Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1 132 4e-26 >seq1 Length=7437554 Score = 132 bits (146), Expect = 4e-26 Identities = 210/293 (72%), Gaps = 10/293 (3%) Strand=Plus/Plus Query 34331 ATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTC---GG 34387 |||||||||| |||| || || || || ||||||| ||| ||| || || | || Sbjct 5294406 ATCTGGGACGGCAACGGCTCGCGCGAGTTCCTGGACA-GCGTGGG--CCTCTCGCACAGG 5294462 Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447 |||| ||||||| ||||||| || ||||||||||||||| | |||||||| || ||||| Sbjct 5294463 GAGGTGGGCGACCTGGGCCCCGTGTACGGGTTCCAGTGGCGGCACTTTGGCGCCGAGTA- 5294521 Query 34448 CGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGAT-CG 34505 || | |||||| |||||||| |||| ||||| | ||||||||| | ||| | || Sbjct 5294522 CGTCGATGCGAAGACGGACTATACGGGTCAGGGCGTCGACCAGCTGGCCGAGGTGGTGCG 5294581 Query 34506 ACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGG 34565 | | || | || || | || || ||||| | ||| ||||||||||| || Sbjct 5294582 GAAGC-TGCGGACGAGTCCGTACGATAGGCGGATCATCCTGTCGGCGTGGAACCCCGCGG 5294640 Query 34566 ATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC 34618 |||| ||||||||| || |||||||||| || || ||||||||| Sbjct 5294641 ATCTGAAGAAGATGGCGCTGCCGCCGTGCCACATGTTCGCACAGTTCTACGTC 5294693 Score = 132 bits (146), Expect = 4e-26 Identities = 210/293 (72%), Gaps = 10/293 (3%) Strand=Plus/Minus Query 6727 GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786 ||||||||| || || |||||||||| || ||||||||| |||||| || Sbjct 5294693 GACGTAGAACTGTGCGAACATGTGGCACGGCGGCAGCGCCATCTTCTTCAGATCCGCGGG 5294634 Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCG-ATCA 6845 ||||||||| ||| | ||||| || || | || || | || | | || | || Sbjct 5294633 GTTCCACGCCGACAGGATGATCCGCCTATCGTACGGACTCGTCCGCA-GCTTCCGCACCA 5294575 Query 6846 CGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCC 6904 | | ||||||||| | ||||| |||| |||||||| |||||| | || ||||| Sbjct 5294574 CCTCGGCCAGCTGGTCGACGCCCTGACCCGTATAGTCCGTCTTCGCATCGACG-TACTCG 5294516 Query 6905 GCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCC---GA 6961 || |||||||| | ||||||||||||||| || ||||||| ||||||| |||||| | Sbjct 5294515 GCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCACCTCCCTGTGC 5294456 Query 6962 GATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGAT 7014 || || ||| ||| ||||||| || || || || |||| |||||||||| Sbjct 5294455 GAGAGG--CCCACGC-TGTCCAGGAACTCGCGCGAGCCGTTGCCGTCCCAGAT 5294406 Score = 98.7 bits (108), Expect = 9e-16 Identities = 157/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || || | |||||||| | || || || |||||||| || || Sbjct 5294798 CTGCCAGCTCTACCAGCGCTCCTGCGACATGGGCCTCGGCGTCCCCTTCAACATCGCGAG 5294857 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAG-CTGG 34754 ||||| || |||||| |||||||||| || ||| | | | || || ||| || ||| Sbjct 5294858 CTACGCGCTCCTCACGCACATGATCGCGCACGTCTGCGAGCTCGTGCC-GGGCAGCCTGA 5294916 Query 34755 TGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCA 34812 || |||| |||| || || || ||||| ||||| ||||| |||| || || Sbjct 5294917 CGC--ACGTCATGGGCGACGCCCACGTCTACTGCGACCACGTCGAGGCGCTCGAGACGCA 5294974 Query 34813 GCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTA 34853 |||| | || |||||||| |||||| ||| | |||| Sbjct 5294975 GCTGGAGCGCGAGCCCCGGGACTTCCCCGTGCTGGAGATTA 5295015 Score = 98.7 bits (108), Expect = 9e-16 Identities = 157/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 6492 TAATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGA 6551 |||| | ||| |||||| |||||||| || | |||||| || |||| ||||| Sbjct 5295015 TAATCTCCAGCACGGGGAAGTCCCGGGGCTCGCGCTCCAGCTGCGTCTCGAGCGCCTCGA 5294956 Query 6552 TGTGGTTCAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAG-CTCCCCAGGAACCA 6608 ||||| ||||| || || || |||| |||| || ||| || ||| || || | Sbjct 5294955 CGTGGTCGCAGTAGACGTGGGCGTCGCCCATGACGT--GCGTCAGGCTGCCC-GGCACGA 5294899 Query 6609 ACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCA 6668 | | ||| || |||||||||| |||||| || ||||| || || |||||||| || | Sbjct 5294898 GCTCGCAGACGTGCGCGATCATGTGCGTGAGGAGCGCGTAGCTCGCGATGTTGAAGGGGA 5294839 Query 6669 CCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 | || | |||||||| | || || || |||||||||||| Sbjct 5294838 CGCCGAGGCCCATGTCGCAGGAGCGCTGGTAGAGCTGGCAG 5294798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261996563840