Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq4 140 3e-28 seq3 107 2e-18 seq1 84.2 2e-11 >seq4 Length=5284358 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||| | ||| | ||| |||||| ||||||||||| |||| Sbjct 3189607 CCACCACGCAGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAG 3189666 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| || ||||||||||| ||||| || | ||||||||||| | || Sbjct 3189667 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGG 3189726 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| ||||| ||||| | | | | |||||| || || ||| Sbjct 3189727 ATGCCCTCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGACC 3189786 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||||||| |||||||| | || || || || |||||||| Sbjct 3189787 TCCAGCGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || ||| | ||| || | || |||||||||||||| || || Sbjct 3189414 CTCCTTCTGGATGTTATAGTCGCTGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAA 3189473 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| | |||||||||| ||||| ||||| || Sbjct 3189474 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCA-CGT 3189532 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||||||||| |||||||| | ||||| || || || |||| || || | Sbjct 3189533 TGTCAATCGTGTCGCTCGACTCCACCTCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGA 3189592 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 3189593 CGAAGATCTGCAT 3189605 Score = 104 bits (114), Expect = 2e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||||| | |||||| |||| || |||||||| || || || Sbjct 3189870 CTCCTTCTGAATGTTGTAATCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 3189929 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| |||| || | || |||||||||| ||||| ||| | | | Sbjct 3189930 GATCAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTAACATT 3189989 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 | | || ||| ||| || ||||| | ||||| || || ||||||| Sbjct 3189990 GTCGATAGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCA 3190039 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | || || |||| || |||||||| || || || Sbjct 3190154 CTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 3190213 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 || | ||||||||||| | ||| | || |||||||||| |||||| Sbjct 3190214 AATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTT 3190261 >seq3 Length=5313354 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || |||||||| |||| | ||| || | || || |||||||| || Sbjct 4707947 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 4708006 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || |||| ||||||||||| | || | || |||||||||| |||||| ||| Sbjct 4708007 GCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 4708066 Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 | |||| | | |||||| || |||||||| | ||||| || || ||||| | || Sbjct 4708067 A-CGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCCGTGAGGGT 4708125 Query 35719 TTTCACAAATATCTGCAT 35736 || || || |||||||| Sbjct 4708126 CTTGACGAAAATCTGCAT 4708143 >seq1 Length=7437554 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| || | | ||| || | || || |||||||| || || || | Sbjct 2326937 CCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 2326996 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||||||||| | || | || |||||||||| |||||| ||| | | | Sbjct 2326997 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 2327056 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | ||||| || || ||||| | ||||| || || ||||||| || ||||| | Sbjct 2327057 CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 2327116 Query 35727 A 35727 | Sbjct 2327117 A 2327117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793194285760