Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1 131 1e-25 >seq1 Length=7437554 Score = 131 bits (144), Expect = 1e-25 Identities = 191/265 (72%), Gaps = 5/265 (2%) Strand=Plus/Minus Query 29782 GAAATCCTCTGCCTTAAAGTCGTCCAGGCTC--TCCACCCTCC-TGTTTATCCTCAGTGT 29838 ||||||||| ||| | |||| | |||| ||| ||||| | | ||| ||| Sbjct 5295062 GAAATCCTCCATCTTCCACCCGTCGATGCTCCCTCCCGCCTCCCTCGTAATCTCCAGCAC 5295003 Query 29839 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTA 29898 ||| ||| | |||||| | ||| ||||| |||| |||| || |||| || ||| Sbjct 5295002 GGGGAAGTCCCGGGGCTCGCGCTCCAGCTGCGTCTCGAGCGCCTCGACGTGGTCGCAGTA 5294943 Query 29899 GACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29957 |||||| ||||| |||| | ||| | || || ||||| | ||| || |||||| | Sbjct 5294942 GACGTGGGCGTCGCCCATGACGTGCGTCAGGCTG-CCCGGCACGAGCTCGCAGACGTGCG 5294884 Query 29958 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 30017 | ||||||| ||||||||| | |||||| |||||||| ||||| || ||||| ||||||| Sbjct 5294883 CGATCATGTGCGTGAGGAGCGCGTAGCTCGCGATGTTGAAGGGGACGCCGAGGCCCATGT 5294824 Query 30018 CCCCCGACCTCTGGTAGAGCTGACA 30042 | | || | |||||||||||| || Sbjct 5294823 CGCAGGAGCGCTGGTAGAGCTGGCA 5294799 Score = 105 bits (116), Expect = 5e-18 Identities = 191/274 (70%), Gaps = 8/274 (3%) Strand=Plus/Minus Query 30187 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 30246 |||||| || || ||| |||| ||||| | | || || |||||| || || || Sbjct 5294567 CAGCTGGTCGACGCCCTGACCCGTATAGTCCGTCTTCGCATCGACGTACTCGGCGCCAAA 5294508 Query 30247 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30306 |||| |||||||||||||||||| || |||||||| ||| | ||||||||| || ||| Sbjct 5294507 GTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCACCTCCCTGTGCGAGAGGCC 5294448 Query 30307 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA--CCCCCTTCTCA 30364 | |||||| || || | || |||||| |||||||||| | ||| | || | Sbjct 5294447 CACGCTGTCCAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATGCGCACGCCCGCGTCGCT 5294388 Query 30365 GAGAGC--TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30422 ||| || | | || | ||| |||| || |||||| || ||||| | | ||||| Sbjct 5294387 GAGGGCGAGCGACGACGTGT-TGG--CCTC-GATGAACCAGAGGAGCTCGGCGAGGACGG 5294332 Query 30423 CCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | ||||| | ||| |||||||||||||| Sbjct 5294331 CGCGGGTGAAGACGCGCTTCGTCGTGAGGAGGGG 5294298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310043462624