG 260182 |||| || | ||||| |||||| Sbjct 2050243 ACACTGCCAGATACGTGGACCAG 2050221 >seq3 Length=5313354 Score = 89.7 bits (98), Expect = 7e-12 Identities = 120/163 (74%), Gaps = 7/163 (4%) Strand=Plus/Plus Query 724983 AACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC---GCCTGGCG 725039 |||| | || || | ||||| |||| ||| | | ||| |||||| || || || || Sbjct 3309776 AACTGGGTTATCCA-GACATCTTCGAGCGCGTTGCCACTGAGGCC--TCCAAGCTTGCCG 3309832 Query 725040 CGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATC 725099 | || ||||||| ||| ||| | |||| |||||||||||| | || ||||| ||| Sbjct 3309833 C-CTACAACAAGAAGTCCACCATCTCCTCGCGTGAGATCCAGACCTCTGTCCGCCTCATC 3309891 Query 725100 ATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| || || ||||||| ||||||||| || |||||||||| Sbjct 3309892 CTGCCTGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 3309934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177804255467664