Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 4e-26
>seq1
Length=7437554
Score = 132 bits (146), Expect = 4e-26
Identities = 210/293 (72%), Gaps = 10/293 (3%)
Strand=Plus/Plus
Query 34331 ATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTC---GG 34387
|||||||||| |||| || || || || ||||||| ||| ||| || || | ||
Sbjct 5294406 ATCTGGGACGGCAACGGCTCGCGCGAGTTCCTGGACA-GCGTGGG--CCTCTCGCACAGG 5294462
Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447
|||| ||||||| ||||||| || ||||||||||||||| | |||||||| || |||||
Sbjct 5294463 GAGGTGGGCGACCTGGGCCCCGTGTACGGGTTCCAGTGGCGGCACTTTGGCGCCGAGTA- 5294521
Query 34448 CGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGAT-CG 34505
|| | |||||| |||||||| |||| ||||| | ||||||||| | ||| | ||
Sbjct 5294522 CGTCGATGCGAAGACGGACTATACGGGTCAGGGCGTCGACCAGCTGGCCGAGGTGGTGCG 5294581
Query 34506 ACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGG 34565
| | || | || || | || || ||||| | ||| ||||||||||| ||
Sbjct 5294582 GAAGC-TGCGGACGAGTCCGTACGATAGGCGGATCATCCTGTCGGCGTGGAACCCCGCGG 5294640
Query 34566 ATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC 34618
|||| ||||||||| || |||||||||| || || |||||||||
Sbjct 5294641 ATCTGAAGAAGATGGCGCTGCCGCCGTGCCACATGTTCGCACAGTTCTACGTC 5294693
Score = 132 bits (146), Expect = 4e-26
Identities = 210/293 (72%), Gaps = 10/293 (3%)
Strand=Plus/Minus
Query 6727 GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786
||||||||| || || |||||||||| || ||||||||| |||||| ||
Sbjct 5294693 GACGTAGAACTGTGCGAACATGTGGCACGGCGGCAGCGCCATCTTCTTCAGATCCGCGGG 5294634
Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCG-ATCA 6845
||||||||| ||| | ||||| || || | || || | || | | || | ||
Sbjct 5294633 GTTCCACGCCGACAGGATGATCCGCCTATCGTACGGACTCGTCCGCA-GCTTCCGCACCA 5294575
Query 6846 CGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCC 6904
| | ||||||||| | ||||| |||| |||||||| |||||| | || |||||
Sbjct 5294574 CCTCGGCCAGCTGGTCGACGCCCTGACCCGTATAGTCCGTCTTCGCATCGACG-TACTCG 5294516
Query 6905 GCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCC---GA 6961
|| |||||||| | ||||||||||||||| || ||||||| ||||||| |||||| |
Sbjct 5294515 GCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCACCTCCCTGTGC 5294456
Query 6962 GATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGAT 7014
|| || ||| ||| ||||||| || || || || |||| ||||||||||
Sbjct 5294455 GAGAGG--CCCACGC-TGTCCAGGAACTCGCGCGAGCCGTTGCCGTCCCAGAT 5294406
Score = 98.7 bits (108), Expect = 9e-16
Identities = 157/221 (71%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695
|||||||||||| || || || | |||||||| | || || || |||||||| || ||
Sbjct 5294798 CTGCCAGCTCTACCAGCGCTCCTGCGACATGGGCCTCGGCGTCCCCTTCAACATCGCGAG 5294857
Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAG-CTGG 34754
||||| || |||||| |||||||||| || ||| | | | || || ||| || |||
Sbjct 5294858 CTACGCGCTCCTCACGCACATGATCGCGCACGTCTGCGAGCTCGTGCC-GGGCAGCCTGA 5294916
Query 34755 TGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCA 34812
|| |||| |||| || || || ||||| ||||| ||||| |||| || ||
Sbjct 5294917 CGC--ACGTCATGGGCGACGCCCACGTCTACTGCGACCACGTCGAGGCGCTCGAGACGCA 5294974
Query 34813 GCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTA 34853
|||| | || |||||||| |||||| ||| | ||||
Sbjct 5294975 GCTGGAGCGCGAGCCCCGGGACTTCCCCGTGCTGGAGATTA 5295015
Score = 98.7 bits (108), Expect = 9e-16
Identities = 157/221 (71%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 6492 TAATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGA 6551
|||| | ||| |||||| |||||||| || | |||||| || |||| |||||
Sbjct 5295015 TAATCTCCAGCACGGGGAAGTCCCGGGGCTCGCGCTCCAGCTGCGTCTCGAGCGCCTCGA 5294956
Query 6552 TGTGGTTCAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAG-CTCCCCAGGAACCA 6608
||||| ||||| || || || |||| |||| || ||| || ||| || || |
Sbjct 5294955 CGTGGTCGCAGTAGACGTGGGCGTCGCCCATGACGT--GCGTCAGGCTGCCC-GGCACGA 5294899
Query 6609 ACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCA 6668
| | ||| || |||||||||| |||||| || ||||| || || |||||||| || |
Sbjct 5294898 GCTCGCAGACGTGCGCGATCATGTGCGTGAGGAGCGCGTAGCTCGCGATGTTGAAGGGGA 5294839
Query 6669 CCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709
| || | |||||||| | || || || ||||||||||||
Sbjct 5294838 CGCCGAGGCCCATGTCGCAGGAGCGCTGGTAGAGCTGGCAG 5294798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448261996563840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |