Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 1e-25
>seq1
Length=7437554
Score = 131 bits (144), Expect = 1e-25
Identities = 191/265 (72%), Gaps = 5/265 (2%)
Strand=Plus/Minus
Query 29782 GAAATCCTCTGCCTTAAAGTCGTCCAGGCTC--TCCACCCTCC-TGTTTATCCTCAGTGT 29838
||||||||| ||| | |||| | |||| ||| ||||| | | ||| |||
Sbjct 5295062 GAAATCCTCCATCTTCCACCCGTCGATGCTCCCTCCCGCCTCCCTCGTAATCTCCAGCAC 5295003
Query 29839 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTA 29898
||| ||| | |||||| | ||| ||||| |||| |||| || |||| || |||
Sbjct 5295002 GGGGAAGTCCCGGGGCTCGCGCTCCAGCTGCGTCTCGAGCGCCTCGACGTGGTCGCAGTA 5294943
Query 29899 GACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29957
|||||| ||||| |||| | ||| | || || ||||| | ||| || |||||| |
Sbjct 5294942 GACGTGGGCGTCGCCCATGACGTGCGTCAGGCTG-CCCGGCACGAGCTCGCAGACGTGCG 5294884
Query 29958 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 30017
| ||||||| ||||||||| | |||||| |||||||| ||||| || ||||| |||||||
Sbjct 5294883 CGATCATGTGCGTGAGGAGCGCGTAGCTCGCGATGTTGAAGGGGACGCCGAGGCCCATGT 5294824
Query 30018 CCCCCGACCTCTGGTAGAGCTGACA 30042
| | || | |||||||||||| ||
Sbjct 5294823 CGCAGGAGCGCTGGTAGAGCTGGCA 5294799
Score = 105 bits (116), Expect = 5e-18
Identities = 191/274 (70%), Gaps = 8/274 (3%)
Strand=Plus/Minus
Query 30187 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 30246
|||||| || || ||| |||| ||||| | | || || |||||| || || ||
Sbjct 5294567 CAGCTGGTCGACGCCCTGACCCGTATAGTCCGTCTTCGCATCGACGTACTCGGCGCCAAA 5294508
Query 30247 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30306
|||| |||||||||||||||||| || |||||||| ||| | ||||||||| || |||
Sbjct 5294507 GTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCACCTCCCTGTGCGAGAGGCC 5294448
Query 30307 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA--CCCCCTTCTCA 30364
| |||||| || || | || |||||| |||||||||| | ||| | || |
Sbjct 5294447 CACGCTGTCCAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATGCGCACGCCCGCGTCGCT 5294388
Query 30365 GAGAGC--TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30422
||| || | | || | ||| |||| || |||||| || ||||| | | |||||
Sbjct 5294387 GAGGGCGAGCGACGACGTGT-TGG--CCTC-GATGAACCAGAGGAGCTCGGCGAGGACGG 5294332
Query 30423 CCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456
| ||||| | ||| ||||||||||||||
Sbjct 5294331 CGCGGGTGAAGACGCGCTTCGTCGTGAGGAGGGG 5294298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310043462624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |