Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 4e-18
seq4 100 7e-16
seq1 89.7 1e-12
>seq3
Length=5313354
Score = 107 bits (118), Expect = 4e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || || || || || ||| || ||||||||||| |||| | || | |||||
Sbjct 4707931 GAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 4707990
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| || | ||||||||| | | ||| || ||||| ||
Sbjct 4707991 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 4708050
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || ||||| | || | | |||| ||| ||| || || || || |||||
Sbjct 4708051 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGT 4708110
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
|| |||||||| ||||| ||||| | |||||| || ||
Sbjct 4708111 CTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGCC 4708149
>seq4
Length=5284358
Score = 100 bits (110), Expect = 7e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || ||||| || ||||| || || ||||||||||||| | |||| || ||
Sbjct 3189849 GAGGACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGAGAGGGTTCGGCCGTC 3189908
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || |||||||| || | |||||| |||| | ||| || ||||| ||
Sbjct 3189909 CTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTC 3189968
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||||| || || ||| | || | | || || ||| || ||||| || || ||
Sbjct 3189969 CTGAATCTTCGACTTAACATTGTCGATAGTATCGGACGACTCGACCTCAAGGGTGATGGT 3190028
Query 152072 TTTGCCCGTGAGAGTCTTCACGA 152094
|||||||| || ||||| ||||
Sbjct 3190029 CTTGCCCGTCAGGGTCTTGACGA 3190051
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||||||||| || |||||||| || |||||||| || ||| | || | |||||
Sbjct 3189394 AGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTATAGTCGCTGAGGGTGCGACCATCC 3189453
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || ||||||||||| | ||||||||| | | || || ||||| ||
Sbjct 3189454 TCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 3189513
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || || || | || | |||| ||| || || || || |||||
Sbjct 3189514 TGAATCTTGCTCTTCACGTTGTCAATCGTGTCGCTCGACTCCACCTCTAGGGTGATAGTC 3189573
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || || ||||| ||||||| ||||||
Sbjct 3189574 TTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3189605
>seq1
Length=7437554
Score = 89.7 bits (98), Expect = 1e-12
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| || | | || | ||||| || || || |||||||| ||
Sbjct 2326939 TTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATC 2326998
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||| | | ||| || ||||| || || || || |||||| | ||
Sbjct 2326999 AGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 2327058
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095
| | |||| || ||| || ||||| || || || |||||||| || |||||||||||
Sbjct 2327059 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 2327117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153819735600312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |