Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 3e-27
>seq1
Length=7437554
Score = 136 bits (150), Expect = 3e-27
Identities = 192/265 (72%), Gaps = 5/265 (2%)
Strand=Plus/Minus
Query 27048 GAAATCCTCTGCCTTAAAGTCGTCCAGGCTC--TCCACCCTCC-TGTTTATCCTCAGTGT 27104
||||||||| ||| | |||| | |||| ||| ||||| | | ||| |||
Sbjct 5295062 GAAATCCTCCATCTTCCACCCGTCGATGCTCCCTCCCGCCTCCCTCGTAATCTCCAGCAC 5295003
Query 27105 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTA 27164
||| ||| | |||||| | ||| ||||| |||| |||| || ||||| || |||
Sbjct 5295002 GGGGAAGTCCCGGGGCTCGCGCTCCAGCTGCGTCTCGAGCGCCTCGACGTGGTCGCAGTA 5294943
Query 27165 GACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 27223
|||||| ||||| |||| | ||| | || || ||||| | ||| || |||||| |
Sbjct 5294942 GACGTGGGCGTCGCCCATGACGTGCGTCAGGCTG-CCCGGCACGAGCTCGCAGACGTGCG 5294884
Query 27224 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 27283
| ||||||| ||||||||| | |||||| |||||||| ||||| || ||||| |||||||
Sbjct 5294883 CGATCATGTGCGTGAGGAGCGCGTAGCTCGCGATGTTGAAGGGGACGCCGAGGCCCATGT 5294824
Query 27284 CCCCCGACCTCTGGTAGAGCTGACA 27308
| | || | |||||||||||| ||
Sbjct 5294823 CGCAGGAGCGCTGGTAGAGCTGGCA 5294799
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/229 (71%), Gaps = 8/229 (3%)
Strand=Plus/Minus
Query 27498 GTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 27557
|||||| || || || |||| ||| |||||||||||||| || |||||||| ||| | ||
Sbjct 5294522 GTACTCGGCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCACCTC 5294463
Query 27558 CCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 27617
||||||| || |||| |||||| || || | || |||||| ||||||||||
Sbjct 5294462 CCTGTGCGAGAGGCCCACGCTGTCCAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATGCG 5294403
Query 27618 TA--CCCCCTTCTCGGAGAGC--TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCA 27673
| ||| | || | ||| || | | || | ||| |||| || |||||| || |
Sbjct 5294402 CACGCCCGCGTCGCTGAGGGCGAGCGACGACGTGT-TGG--CCTC-GATGAACCAGAGGA 5294347
Query 27674 GCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722
|||| | | |||||| ||||| | ||| ||||||||||||||
Sbjct 5294346 GCTCGGCGAGGACGGCGCGGGTGAAGACGCGCTTCGTCGTGAGGAGGGG 5294298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369506875757432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |