Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq4 136 4e-27
seq3 125 7e-24
seq1 89.7 5e-13
>seq4
Length=5284358
Score = 136 bits (150), Expect = 4e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| |||||| || ||||| || ||||| ||||||||||||||| | |||| ||
Sbjct 3189616 AGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGA 3189675
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| || || ||||| || | ||||||||| |||||||| ||||| ||
Sbjct 3189676 CCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCC 3189735
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || ||| | ||||| || || || || || || ||
Sbjct 3189736 TTGTCCTGAATCTTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGACCTCCAGCGTG 3189795
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || ||||| || | || || ||||| || |||||
Sbjct 3189796 ATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833
Score = 107 bits (118), Expect = 2e-18
Identities = 143/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| |||||||| ||||| ||||||||||| ||| | ||| | ||| ||
Sbjct 3189853 ACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGAGAGGGTTCGGCCGTCCTCA 3189912
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| || || |||| ||||||||||| || || ||||| || || || |||
Sbjct 3189913 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGA 3189972
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || ||| | || |||||||| || || || || || ||||| ||
Sbjct 3189973 ATCTTCGACTTAACATTGTCGATAGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTG 3190032
Query 134685 CCGGTTAAAGTTTTAACGA 134703
|| || | || || ||||
Sbjct 3190033 CCCGTCAGGGTCTTGACGA 3190051
Score = 84.2 bits (92), Expect = 2e-11
Identities = 223/332 (67%), Gaps = 9/332 (3%)
Strand=Plus/Minus
Query 7654 TTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGC-GCCTCAATTGTCCTC 7712
|| || ||||| || ||||| | || ||| || || ||| | |||| |||| ||
Sbjct 2050493 TTCACCCACGCCTCTCCCACACTCTTCAACGCTGGTACGC-CGCAGGCTCAGCTGTCGTC 2050435
Query 7713 GTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA 7772
||| || | | |||| || |||||||| || ||||| ||| |||| || | ||
Sbjct 2050434 GTGCTTCCTTGTGGACATGAAGGATGACAGCATTGAGGGCATCTACGACACCCT-CAAGA 2050376
Query 7773 T-TGCGCCAATATTTCCAAATACGGC-GGCGGAATAGGTCTGAACGTAAACGACGTGCGC 7830
||||||| || ||||| | ||| ||||| || ||||||||||| || | | ||
Sbjct 2050375 CCTGCGCCATGATCTCCAAG-ATGGCTGGCGGTATTGGTCTGAACGTCCACCGCATCCGT 2050317
Query 7831 GCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTG 7890
|||| || | ||| | ||||||||| | ||| |||| | |||||| |
Sbjct 2050316 GCCACGGGCTCCTACATTGCCGGCACCAACGGTACCTCCAACGGTATCATCCCCATGCTC 2050257
Query 7891 CGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCC 7947
|| |||||||| ||| | | || | || |||||||| || ||||| || |||
Sbjct 2050256 CGAGTGTTCAACAACACTGCCAGATACGTGGACCAGGGTGGCAACAAGCGTCCTGGTGCC 2050197
Query 7948 GCTGCCATCTATTTGGAGCCGTGGCACGCGGA 7979
||||||||| | ||||| |||||| ||||
Sbjct 2050196 TTTGCCATCTACCTAGAGCCTTGGCACTCGGA 2050165
>seq3
Length=5313354
Score = 125 bits (138), Expect = 7e-24
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||||||||| || ||| ||||| || |||||||||||| | |||| |
Sbjct 4707926 AGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 4707985
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| |||||||| ||||| || || |||| |||||||| ||||| || ||||| ||
Sbjct 4707986 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCC 4708045
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | |||||||| || ||||| ||||| ||
Sbjct 4708046 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 4708105
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || || || | || || |||||||| ||||| |||
Sbjct 4708106 ATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 4708147
>seq1
Length=7437554
Score = 89.7 bits (98), Expect = 5e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || ||||||||||| | |||| | || |||||||| ||||| || ||||
Sbjct 2326937 CCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 2326996
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| |||||||| ||||| || ||||| || || || || || || ||||| ||
Sbjct 2326997 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 2327056
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||| || || || || || || || ||||| || || || | || || ||||
Sbjct 2327057 CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 2327116
Query 134704 AA 134705
||
Sbjct 2327117 AA 2327118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505397945141440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |