Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq4 140 3e-28
seq3 107 2e-18
seq1 84.2 2e-11
>seq4
Length=5284358
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || ||| | ||| | ||| |||||| ||||||||||| ||||
Sbjct 3189607 CCACCACGCAGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAG 3189666
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || |||| || ||||||||||| ||||| || | ||||||||||| | ||
Sbjct 3189667 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGG 3189726
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||||||| ||||| ||||| | | | | |||||| || || |||
Sbjct 3189727 ATGCCCTCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGACC 3189786
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| ||||||||| |||||||| | || || || || ||||||||
Sbjct 3189787 TCCAGCGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833
Score = 120 bits (132), Expect = 3e-22
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||| || ||| | ||| || | || |||||||||||||| || ||
Sbjct 3189414 CTCCTTCTGGATGTTATAGTCGCTGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAA 3189473
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | ||||| | |||||||||| ||||| ||||| ||
Sbjct 3189474 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCA-CGT 3189532
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | |||||||||||| |||||||| | ||||| || || || |||| || || |
Sbjct 3189533 TGTCAATCGTGTCGCTCGACTCCACCTCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGA 3189592
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 3189593 CGAAGATCTGCAT 3189605
Score = 104 bits (114), Expect = 2e-17
Identities = 125/170 (74%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| |||||||||||||||| | |||||| |||| || |||||||| || || ||
Sbjct 3189870 CTCCTTCTGAATGTTGTAATCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 3189929
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| |||||||| |||| || | || |||||||||| ||||| ||| | | |
Sbjct 3189930 GATCAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTAACATT 3189989
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
| | || ||| ||| || ||||| | ||||| || || |||||||
Sbjct 3189990 GTCGATAGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCA 3190039
Score = 82.4 bits (90), Expect = 7e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||||||||||| | || || |||| || |||||||| || || ||
Sbjct 3190154 CTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 3190213
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652
|| | ||||||||||| | ||| | || |||||||||| ||||||
Sbjct 3190214 AATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTT 3190261
>seq3
Length=5313354
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| |||||||| || |||||||| |||| | ||| || | || || |||||||| ||
Sbjct 4707947 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 4708006
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
|| || |||| ||||||||||| | || | || |||||||||| |||||| |||
Sbjct 4708007 GCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 4708066
Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718
| |||| | | |||||| || |||||||| | ||||| || || ||||| | ||
Sbjct 4708067 A-CGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCCGTGAGGGT 4708125
Query 35719 TTTCACAAATATCTGCAT 35736
|| || || ||||||||
Sbjct 4708126 CTTGACGAAAATCTGCAT 4708143
>seq1
Length=7437554
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || |||||||| || | | ||| || | || || |||||||| || || || |
Sbjct 2326937 CCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 2326996
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
||| ||||||||||| | || | || |||||||||| |||||| ||| | | |
Sbjct 2326997 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 2327056
Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726
| | ||||| || || ||||| | ||||| || || ||||||| || ||||| |
Sbjct 2327057 CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 2327116
Query 35727 A 35727
|
Sbjct 2327117 A 2327117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793194285760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |