Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq3 167 5e-36
seq4 163 7e-35
seq1 134 3e-26
>seq3
Length=5313354
Score = 167 bits (184), Expect = 5e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || ||| ||| || |||||||| || || | ||||| | |||||
Sbjct 4707932 AGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 4707991
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| ||||| || ||||| || || | || |||||||||
Sbjct 4707992 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 4708051
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||||||||| || || |||||||| ||||| |||
Sbjct 4708052 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 4708111
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| |||||||| ||||| || || | |||||| ||
Sbjct 4708112 TTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 4708146
>seq4
Length=5284358
Score = 163 bits (180), Expect = 7e-35
Identities = 172/225 (76%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct 3189384 ACGAAGACGAAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTATAGTCGCTGAGGGT 3189443
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| ||||||||||| || ||||||||||| || || ||||||||||||| ||
Sbjct 3189444 GCGACCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACC 3189503
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTC 211069
||||||||||| ||||| |||||||| || || ||||| ||| || |||||
Sbjct 3189504 CTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCAATCGTGTC---GCTCGACTCCACCTC 3189560
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| || || || ||||| || || | ||||||
Sbjct 3189561 TAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3189605
Score = 158 bits (174), Expect = 3e-33
Identities = 149/190 (78%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || |||||||| || |||||||| ||||| | ||| || | || ||
Sbjct 3190134 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCGTCC 3190193
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||| || ||||| || ||||| ||||| | || |||||||||
Sbjct 3190194 TCAAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 3190253
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||| || || ||| || |||||||| ||||| |||
Sbjct 3190254 TGGATCTTCGACTTGACGTTGTCGATAGTATCCGAGGACTCGACCTCGAGGGTGATGGTC 3190313
Query 211083 TTTCCCGTGA 211092
|| || ||||
Sbjct 3190314 TTGCCAGTGA 3190323
Score = 145 bits (160), Expect = 2e-29
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| |||||||| |||||||| || || ||||| ||||| | |||||
Sbjct 3189840 ACGAAGGCGGAGGACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGAGAGGGT 3189899
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || ||||||||||| |||||||| ||||| || || || || || | ||
Sbjct 3189900 TCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGGATGCC 3189959
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||| ||||| || || || ||||| || || || || ||||| ||
Sbjct 3189960 CTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATAGTATCGGACGACTCGACCTCAAG 3190019
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102
||||| ||||| ||||| || ||||| ||
Sbjct 3190020 GGTGATGGTCTTGCCCGTCAGGGTCTTGAC 3190049
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || || || || || ||||| || || ||||| || || | ||||| | || ||
Sbjct 3189622 AGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCC 3189681
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || ||||| || || || ||||| || || | || |||||||||
Sbjct 3189682 TCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 3189741
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| ||||| || ||||| |||||||| || ||||| || |||||||||
Sbjct 3189742 TGAATCTTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGACCTCCAGCGTGATCGTC 3189801
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||| ||||| || || | ||||||
Sbjct 3189802 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833
Score = 96.9 bits (106), Expect = 8e-15
Identities = 184/270 (68%), Gaps = 6/270 (2%)
Strand=Plus/Plus
Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||||||||| | |||| |||||| ||||| |||||||| | ||
Sbjct 2049828 GTTCTTCTGGTTGCTCTTGCGGTTGCA---GGCATCCTTGTAGAGCATGAAGGGGTTGCC 2049884
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209
||||| || ||| |||| ||| | ||| |||| |||||| |||| |||||
Sbjct 2049885 AGTCTCAGTCTGGGCCTCGAGGATGGAGTACCAGAGCTTCTGGGCGCGGATCGTCTTGCG 2049944
Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
| || || ||||||||| | ||| || ||||||| ||| || ||| ||
Sbjct 2049945 ACCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTC 2050004
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
| || || || ||| || ||||| | ||| |||||| |||| | || ||| ||
Sbjct 2050005 GGCAAGGCCAGGGCACTCGTTAGGGCACATGAGGGTCCACTCGCCGTTCTTCTCCACACG 2050064
Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGC 178359
||||||||||| || | | |||||| |||
Sbjct 2050065 CTTCATGAAGAGATCGGGGATCCAGAGGGC 2050094
>seq1
Length=7437554
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | ||||| | ||||| || ||||||||||| ||||| ||
Sbjct 2326939 TTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATC 2326998
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || ||||| || || | || ||||||||||||||||| || || || |||
Sbjct 2326999 AGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 2327058
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||||| ||| || ||||| || ||||| ||||| ||||| || ||||| || ||
Sbjct 2327059 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 2327117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159150930682280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |