Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4 136 4e-27 seq3 125 7e-24 seq1 89.7 5e-13 >seq4 Length=5284358 Score = 136 bits (150), Expect = 4e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| |||||| || ||||| || ||||| ||||||||||||||| | |||| || Sbjct 3189616 AGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGA 3189675 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| || || ||||| || | ||||||||| |||||||| ||||| || Sbjct 3189676 CCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCC 3189735 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || || || ||| | ||||| || || || || || || || Sbjct 3189736 TTGTCCTGAATCTTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGACCTCCAGCGTG 3189795 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || | || || ||||| || ||||| Sbjct 3189796 ATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| |||||||| ||||| ||||||||||| ||| | ||| | ||| || Sbjct 3189853 ACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGAGAGGGTTCGGCCGTCCTCA 3189912 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || || |||| ||||||||||| || || ||||| || || || ||| Sbjct 3189913 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGA 3189972 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | || |||||||| || || || || || ||||| || Sbjct 3189973 ATCTTCGACTTAACATTGTCGATAGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTG 3190032 Query 134685 CCGGTTAAAGTTTTAACGA 134703 || || | || || |||| Sbjct 3190033 CCCGTCAGGGTCTTGACGA 3190051 Score = 84.2 bits (92), Expect = 2e-11 Identities = 223/332 (67%), Gaps = 9/332 (3%) Strand=Plus/Minus Query 7654 TTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGC-GCCTCAATTGTCCTC 7712 || || ||||| || ||||| | || ||| || || ||| | |||| |||| || Sbjct 2050493 TTCACCCACGCCTCTCCCACACTCTTCAACGCTGGTACGC-CGCAGGCTCAGCTGTCGTC 2050435 Query 7713 GTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA 7772 ||| || | | |||| || |||||||| || ||||| ||| |||| || | || Sbjct 2050434 GTGCTTCCTTGTGGACATGAAGGATGACAGCATTGAGGGCATCTACGACACCCT-CAAGA 2050376 Query 7773 T-TGCGCCAATATTTCCAAATACGGC-GGCGGAATAGGTCTGAACGTAAACGACGTGCGC 7830 ||||||| || ||||| | ||| ||||| || ||||||||||| || | | || Sbjct 2050375 CCTGCGCCATGATCTCCAAG-ATGGCTGGCGGTATTGGTCTGAACGTCCACCGCATCCGT 2050317 Query 7831 GCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTG 7890 |||| || | ||| | ||||||||| | ||| |||| | |||||| | Sbjct 2050316 GCCACGGGCTCCTACATTGCCGGCACCAACGGTACCTCCAACGGTATCATCCCCATGCTC 2050257 Query 7891 CGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCC 7947 || |||||||| ||| | | || | || |||||||| || ||||| || ||| Sbjct 2050256 CGAGTGTTCAACAACACTGCCAGATACGTGGACCAGGGTGGCAACAAGCGTCCTGGTGCC 2050197 Query 7948 GCTGCCATCTATTTGGAGCCGTGGCACGCGGA 7979 ||||||||| | ||||| |||||| |||| Sbjct 2050196 TTTGCCATCTACCTAGAGCCTTGGCACTCGGA 2050165 >seq3 Length=5313354 Score = 125 bits (138), Expect = 7e-24 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| || ||| ||||| || |||||||||||| | |||| | Sbjct 4707926 AGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 4707985 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| ||||| || || |||| |||||||| ||||| || ||||| || Sbjct 4707986 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCC 4708045 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | |||||||| || ||||| ||||| || Sbjct 4708046 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 4708105 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || || || | || || |||||||| ||||| ||| Sbjct 4708106 ATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 4708147 >seq1 Length=7437554 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || ||||||||||| | |||| | || |||||||| ||||| || |||| Sbjct 2326937 CCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 2326996 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| |||||||| ||||| || ||||| || || || || || || ||||| || Sbjct 2326997 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 2327056 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||| || || || || || || || ||||| || || || | || || |||| Sbjct 2327057 CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 2327116 Query 134704 AA 134705 || Sbjct 2327117 AA 2327118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397945141440