Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 7e-17
seq4 89.7 4e-13
>seq3
Length=5313354
Score = 102 bits (112), Expect = 7e-17
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128
||| | ||| | || || |||||||| || || || || || |||| || || || |
Sbjct 4707928 GCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 4707987
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188
|| || ||||| ||||| || || || || ||||||||||||| ||| | || ||| ||
Sbjct 4707988 ATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTT 4708047
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247
|||| ||| || |||| ||| | | | || ||| |||||||| || | ||||
Sbjct 4708048 GTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGA 4708106
Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287
|| | || ||||| || || || || || || ||||||||
Sbjct 4708107 TAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 4708146
>seq4
Length=5284358
Score = 89.7 bits (98), Expect = 4e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
||| || || || ||||| ||| || || || | || || ||||| || || || ||
Sbjct 3189414 CTCCTTCTGGATGTTATAGTCGCTGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAA 3189473
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
||||||||||||||||| | || | | ||| |||||| || || || | |||
Sbjct 3189474 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCA-CGT 3189532
Query 39213 CGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271
| || ||| |||||||||||||| || | |||||| | || || ||||| || || |
Sbjct 3189533 TGTCAATCGTGTCGCTCGACTCCACCTCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGA 3189592
Query 39272 CAAAGATTTGCAT 39284
| ||||| |||||
Sbjct 3189593 CGAAGATCTGCAT 3189605
Score = 89.7 bits (98), Expect = 4e-13
Identities = 149/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||| | ||| ||||| ||| || || || || || |||| || || || |||| ||
Sbjct 3189624 CACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTC 3189683
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| || || ||||| || |||||||||||||||| || | || ||| ||||||
Sbjct 3189684 GAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTG 3189743
Query 39195 GAT-TTTCTGTT-TGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252
|| || || || | |||| | ||| || ||||| || |||| |||||| |
Sbjct 3189744 AATCTTGCTCTTCACATTGTCG--ATCGTGTCAGATGACTCGACCTCCAGCGTGATCGTC 3189801
Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| ||||| || || || || ||||| |||||
Sbjct 3189802 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833
Score = 82.4 bits (90), Expect = 7e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||| ||| || || || || ||||||| ||| || || |||| ||||||||
Sbjct 3190143 TGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCGTCCTCAAGCTGC 3190202
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| || || || || ||||||||||||| || | || ||| |||||| ||| |||
Sbjct 3190203 TTGCCAGCGAAAATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 3190262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429545223073736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |