Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 3e-28
seq4 132 1e-25
>seq1
Length=7437554
Score = 141 bits (156), Expect = 3e-28
Identities = 323/481 (67%), Gaps = 4/481 (1%)
Strand=Plus/Plus
Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678
|| || || ||||| || || || |||||||| || || || || || || ||||
Sbjct 1690927 ACCGTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAAGGACGCCGGTCTCATT 1690986
Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738
|| || | || || || | || || || || |||||||| || || || || || ||
Sbjct 1690987 GCCGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACTGCCGCTGCCATCGCCTACGGT 1691046
Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798
|| || || | || ||| || || | || ||||| || | |||||||||||
Sbjct 1691047 CTCGACAAGAAGATTGAGGGCGAGCGTAACGTCCTGATTTTCGACCTCGGTGGTGGTACC 1691106
Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858
|| ||||| || || || || |||| ||||| || || || || || | || || |||
Sbjct 1691107 TTCGATGTCTCCCTCCTTACCATTGAGGAGGGTATCTTCGAGGTCAAGTCCACCGCCGGT 1691166
Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918
|| || ||||| ||||| || || || || || || ||||| || || | | || ||
Sbjct 1691167 GACACTCATCTGGGTGGTGAGGACTTCGACAACCGCCTCGTGTCTCACCTCGCAAATGAG 1691226
Query 349919 TTTAAGCGTCAAG-CTAAAATTGATATTGGAGA-TAATCCTAGAGCAATGCGTCGCCTAA 349976
|| || || |||| | || | ||| || || ||| || | || ||||||| ||
Sbjct 1691227 TTCAAACG-CAAGACCAAGAAGGAT-CTGACGACCAATGCTCGCGCCCTGCGTCGTCTTC 1691284
Query 349977 GAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAA 350036
| ||||| || || ||||| ||||| | | || || || | || ||||| || || |
Sbjct 1691285 GCACTGCTTGCGAGCGTGCCAAGCGAACTCTGTCCTCCTCTGCTCAGACCTCGATCGAGA 1691344
Query 350037 TTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAG 350096
|||| ||||| || || | || |||| | ||||| || |||||||| || || |
Sbjct 1691345 TTGACTCTCTCTTCGAGGGTATCGACTTCTACACGTCTATCACCCGTGCTCGTTTCGAGG 1691404
Query 350097 A 350097
|
Sbjct 1691405 A 1691405
>seq4
Length=5284358
Score = 132 bits (146), Expect = 1e-25
Identities = 170/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || ||||| || || ||||| || ||||| || || ||
Sbjct 3189603 CATACCACCACGCAGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTC 3189662
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || || || || || || ||||||||||| ||||| ||||| || ||
Sbjct 3189663 GGAGAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGG 3189722
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
|| || || || || |||||||| || ||| || ||||| || |||| ||||||| |
Sbjct 3189723 CGGGATGCCCTCCTTGTCCTGAATCTT-GCTCTTCACATTGTCGATCGTGTCAGATGACT 3189781
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || || || || | ||||| || || || || || || || ||||||||
Sbjct 3189782 CGACCTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833
Score = 125 bits (138), Expect = 2e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || ||||| || ||||| || ||||| || |||||
Sbjct 3189831 CATACCACCACGAAGGCGGAGGACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATC 3189890
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | ||||| || || ||||| || || ||||| ||||| || || |||||||| ||
Sbjct 3189891 GGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGG 3189950
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || |||||||| || | || ||||| || || | ||| || | ||
Sbjct 3189951 GGGGATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATAGTATCGGACGACTC 3190010
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
|| ||||| || | ||||| || || || || || ||
Sbjct 3190011 GACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 3190049
Score = 122 bits (134), Expect = 3e-22
Identities = 170/236 (72%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||||| || ||||| | | || |||||||| || |||||||| || || || ||||
Sbjct 3189371 TTTACTGGCCGCCACGAAGACGAAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTAT 3189430
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || | || || ||||| || || || || ||||| ||||| ||||| ||||| |
Sbjct 3189431 AGTCGCTGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGT 3189490
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681
|||||||||| || || || |||||||| || ||| || || || ||||||| ||
Sbjct 3189491 CAGGAGGAATACCCTCCTTGTCCTGAATCTT-GCTCTTCACGTTGTCAATCGTGTCGCTC 3189549
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || || || || || | ||||| ||||| || || || || || ||||||||
Sbjct 3189550 GACTCCACCTCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3189605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515253002177816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |