Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq4 300 2e-76 seq3 136 4e-27 >seq4 Length=5284358 Score = 300 bits (332), Expect = 2e-76 Identities = 524/755 (69%), Gaps = 8/755 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || ||| | |||||| || ||| || ||||||| ||||| ||| Sbjct 2050573 TCATGCGTGTTGCCGTCGGTATCTGGGGCGACAACATTGAGCGTGTCATCGAGACCTACA 2050514 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 || | ||| | |||| ||| || |||||| | || || || ||||||||||||||| Sbjct 2050513 ACCTCATGTCCAGCAAGTTCTTCACCCACGCCTCTCCCACACTCTTCAACGCTGGTACGC 2050454 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 || ||||| ||||| |||||||| |||| |||||||||||| || || |||| Sbjct 2050453 CGCAGGCTCAGCTGTCGTCGTGCTTCCTTGTGGACATGAAGGATGACAGCATTGAGGGCA 2050394 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| || |||||| || ||| ||||||||| | | || ||||| ||| | Sbjct 2050393 TCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGATGGCTGGCGGTATTGGTCTGA 2050334 Query 53433 ACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || || | || ||||||| | ||| | || || || ||||| | || | Sbjct 2050333 ACG--TCCACCGCATCCGTGCCACGGGCTCCTACATTGCCGGCACCAACGGTACCTCCAA 2050276 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || ||| | || |||||||| || ||||||||||| ||| | ||||| |||||||||| Sbjct 2050275 CGGTATCATCCCCATGCTCCGAGTGTTCAACAACACTGCCAGATACGTGGACCAGGGTGG 2050216 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 ||||| || | || ||||||||||| ||||| |||||| | || | | || Sbjct 2050215 CAACAAGCGTCCTGGTGCCTTTGCCATCTACCTAGAGCCTTGGCACTCGGATGTCTTCGA 2050156 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670 ||| ||||| || || ||| || || | || ||| ||||| |||||||| || Sbjct 2050155 GTTCCTCGACCTCCGCAAGAACCACGGAAAGGAGGAGGTGCGCGCTCGTGACCTCTTCCT 2050096 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730 || || ||||| || || ||||||||| | ||||||||| ||| |||||| ||| Sbjct 2050095 CGCCCTCTGGATCCCCGATCTCTTCATGAAGCGTGTGGAGAAGAACGGCGAGTGGACCCT 2050036 Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACGAGA 53789 |||||||| ||||||||||| ||||| | | || ||||||||||||||| | | Sbjct 2050035 CATGTGCCCTAACGAGTGCCCTGGCCTTGCCGACTG-CTACGGTGAGGAGTTCGAGGCTC 2049977 Query 53790 TGTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTA 53848 |||| || ||||| || | |||| ||| |||| | || || | || | Sbjct 2049976 TGTACGAGAAGTACG-AGCGCGAGGGTCGCGGTCGCAAGACGATCCGCGCCCAGAAGCTC 2049918 Query 53849 TGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGAT 53908 ||| | | |||||| || |||| ||||| || | || | |||| |||||||||| Sbjct 2049917 TGGTACTCCATCCTCGAGGCCCAGACTGAGACTGGCAACCCCTTCATGCTCTACAAGGAT 2049858 Query 53909 TCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 | |||| |||||||||||||||||| |||| Sbjct 2049857 GCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 2049823 Score = 118 bits (130), Expect = 1e-21 Identities = 302/453 (67%), Gaps = 19/453 (4%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| |||||||| || || ||||| || || || | ||||| | |||||| Sbjct 2049302 CGCAACTCTCTGCTCGTTGCCCCCATGCCCACTGCCAGCACTTCGCAGATTCTTGGCAAC 2049243 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| |||||||| ||||| |||||||||||| ||| || ||| || || ||| Sbjct 2049242 AACGAGTGCTTCGAGCCCTACACCTCCAACATCTACCAGCGTCGTGTCCTGGCTGGCGAG 2049183 Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663 || | ||||| || |||||||||| || | ||| | | Sbjct 2049182 TTCCAGGTCGTCAACCCTTGGCTGCTCAAGGACCTCGTCGAGCTTGGTCTCTGGT--CTG 2049125 Query 55664 CAG--ATCAAGAC--GGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGG---AGA 55715 | || |||| |||| |||| |||||| ||| ||||||| | | | Sbjct 2049124 ATGGCATGAAGAACAGGATCATTGCCGAGAACGGC---TCCATCCAGAACATCCCCAACA 2049068 Query 55716 TTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGA 55775 | ||| | |||||| | ||| ||| |||||||||||| | ||| | | | Sbjct 2049067 TCCCTGATGATGTCAAGGCTCTGTACAAGACCGTGTGGGAGATTTCTCAGC---GCCAGG 2049011 Query 55776 TTGAC---ATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCT 55832 ||| | ||| ||| ||||||||||| | ||| || ||||||||||| || |||||| Sbjct 2049010 TTGTCCAGATGGCTGCCGATCGTGGTGCCTTCATTGATCAGTCCCAGTCCCTCAACATCC 2048951 Query 55833 TCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGG 55892 |||| || |||| || ||| |||| | | | ||||||||| || |||||| | Sbjct 2048950 ACATGAAGGATCCCTCTATGGGCAAGATCACCAGCATGCACTTTGCTGGCTGGAAGCTTG 2048891 Query 55893 GACTCAAGACGGGTATGTACTATCTGCGGACCC 55925 | |||||||| || |||||||| || || |||| Sbjct 2048890 GTCTCAAGACCGGCATGTACTACCTCCGTACCC 2048858 >seq3 Length=5313354 Score = 136 bits (150), Expect = 4e-27 Identities = 216/305 (71%), Gaps = 6/305 (2%) Strand=Plus/Plus Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358 || |||||||| || ||||| | ||| || ||||| ||||||||||| || | |||| Sbjct 1695351 AGACGAGTGAAGATATAACGCGGGCTAGCCGCATCAGAACCACCAGCAAGTCGGGAACCG 1695410 Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418 || | || || |||||||||| ||||| |||||| | ||| || ||| ||||| | | Sbjct 1695411 AAGTTACCGCTGGGCTCCAAGATGTTCACGTTGTTCGAGCCAACGAAGACCTGAGCAAGG 1695470 Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478 | || || || || || || ||||| ||||| || || || | || Sbjct 1695471 CCAATGATTGTCTGCTGAAGAGAAATTTCGCCGTGGTGGTACGCTGTTTGTTCAGAGACA 1695530 Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536 ||||| | || || ||| |||||| |||| |||| ||||||| ||||| || || | Sbjct 1695531 TAGCCAGACAACTCAGCAACCTTCTTGTCCTTGAC--CAGGTTCCGCTTGAAACAAGCGT 1695588 Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTG-AGGGATCGAACGCTTG 117595 | || ||||| ||||||| |||||||| || | || || || |||||| |||||| || Sbjct 1695589 ACATGACCTTTCGCTGACCAGGCTTCAGGCCGT-CGACAATTGAAGGGATGGAACGCATG 1695647 Query 117596 ATGTC 117600 |||| Sbjct 1695648 TTGTC 1695652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215507505600