Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3 187 5e-42 seq4 163 6e-35 seq1 143 6e-29 >seq3 Length=5313354 Score = 187 bits (206), Expect = 5e-42 Identities = 180/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | ||||| || || |||||||||||||| | Sbjct 4707916 ACCACCACGCAGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 4707975 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| ||||||| || || ||||| || Sbjct 4707976 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGG 4708035 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | ||||| ||||| |||| || || Sbjct 4708036 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 4708095 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| ||||| ||||| | ||||| ||||| |||||||| || Sbjct 4708096 CTCGAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 4708146 >seq4 Length=5284358 Score = 163 bits (180), Expect = 6e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || ||||| | ||| || || || ||||||||||| | Sbjct 3189606 ACCACCACGCAGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGA 3189665 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || |||||||| | ||| || ||||| ||| Sbjct 3189666 GAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGG 3189725 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || ||||||||||| || ||| ||||| || || | ||||| ||||| || | |||| Sbjct 3189726 GATGCCCTCCTTGTCCTGAATC-TTGCTCTTCACATTGTCGATCGTGTCAGATGACTCGA 3189784 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||||||||||||||| | ||||| ||||| |||||||| Sbjct 3189785 CCTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833 Score = 134 bits (148), Expect = 3e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| || ||||| | || || || |||||||| ||||| Sbjct 3189379 CCGCCACGAAGACGAAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTATAGTCGCTG 3189438 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| || || || || || ||||| | ||| || |||||| ||| Sbjct 3189439 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 3189498 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| || ||| ||||| || ||| | || || ||||| | || || Sbjct 3189499 ATACCCTCCTTGTCCTGAATC-TTGCTCTTCACGTTGTCAATCGTGTCGCTCGACTCCAC 3189557 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 3189558 CTCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3189605 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || ||||| || | |||| || || || |||||||| || | Sbjct 3189834 ACCACCACGAAGGCGGAGGACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGA 3189893 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || || || ||||||| || || || || || Sbjct 3189894 GAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGG 3189953 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| | || || | |||||||| || || | ||||| Sbjct 3189954 GATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATAGTATCGGACGACTCGAC 3190013 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 || || ||||| ||||| ||||||| ||||| |||| Sbjct 3190014 CTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 3190051 Score = 123 bits (136), Expect = 5e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || || || || || | ||| || || ||||||||||| || | | Sbjct 3190119 CCACCGCGGAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAA 3190178 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || || || || || | || || ||||| || Sbjct 3190179 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCGGGAGGG 3190238 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || ||| | |||||||| ||||| | ||||| Sbjct 3190239 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCCGAGGACTCGACC 3190298 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 3190299 TCGAGGGTGATGGTCTTGCCAGT 3190321 >seq1 Length=7437554 Score = 143 bits (158), Expect = 6e-29 Identities = 144/187 (77%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 282904 TGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGG 282963 |||| | || |||||||||||||||| || |||||||||||||| || || || |||| Sbjct 2326931 TGCTAACCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGG 2326990 Query 282964 CAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTA 283023 | || |||| || || ||||| || || ||||||||||| |||||||| | || | Sbjct 2326991 CGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA 2327050 Query 283024 CGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCT 283083 | | ||||| |||||||| | ||||| || || ||||| ||||| ||||||| |||| Sbjct 2327051 CATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCT 2327110 Query 283084 TAACGAA 283090 | ||||| Sbjct 2327111 TCACGAA 2327117 Score = 109 bits (120), Expect = 1e-18 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| || ||| ||| |||| ||| || |||||||||| || | |||||| Sbjct 4690644 AGGAGTTCCTTACCGAGGCTCTTCCCTGCGCCCTGCTCGGCATGAACGCCAACCTCATGA 4690585 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 ||| || || || ||||| || || ||| | |||| || || || ||||||| | | Sbjct 4690584 AGCAGTACATTGAGTTCGTCGCCGACCGTCTCCTCGTCGCCCTTGGCAACGAGAAGATCT 4690525 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | || ||| |||||||||| || |||||| ||| || || || || || |||| Sbjct 4690524 ACAAGTCCTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACT 4690465 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| ||||| ||| ||| || || | | | ||||| Sbjct 4690464 TCTTCGAGAAGCGCGTCGCCGACTACCAGAAGGCTGGTGT 4690425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738234383088