Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq4 98.7 7e-16
seq3 82.4 5e-11
>seq4
Length=5284358
Score = 98.7 bits (108), Expect = 7e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||||||||| || |||||||| || || || || || |
Sbjct 3189833 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTCGAGTCATCT 3189774
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || ||| ||||| || || | ||||| || ||
Sbjct 3189773 GACACGATCGACAATGTGAAGA-GCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCA 3189715
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||| || || || || || |||| ||||| | ||| |||||
Sbjct 3189714 GCAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAA 3189655
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 3189654 CATTCAGAAGGAGTCGAC 3189637
>seq3
Length=5313354
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| || ||||||||||| || || ||||| ||||| || || ||
Sbjct 4708146 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 4708087
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| | || | | || || || ||||| || || | || || ||
Sbjct 4708086 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 4708027
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||||| | || || |||||||| || || || || | ||||| | ||| |||
Sbjct 4708026 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 4707967
Query 23788 AACATACAAAAAGAG 23802
||||| || || |||
Sbjct 4707966 AACATCCAGAAGGAG 4707952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009303396576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |