Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 9e-14 seq3 84.2 1e-11 >seq4 Length=5284358 Score = 91.5 bits (100), Expect = 9e-14 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||| | ||| || || |||||| |||||||| || || || || || || Sbjct 3189616 AGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGA 3189675 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || ||||| ||||| || | |||||| ||||| ||||| | |||||| Sbjct 3189676 CCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCC 3189735 Query 34609 TTGTC 34613 ||||| Sbjct 3189736 TTGTC 3189740 Score = 86.0 bits (94), Expect = 4e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | |||||| | || | |||||| || |||||| || |||||||| || Sbjct 3189378 GCCGCCACGAAGACGAAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTATAGTCGCT 3189437 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || || || ||||| || || || | |||||| ||||| || || Sbjct 3189438 GAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 3189497 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCC 34656 | ||||||||||| ||| || | || ||| | ||| ||||| ||| |||| Sbjct 3189498 AATACCCTCCTTGTC-CTGAATCTTGCTCTTCACGTTGTCAATCGTGTCGCTCG-ACTCC 3189555 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | ||| || || || ||||| | || || || || |||||||| Sbjct 3189556 ACCTCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3189605 >seq3 Length=5313354 Score = 84.2 bits (92), Expect = 1e-11 Identities = 145/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||||||||||| || ||||| || || || || || || | || || || || Sbjct 4707941 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGC 4708000 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | ||||| ||||| || || | ||||||||||| |||| || Sbjct 4708001 TTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATC-TT 4708059 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | || ||||| |||||| || | ||| || || || || || Sbjct 4708060 GGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCCGT 4708119 Query 34683 TAACGTTTTCACAAAAATCTGCATGTTG 34710 | || || || ||||||||||| ||| Sbjct 4708120 GAGGGTCTTGACGAAAATCTGCATCTTG 4708147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729323824776